RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 DHX40Q8IX18 779 aaKnown RBP16.07■□□□□ 0.16
PAX6-280ENST00000640872 ZNF397Q8NF99 534 aaPredicted RBP16.07■□□□□ 0.16
PAX6-280ENST00000640872 GOLPH3LQ9H4A5 285 aa16.07■□□□□ 0.16
PAX6-280ENST00000640872 RCOR1Q9UKL0 485 aa16.07■□□□□ 0.16
PAX6-280ENST00000640872 ZNF215Q9UL58 517 aaPredicted RBP16.07■□□□□ 0.16
PAX6-280ENST00000640872 RGPD2P0DJD1 1756 aa16.07■□□□□ 0.16
PAX6-280ENST00000640872 CCDC69A6NI79 296 aa16.07■□□□□ 0.16
PAX6-280ENST00000640872 SNW1Q13573 536 aaKnown RBP16.07■□□□□ 0.16
PAX6-280ENST00000640872 KMT5BQ4FZB7 885 aa16.07■□□□□ 0.16
PAX6-280ENST00000640872 ZNF530Q6P9A1 599 aaPredicted RBP16.07■□□□□ 0.16
PAX6-280ENST00000640872 MPRIPQ6WCQ1 1025 aa16.07■□□□□ 0.16
PAX6-280ENST00000640872 DDX17Q92841 729 aaKnown RBP16.07■□□□□ 0.16
PAX6-280ENST00000640872 OVOS2A0A0G2JMS6 1433 aa16.06■□□□□ 0.16
PAX6-280ENST00000640872 GCP02774 474 aa16.06■□□□□ 0.16
PAX6-280ENST00000640872 SLFN14P0C7P3 912 aa16.06■□□□□ 0.16
PAX6-280ENST00000640872 SCRN1Q12765 414 aa16.06■□□□□ 0.16
PAX6-280ENST00000640872 CCAR1Q8IX12 1150 aaKnown RBP16.06■□□□□ 0.16
PAX6-280ENST00000640872 EDC3Q96F86 508 aaKnown RBP16.06■□□□□ 0.16
PAX6-280ENST00000640872 SIL1Q9H173 461 aa16.06■□□□□ 0.16
PAX6-280ENST00000640872 USP16Q9Y5T5 823 aa16.06■□□□□ 0.16
PAX6-280ENST00000640872 ERBB3P21860 1342 aa16.06■□□□□ 0.16
PAX6-280ENST00000640872 RFX7Q2KHR2 1363 aa16.06■□□□□ 0.16
PAX6-280ENST00000640872 NAA16Q6N069 864 aaPredicted RBP16.06■□□□□ 0.16
PAX6-280ENST00000640872 ZNF771Q7L3S4 317 aaPredicted RBP16.06■□□□□ 0.16
PAX6-280ENST00000640872 FAM53CQ9NYF3 392 aa16.06■□□□□ 0.16
PAX6-280ENST00000640872 AXIN2Q9Y2T1 843 aa16.06■□□□□ 0.16
PAX6-280ENST00000640872 PXDNQ92626 1479 aa16.06■□□□□ 0.16
PAX6-280ENST00000640872 PRAMEF22A3QJZ6 481 aa16.05■□□□□ 0.16
PAX6-280ENST00000640872 RNMTO43148 476 aaKnown RBP16.05■□□□□ 0.16
PAX6-280ENST00000640872 CCAR2Q8N163 923 aaKnown RBP16.05■□□□□ 0.16
PAX6-280ENST00000640872 ENGASEQ8NFI3 743 aa16.05■□□□□ 0.16
PAX6-280ENST00000640872 KLHDC4Q8TBB5 520 aa16.05■□□□□ 0.16
PAX6-280ENST00000640872 ERO1AQ96HE7 468 aa16.05■□□□□ 0.16
PAX6-280ENST00000640872 LLPHQ9BRT6 129 aaKnown RBP16.05■□□□□ 0.16
PAX6-280ENST00000640872 ZNF609O15014 1411 aa16.05■□□□□ 0.16
PAX6-280ENST00000640872 HSP90B1P14625 803 aaKnown RBP16.05■□□□□ 0.16
PAX6-280ENST00000640872 CEBPZQ03701 1054 aaKnown RBP16.05■□□□□ 0.16
PAX6-280ENST00000640872 FTOQ9C0B1 505 aaKnown RBP eCLIP16.05■□□□□ 0.16
PAX6-280ENST00000640872 U3KPZ7 1027 aaPredicted RBP16.05■□□□□ 0.16
PAX6-280ENST00000640872 BECN2A8MW95 431 aa16.04■□□□□ 0.16
PAX6-280ENST00000640872 PFKFB2O60825 505 aa16.04■□□□□ 0.16
PAX6-280ENST00000640872 CYP21A2P08686 494 aa16.04■□□□□ 0.16
PAX6-280ENST00000640872 SLFNL1Q499Z3 407 aa16.04■□□□□ 0.16
PAX6-280ENST00000640872 NSUN7Q8NE18 718 aaKnown RBP16.04■□□□□ 0.16
PAX6-280ENST00000640872 ANO10Q9NW15 660 aa16.04■□□□□ 0.16
PAX6-280ENST00000640872 IGKV5-2P06315 115 aa16.04■□□□□ 0.16
PAX6-280ENST00000640872 ATP5JP18859 108 aa16.04■□□□□ 0.16
PAX6-280ENST00000640872 FILIP1Q7Z7B0 1213 aa16.04■□□□□ 0.16
PAX6-280ENST00000640872 KRT222Q8N1A0 295 aa16.04■□□□□ 0.16
PAX6-280ENST00000640872 SIPA1L3O60292 1781 aaPredicted RBP16.03■□□□□ 0.16
PAX6-280ENST00000640872 LAMA4Q16363 1823 aa16.03■□□□□ 0.16
PAX6-280ENST00000640872 PHRF1Q9P1Y6 1649 aaKnown RBP16.03■□□□□ 0.16
PAX6-280ENST00000640872 FAM160A1Q05DH4 1040 aa16.03■□□□□ 0.16
PAX6-280ENST00000640872 PLEKHO1Q53GL0 409 aaPredicted RBP16.03■□□□□ 0.16
PAX6-280ENST00000640872 TAF3Q5VWG9 929 aa16.03■□□□□ 0.16
PAX6-280ENST00000640872 CCDC73Q6ZRK6 1079 aa16.03■□□□□ 0.16
PAX6-280ENST00000640872 ARHGEF25Q86VW2 580 aa16.03■□□□□ 0.16
PAX6-280ENST00000640872 USP28Q96RU2 1077 aa16.03■□□□□ 0.16
PAX6-280ENST00000640872 DBNLQ9UJU6 430 aaKnown RBP16.03■□□□□ 0.16
PAX6-280ENST00000640872 A0A087WWV3 80 aa16.02■□□□□ 0.16
PAX6-280ENST00000640872 CTDNEP1O95476 244 aa16.02■□□□□ 0.16
PAX6-280ENST00000640872 DDX58O95786 925 aaKnown RBP16.02■□□□□ 0.16
PAX6-280ENST00000640872 FBXO38Q6PIJ6 1188 aa16.02■□□□□ 0.16
PAX6-280ENST00000640872 KCNH5Q8NCM2 988 aa16.02■□□□□ 0.16
PAX6-280ENST00000640872 DDX21Q9NR30 783 aaKnown RBP eCLIP16.02■□□□□ 0.16
PAX6-280ENST00000640872 KINO60870 393 aaKnown RBP16.02■□□□□ 0.15
PAX6-280ENST00000640872 TERF2Q15554 542 aa16.02■□□□□ 0.15
PAX6-280ENST00000640872 ELF2Q15723 593 aa16.02■□□□□ 0.15
PAX6-280ENST00000640872 ATL3Q6DD88 541 aa16.02■□□□□ 0.15
PAX6-280ENST00000640872 CCDC129Q6ZRS4 1044 aa16.02■□□□□ 0.15
PAX6-280ENST00000640872 STOX1Q6ZVD7 989 aa16.02■□□□□ 0.15
PAX6-280ENST00000640872 KRT28Q7Z3Y7 464 aa16.02■□□□□ 0.15
PAX6-280ENST00000640872 OSBPL5Q9H0X9 879 aaPredicted RBP16.02■□□□□ 0.15
PAX6-280ENST00000640872 TRMT1Q9NXH9 659 aaKnown RBP16.02■□□□□ 0.15
PAX6-280ENST00000640872 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.02■□□□□ 0.15
PAX6-280ENST00000640872 V9GYY5 206 aaPredicted RBP16.02■□□□□ 0.15
PAX6-280ENST00000640872 ABCC6O95255 1503 aa16.02■□□□□ 0.15
PAX6-280ENST00000640872 SLU7O95391 586 aaKnown RBP16.01■□□□□ 0.15
PAX6-280ENST00000640872 CHGBP05060 677 aa16.01■□□□□ 0.15
PAX6-280ENST00000640872 GSDMDP57764 484 aa16.01■□□□□ 0.15
PAX6-280ENST00000640872 PDIA6Q15084 440 aa16.01■□□□□ 0.15
PAX6-280ENST00000640872 NBPF11Q86T75 865 aa16.01■□□□□ 0.15
PAX6-280ENST00000640872 CEP57L1Q8IYX8 460 aa16.01■□□□□ 0.15
PAX6-280ENST00000640872 LRRC2Q9BYS8 371 aa16.01■□□□□ 0.15
PAX6-280ENST00000640872 BCL11BQ9C0K0 894 aaPredicted RBP16.01■□□□□ 0.15
PAX6-280ENST00000640872 PTPDC1A2A3K4 754 aa16.01■□□□□ 0.15
PAX6-280ENST00000640872 KIF2AO00139 706 aaPredicted RBP16.01■□□□□ 0.15
PAX6-280ENST00000640872 AMOTQ4VCS5 1084 aa16.01■□□□□ 0.15
PAX6-280ENST00000640872 EPHA10Q5JZY3 1008 aa16.01■□□□□ 0.15
PAX6-280ENST00000640872 AOPEPQ8N6M6 819 aa16.01■□□□□ 0.15
PAX6-280ENST00000640872 SEC62Q99442 399 aaKnown RBP16.01■□□□□ 0.15
PAX6-280ENST00000640872 SALL1Q9NSC2 1324 aa16■□□□□ 0.15
PAX6-280ENST00000640872 ZNF396Q96N95 335 aaPredicted RBP16■□□□□ 0.15
PAX6-280ENST00000640872 COPRSQ9NQ92 184 aa16■□□□□ 0.15
PAX6-280ENST00000640872 LMTK3Q96Q04 1460 aa16■□□□□ 0.15
PAX6-280ENST00000640872 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16■□□□□ 0.15
PAX6-280ENST00000640872 ZC3H6P61129 1189 aaKnown RBP16■□□□□ 0.15
PAX6-280ENST00000640872 AIMP1Q12904 312 aaKnown RBP16■□□□□ 0.15
PAX6-280ENST00000640872 MCMDC2Q4G0Z9 681 aa16■□□□□ 0.15
PAX6-280ENST00000640872 TNNI3KQ59H18 835 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms