RNA–Protein interactions for RNA: ENST00000640728.1

SPIN3-244, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,954 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-244ENST00000640728 NDUFB9Q9Y6M9 179 aa25.83■■□□□ 1.73
SPIN3-244ENST00000640728 C3orf67Q6ZVT6 689 aa25.82■■□□□ 1.72
SPIN3-244ENST00000640728 MPHOSPH8Q99549 860 aa25.82■■□□□ 1.72
SPIN3-244ENST00000640728 LSG1Q9H089 658 aaKnown RBP25.82■■□□□ 1.72
SPIN3-244ENST00000640728 PLSCR1O15162 318 aa25.82■■□□□ 1.72
SPIN3-244ENST00000640728 CCDC158Q5M9N0 1113 aa25.82■■□□□ 1.72
SPIN3-244ENST00000640728 TPTE2Q6XPS3 522 aa25.82■■□□□ 1.72
SPIN3-244ENST00000640728 LAMB2P55268 1798 aa25.82■■□□□ 1.72
SPIN3-244ENST00000640728 MCCP23508 829 aa25.81■■□□□ 1.72
SPIN3-244ENST00000640728 NMIQ13287 307 aaPredicted RBP25.81■■□□□ 1.72
SPIN3-244ENST00000640728 HSCBQ8IWL3 235 aa25.81■■□□□ 1.72
SPIN3-244ENST00000640728 SNRKQ9NRH2 765 aa25.81■■□□□ 1.72
SPIN3-244ENST00000640728 ABCC12Q96J65 1359 aa25.81■■□□□ 1.72
SPIN3-244ENST00000640728 IFIT1P09914 478 aaKnown RBP25.8■■□□□ 1.72
SPIN3-244ENST00000640728 SSFA2P28290 1259 aa25.8■■□□□ 1.72
SPIN3-244ENST00000640728 IGHMBP2P38935 993 aaKnown RBP25.8■■□□□ 1.72
SPIN3-244ENST00000640728 GORABQ5T7V8 394 aa25.8■■□□□ 1.72
SPIN3-244ENST00000640728 FAM227BQ96M60 508 aa25.8■■□□□ 1.72
SPIN3-244ENST00000640728 RFX7Q2KHR2 1363 aa25.8■■□□□ 1.72
SPIN3-244ENST00000640728 KIAA1211Q6ZU35 1233 aa25.8■■□□□ 1.72
SPIN3-244ENST00000640728 RAD50Q92878 1312 aa25.79■■□□□ 1.72
SPIN3-244ENST00000640728 IL17RAQ96F46 866 aa25.79■■□□□ 1.72
SPIN3-244ENST00000640728 CDC5LQ99459 802 aaKnown RBP25.79■■□□□ 1.72
SPIN3-244ENST00000640728 PAG1Q9NWQ8 432 aa25.79■■□□□ 1.72
SPIN3-244ENST00000640728 FGFR2P21802 821 aa25.78■■□□□ 1.72
SPIN3-244ENST00000640728 ANAPC15P60006 121 aa25.78■■□□□ 1.72
SPIN3-244ENST00000640728 TICAM2Q86XR7 235 aa25.78■■□□□ 1.72
SPIN3-244ENST00000640728 KBTBD3Q8NAB2 608 aa25.78■■□□□ 1.72
SPIN3-244ENST00000640728 HSPA4P34932 840 aa25.78■■□□□ 1.72
SPIN3-244ENST00000640728 NFIXQ14938 502 aa25.78■■□□□ 1.72
SPIN3-244ENST00000640728 PUM3Q15397 648 aaKnown RBP25.78■■□□□ 1.72
SPIN3-244ENST00000640728 TTC39AQ5SRH9 613 aa25.78■■□□□ 1.72
SPIN3-244ENST00000640728 DDX46Q7L014 1031 aaKnown RBP25.78■■□□□ 1.72
SPIN3-244ENST00000640728 FBXO41Q8TF61 875 aa25.78■■□□□ 1.72
SPIN3-244ENST00000640728 C4AP0C0L4 1744 aa25.78■■□□□ 1.72
SPIN3-244ENST00000640728 COL24A1Q17RW2 1714 aa25.78■■□□□ 1.72
SPIN3-244ENST00000640728 EP400Q96L91 3159 aa25.77■■□□□ 1.72
SPIN3-244ENST00000640728 GOLIM4O00461 696 aa25.77■■□□□ 1.72
SPIN3-244ENST00000640728 APBA3O96018 575 aa25.77■■□□□ 1.72
SPIN3-244ENST00000640728 POTEAQ6S8J7 498 aa25.77■■□□□ 1.72
SPIN3-244ENST00000640728 HELBQ8NG08 1087 aaPredicted RBP25.77■■□□□ 1.72
SPIN3-244ENST00000640728 PALD1Q9ULE6 856 aa25.77■■□□□ 1.72
SPIN3-244ENST00000640728 A0A0D9SFI3 127 aa25.76■■□□□ 1.72
SPIN3-244ENST00000640728 CD2BP2O95400 341 aaKnown RBP25.76■■□□□ 1.72
SPIN3-244ENST00000640728 LPIN2Q92539 896 aa25.76■■□□□ 1.72
SPIN3-244ENST00000640728 NLRP3Q96P20 1036 aa25.76■■□□□ 1.72
SPIN3-244ENST00000640728 ZNF512BQ96KM6 892 aaPredicted RBP25.76■■□□□ 1.71
SPIN3-244ENST00000640728 CARMIL3Q8ND23 1372 aa25.75■■□□□ 1.71
SPIN3-244ENST00000640728 GYS1P13807 737 aa25.75■■□□□ 1.71
SPIN3-244ENST00000640728 UBR3Q6ZT12 1888 aa25.75■■□□□ 1.71
SPIN3-244ENST00000640728 ANKRD18AQ8IVF6 992 aa25.75■■□□□ 1.71
SPIN3-244ENST00000640728 PTH1RQ03431 593 aa25.74■■□□□ 1.71
SPIN3-244ENST00000640728 MED23Q9ULK4 1368 aa25.73■■□□□ 1.71
SPIN3-244ENST00000640728 TAF5LO75529 589 aa25.73■■□□□ 1.71
SPIN3-244ENST00000640728 SCARF1Q14162 830 aa25.73■■□□□ 1.71
SPIN3-244ENST00000640728 BSDC1Q9NW68 430 aaPredicted RBP25.73■■□□□ 1.71
SPIN3-244ENST00000640728 FKBP4Q02790 459 aaKnown RBP eCLIP25.72■■□□□ 1.71
SPIN3-244ENST00000640728 CHRNDQ07001 517 aa25.72■■□□□ 1.71
SPIN3-244ENST00000640728 CCDC24Q8N4L8 307 aa25.72■■□□□ 1.71
SPIN3-244ENST00000640728 ANTXR1Q9H6X2 564 aa25.72■■□□□ 1.71
SPIN3-244ENST00000640728 CCDC171Q6TFL3 1326 aa25.72■■□□□ 1.71
SPIN3-244ENST00000640728 SLC5A1P13866 664 aa25.71■■□□□ 1.71
SPIN3-244ENST00000640728 K7ELQ4 463 aaPredicted RBP25.71■■□□□ 1.71
SPIN3-244ENST00000640728 CCDC102BQ68D86 513 aa25.71■■□□□ 1.71
SPIN3-244ENST00000640728 MAP4K1Q92918 833 aa25.71■■□□□ 1.71
SPIN3-244ENST00000640728 COL4A1P02462 1669 aa25.71■■□□□ 1.71
SPIN3-244ENST00000640728 CHGBP05060 677 aa25.7■■□□□ 1.7
SPIN3-244ENST00000640728 TM4SF1P30408 202 aa25.7■■□□□ 1.7
SPIN3-244ENST00000640728 CELF1Q92879 486 aaKnown RBP25.7■■□□□ 1.7
SPIN3-244ENST00000640728 AKT1S1Q96B36 256 aa25.7■■□□□ 1.7
SPIN3-244ENST00000640728 ZNF589Q86UQ0 364 aaPredicted RBP25.69■■□□□ 1.7
SPIN3-244ENST00000640728 SNAP23O00161 211 aa25.69■■□□□ 1.7
SPIN3-244ENST00000640728 ST18O60284 1047 aa25.69■■□□□ 1.7
SPIN3-244ENST00000640728 ARID4AP29374 1257 aaPredicted RBP25.69■■□□□ 1.7
SPIN3-244ENST00000640728 MCAMP43121 646 aa25.69■■□□□ 1.7
SPIN3-244ENST00000640728 ZAP70P43403 619 aa25.69■■□□□ 1.7
SPIN3-244ENST00000640728 PHKA1P46020 1223 aa25.69■■□□□ 1.7
SPIN3-244ENST00000640728 ZNF827Q17R98 1081 aa25.69■■□□□ 1.7
SPIN3-244ENST00000640728 MCMDC2Q4G0Z9 681 aa25.69■■□□□ 1.7
SPIN3-244ENST00000640728 CNBD1Q8NA66 436 aa25.69■■□□□ 1.7
SPIN3-244ENST00000640728 KCNB2Q92953 911 aa25.69■■□□□ 1.7
SPIN3-244ENST00000640728 NPHP1O15259 732 aa25.68■■□□□ 1.7
SPIN3-244ENST00000640728 UQCRFS1P1P0C7P4 283 aa25.68■■□□□ 1.7
SPIN3-244ENST00000640728 RPS8P62241 208 aaKnown RBP25.68■■□□□ 1.7
SPIN3-244ENST00000640728 SPEF2Q9C093 1822 aa25.68■■□□□ 1.7
SPIN3-244ENST00000640728 SNX14Q9Y5W7 946 aa25.68■■□□□ 1.7
SPIN3-244ENST00000640728 NECTIN1Q15223 517 aa25.67■■□□□ 1.7
SPIN3-244ENST00000640728 SLKQ9H2G2 1235 aaPredicted RBP25.67■■□□□ 1.7
SPIN3-244ENST00000640728 HELLSQ9NRZ9 838 aa25.67■■□□□ 1.7
SPIN3-244ENST00000640728 TFCP2L1Q9NZI6 479 aa25.67■■□□□ 1.7
SPIN3-244ENST00000640728 RNF113AO15541 343 aaKnown RBP25.67■■□□□ 1.7
SPIN3-244ENST00000640728 ZMYM1Q5SVZ6 1142 aa25.67■■□□□ 1.7
SPIN3-244ENST00000640728 PRR5LQ6MZQ0 368 aa25.67■■□□□ 1.7
SPIN3-244ENST00000640728 PI16Q6UXB8 463 aa25.67■■□□□ 1.7
SPIN3-244ENST00000640728 RASEFQ8IZ41 740 aa25.67■■□□□ 1.7
SPIN3-244ENST00000640728 SPRYD3Q8NCJ5 442 aa25.67■■□□□ 1.7
SPIN3-244ENST00000640728 MINPP1Q9UNW1 487 aa25.67■■□□□ 1.7
SPIN3-244ENST00000640728 NEK4P51957 841 aa25.66■■□□□ 1.7
SPIN3-244ENST00000640728 SEC62Q99442 399 aaKnown RBP25.66■■□□□ 1.7
SPIN3-244ENST00000640728 RBM8AQ9Y5S9 174 aaKnown RBP25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms