RNA–Protein interactions for RNA: ENST00000640765.1

TRPS1-212, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2 BASIC

Gene TRPS1, Length 9,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-212ENST00000640765 MYH9P35579 1960 aaKnown RBP9.57□□□□□ -0.88
TRPS1-212ENST00000640765 TERF1P54274 439 aa9.57□□□□□ -0.88
TRPS1-212ENST00000640765 INF2Q27J81 1249 aa9.57□□□□□ -0.88
TRPS1-212ENST00000640765 CHD1LQ86WJ1 897 aa9.57□□□□□ -0.88
TRPS1-212ENST00000640765 NRBF2Q96F24 287 aa9.57□□□□□ -0.88
TRPS1-212ENST00000640765 UIMC1Q96RL1 719 aa9.57□□□□□ -0.88
TRPS1-212ENST00000640765 TUBB2AQ13885 445 aa9.57□□□□□ -0.88
TRPS1-212ENST00000640765 TCERG1LQ5VWI1 586 aa9.57□□□□□ -0.88
TRPS1-212ENST00000640765 TUBB2BQ9BVA1 445 aa9.57□□□□□ -0.88
TRPS1-212ENST00000640765 LMNB2Q03252 620 aa9.57□□□□□ -0.88
TRPS1-212ENST00000640765 PPP1R21Q6ZMI0 780 aa9.57□□□□□ -0.88
TRPS1-212ENST00000640765 PNMA8AQ86V59 439 aaPredicted RBP9.57□□□□□ -0.88
TRPS1-212ENST00000640765 PAWRQ96IZ0 340 aaKnown RBP9.57□□□□□ -0.88
TRPS1-212ENST00000640765 IWS1Q96ST2 819 aa9.57□□□□□ -0.88
TRPS1-212ENST00000640765 CCDC68Q9H2F9 335 aa9.57□□□□□ -0.88
TRPS1-212ENST00000640765 APOEP02649 317 aa9.57□□□□□ -0.88
TRPS1-212ENST00000640765 SKOR1P84550 965 aa9.57□□□□□ -0.88
TRPS1-212ENST00000640765 IFT81Q8WYA0 676 aa9.57□□□□□ -0.88
TRPS1-212ENST00000640765 CSRNP2Q9H175 543 aa9.57□□□□□ -0.88
TRPS1-212ENST00000640765 SRGAP1Q7Z6B7 1085 aa9.57□□□□□ -0.88
TRPS1-212ENST00000640765 SDCCAG3Q96C92 435 aa9.57□□□□□ -0.88
TRPS1-212ENST00000640765 EHMT1Q9H9B1 1298 aa9.57□□□□□ -0.88
TRPS1-212ENST00000640765 CNNM1Q9NRU3 951 aa9.57□□□□□ -0.88
TRPS1-212ENST00000640765 TCP11L1Q9NUJ3 509 aa9.57□□□□□ -0.88
TRPS1-212ENST00000640765 POLA1P09884 1462 aaPredicted RBP9.56□□□□□ -0.88
TRPS1-212ENST00000640765 RUFY4Q6ZNE9 571 aa9.56□□□□□ -0.88
TRPS1-212ENST00000640765 GOLGA4Q13439 2230 aaKnown RBP9.56□□□□□ -0.88
TRPS1-212ENST00000640765 LMNAP02545 664 aaKnown RBP9.56□□□□□ -0.88
TRPS1-212ENST00000640765 ZKSCAN8Q15776 578 aaPredicted RBP9.56□□□□□ -0.88
TRPS1-212ENST00000640765 SYCP3Q8IZU3 236 aa9.56□□□□□ -0.88
TRPS1-212ENST00000640765 PUF60Q9UHX1 559 aaKnown RBP9.56□□□□□ -0.88
TRPS1-212ENST00000640765 TRAK1Q9UPV9 953 aa9.56□□□□□ -0.88
TRPS1-212ENST00000640765 KIF21BO75037 1637 aa9.56□□□□□ -0.88
TRPS1-212ENST00000640765 ESRRGP62508 458 aa9.56□□□□□ -0.88
TRPS1-212ENST00000640765 LRSAM1Q6UWE0 723 aa9.56□□□□□ -0.88
TRPS1-212ENST00000640765 FAM169AQ9Y6X4 670 aa9.56□□□□□ -0.88
TRPS1-212ENST00000640765 AKNAQ7Z591 1439 aa9.56□□□□□ -0.88
TRPS1-212ENST00000640765 RPGRIP1Q96KN7 1286 aa9.56□□□□□ -0.88
TRPS1-212ENST00000640765 VEZTQ9HBM0 779 aa9.56□□□□□ -0.88
TRPS1-212ENST00000640765 SMIM23A6NLE4 172 aa9.56□□□□□ -0.88
TRPS1-212ENST00000640765 RAB11FIP3O75154 756 aa9.56□□□□□ -0.88
TRPS1-212ENST00000640765 ACTN4O43707 911 aaKnown RBP9.56□□□□□ -0.88
TRPS1-212ENST00000640765 ZRANB2O95218 330 aaKnown RBP eCLIP9.56□□□□□ -0.88
TRPS1-212ENST00000640765 CUL4BQ13620 913 aa9.56□□□□□ -0.88
TRPS1-212ENST00000640765 CCDC25Q86WR0 208 aa9.56□□□□□ -0.88
TRPS1-212ENST00000640765 ZKSCAN5Q9Y2L8 839 aa9.56□□□□□ -0.88
TRPS1-212ENST00000640765 N4BP3O15049 544 aa9.56□□□□□ -0.88
TRPS1-212ENST00000640765 ZSCAN23Q3MJ62 389 aa9.56□□□□□ -0.88
TRPS1-212ENST00000640765 BAG1Q99933 345 aaPredicted RBP9.56□□□□□ -0.88
TRPS1-212ENST00000640765 TTC19Q6DKK2 380 aaPredicted RBP9.55□□□□□ -0.88
TRPS1-212ENST00000640765 CWC27Q6UX04 472 aaKnown RBP9.55□□□□□ -0.88
TRPS1-212ENST00000640765 VSIG1Q86XK7 387 aa9.55□□□□□ -0.88
TRPS1-212ENST00000640765 FSIP1Q8NA03 581 aa9.55□□□□□ -0.88
TRPS1-212ENST00000640765 EXOC1Q9NV70 894 aa9.55□□□□□ -0.88
TRPS1-212ENST00000640765 SCHIP1Q9P0W5 487 aaPredicted RBP9.55□□□□□ -0.88
TRPS1-212ENST00000640765 ERCC6Q03468 1493 aa9.55□□□□□ -0.88
TRPS1-212ENST00000640765 ARHGEF9O43307 516 aa9.55□□□□□ -0.88
TRPS1-212ENST00000640765 SYT1P21579 422 aa9.55□□□□□ -0.88
TRPS1-212ENST00000640765 TMEM87AQ8NBN3 555 aa9.55□□□□□ -0.88
TRPS1-212ENST00000640765 WDR46O15213 610 aaKnown RBP9.55□□□□□ -0.88
TRPS1-212ENST00000640765 CABS1Q96KC9 395 aa9.55□□□□□ -0.88
TRPS1-212ENST00000640765 ANKFY1Q9P2R3 1169 aa9.55□□□□□ -0.88
TRPS1-212ENST00000640765 SNCBQ16143 134 aa9.55□□□□□ -0.88
TRPS1-212ENST00000640765 KLHL40Q2TBA0 621 aa9.55□□□□□ -0.88
TRPS1-212ENST00000640765 CENPKQ9BS16 269 aa9.55□□□□□ -0.88
TRPS1-212ENST00000640765 HMGXB3Q12766 1538 aa9.55□□□□□ -0.88
TRPS1-212ENST00000640765 E9PMD0 336 aa9.55□□□□□ -0.88
TRPS1-212ENST00000640765 STX6O43752 255 aa9.55□□□□□ -0.88
TRPS1-212ENST00000640765 FNBP4Q8N3X1 1017 aaPredicted RBP9.55□□□□□ -0.88
TRPS1-212ENST00000640765 ABTB1Q969K4 478 aaPredicted RBP9.55□□□□□ -0.88
TRPS1-212ENST00000640765 SMG6Q86US8 1419 aaKnown RBP9.55□□□□□ -0.88
TRPS1-212ENST00000640765 CARMIL2Q6F5E8 1435 aa9.54□□□□□ -0.88
TRPS1-212ENST00000640765 MAK16Q9BXY0 300 aaKnown RBP9.54□□□□□ -0.88
TRPS1-212ENST00000640765 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.54□□□□□ -0.88
TRPS1-212ENST00000640765 USP5P45974 858 aa9.54□□□□□ -0.88
TRPS1-212ENST00000640765 PDZD8Q8NEN9 1154 aa9.54□□□□□ -0.88
TRPS1-212ENST00000640765 CCDC124Q96CT7 223 aaKnown RBP9.54□□□□□ -0.88
TRPS1-212ENST00000640765 RILPL1Q5EBL4 403 aa9.54□□□□□ -0.88
TRPS1-212ENST00000640765 IFT20Q8IY31 132 aa9.54□□□□□ -0.88
TRPS1-212ENST00000640765 LONP1P36776 959 aaKnown RBP9.54□□□□□ -0.88
TRPS1-212ENST00000640765 TTC16Q8NEE8 873 aa9.54□□□□□ -0.88
TRPS1-212ENST00000640765 BAIAP2L1Q9UHR4 511 aa9.54□□□□□ -0.88
TRPS1-212ENST00000640765 NUDCD3Q8IVD9 361 aa9.54□□□□□ -0.88
TRPS1-212ENST00000640765 NOB1Q9ULX3 412 aaKnown RBP9.54□□□□□ -0.88
TRPS1-212ENST00000640765 RIPOR2Q9Y4F9 1068 aa9.54□□□□□ -0.88
TRPS1-212ENST00000640765 BAG4O95429 457 aaKnown RBP9.54□□□□□ -0.88
TRPS1-212ENST00000640765 HNRNPMP52272 730 aaKnown RBP eCLIP9.54□□□□□ -0.88
TRPS1-212ENST00000640765 TNPO1Q92973 898 aaKnown RBP9.54□□□□□ -0.88
TRPS1-212ENST00000640765 KRT3P12035 628 aa9.54□□□□□ -0.88
TRPS1-212ENST00000640765 ITIH3Q06033 890 aa9.54□□□□□ -0.88
TRPS1-212ENST00000640765 ATP6V0A2Q9Y487 856 aa9.54□□□□□ -0.88
TRPS1-212ENST00000640765 ORC6Q9Y5N6 252 aa9.54□□□□□ -0.88
TRPS1-212ENST00000640765 PDS5BQ9NTI5 1447 aa9.54□□□□□ -0.88
TRPS1-212ENST00000640765 DHX29Q7Z478 1369 aaKnown RBP9.54□□□□□ -0.88
TRPS1-212ENST00000640765 SPAG1Q07617 926 aa9.53□□□□□ -0.88
TRPS1-212ENST00000640765 MSANTD4Q8NCY6 345 aa9.53□□□□□ -0.88
TRPS1-212ENST00000640765 EPS15L1Q9UBC2 864 aa9.53□□□□□ -0.88
TRPS1-212ENST00000640765 TRIM47Q96LD4 638 aa9.53□□□□□ -0.88
TRPS1-212ENST00000640765 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.53□□□□□ -0.88
TRPS1-212ENST00000640765 GOLGA6BA6NDN3 693 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms