RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 RNMTO43148 476 aaKnown RBP6.47□□□□□ -1.37
SCN3A-210ENST00000640652 SERPINC1P01008 464 aa6.47□□□□□ -1.37
SCN3A-210ENST00000640652 FKBP4Q02790 459 aaKnown RBP eCLIP6.47□□□□□ -1.37
SCN3A-210ENST00000640652 BEND3Q5T5X7 828 aa6.47□□□□□ -1.37
SCN3A-210ENST00000640652 DDX11Q96FC9 970 aa6.47□□□□□ -1.37
SCN3A-210ENST00000640652 CDK5RAP2Q96SN8 1893 aa6.47□□□□□ -1.37
SCN3A-210ENST00000640652 GADD45BO75293 160 aaPredicted RBP6.47□□□□□ -1.37
SCN3A-210ENST00000640652 TNNT1P13805 278 aa6.47□□□□□ -1.37
SCN3A-210ENST00000640652 CCAR1Q8IX12 1150 aaKnown RBP6.47□□□□□ -1.37
SCN3A-210ENST00000640652 TTC12Q9H892 705 aaPredicted RBP6.47□□□□□ -1.37
SCN3A-210ENST00000640652 PAG1Q9NWQ8 432 aa6.47□□□□□ -1.37
SCN3A-210ENST00000640652 FAM160A1Q05DH4 1040 aa6.47□□□□□ -1.37
SCN3A-210ENST00000640652 CEP135Q66GS9 1140 aa6.47□□□□□ -1.37
SCN3A-210ENST00000640652 FEZ1Q99689 392 aa6.47□□□□□ -1.37
SCN3A-210ENST00000640652 ACBD3Q9H3P7 528 aa6.47□□□□□ -1.37
SCN3A-210ENST00000640652 SMAP1Q8IYB5 467 aaPredicted RBP6.47□□□□□ -1.37
SCN3A-210ENST00000640652 DACT1Q9NYF0 836 aa6.47□□□□□ -1.37
SCN3A-210ENST00000640652 A0A087WZG4 1122 aa6.47□□□□□ -1.37
SCN3A-210ENST00000640652 MYO1BO43795 1136 aa6.47□□□□□ -1.37
SCN3A-210ENST00000640652 NAA16Q6N069 864 aaPredicted RBP6.47□□□□□ -1.37
SCN3A-210ENST00000640652 CCDC8Q9H0W5 538 aaPredicted RBP6.47□□□□□ -1.37
SCN3A-210ENST00000640652 TOMM22Q9NS69 142 aa6.47□□□□□ -1.37
SCN3A-210ENST00000640652 CEP131Q9UPN4 1083 aa6.47□□□□□ -1.37
SCN3A-210ENST00000640652 CCDC196A0A1B0GTZ2 297 aa6.47□□□□□ -1.37
SCN3A-210ENST00000640652 EIF4A1P60842 406 aaKnown RBP6.47□□□□□ -1.37
SCN3A-210ENST00000640652 Q6ZUG5 572 aa6.47□□□□□ -1.37
SCN3A-210ENST00000640652 FBXW7Q969H0 707 aa6.47□□□□□ -1.37
SCN3A-210ENST00000640652 MYD88Q99836 296 aa6.47□□□□□ -1.37
SCN3A-210ENST00000640652 CLSTN2Q9H4D0 955 aa6.47□□□□□ -1.37
SCN3A-210ENST00000640652 DDX21Q9NR30 783 aaKnown RBP eCLIP6.47□□□□□ -1.37
SCN3A-210ENST00000640652 DHX32Q7L7V1 743 aaKnown RBP6.46□□□□□ -1.37
SCN3A-210ENST00000640652 FSIP1Q8NA03 581 aa6.46□□□□□ -1.37
SCN3A-210ENST00000640652 RASSF8Q8NHQ8 419 aa6.46□□□□□ -1.37
SCN3A-210ENST00000640652 METTL22Q9BUU2 404 aaPredicted RBP6.46□□□□□ -1.37
SCN3A-210ENST00000640652 PKD1L3Q7Z443 1732 aa6.46□□□□□ -1.37
SCN3A-210ENST00000640652 SMARCE1Q969G3 411 aa6.46□□□□□ -1.37
SCN3A-210ENST00000640652 GTPBP4Q9BZE4 634 aaKnown RBP6.46□□□□□ -1.37
SCN3A-210ENST00000640652 CASZ1Q86V15 1759 aa6.46□□□□□ -1.38
SCN3A-210ENST00000640652 BRF1Q92994 677 aa6.46□□□□□ -1.38
SCN3A-210ENST00000640652 HELLSQ9NRZ9 838 aa6.46□□□□□ -1.38
SCN3A-210ENST00000640652 IL15P40933 162 aaPredicted RBP6.46□□□□□ -1.38
SCN3A-210ENST00000640652 MTX1Q13505 466 aa6.46□□□□□ -1.38
SCN3A-210ENST00000640652 IFNL2Q8IZJ0 200 aa6.46□□□□□ -1.38
SCN3A-210ENST00000640652 MPNDQ8N594 471 aa6.46□□□□□ -1.38
SCN3A-210ENST00000640652 MRPS27Q92552 414 aaKnown RBP6.46□□□□□ -1.38
SCN3A-210ENST00000640652 UBR2Q8IWV8 1755 aa6.46□□□□□ -1.38
SCN3A-210ENST00000640652 ME3Q16798 604 aa6.46□□□□□ -1.38
SCN3A-210ENST00000640652 PI4K2BQ8TCG2 481 aa6.46□□□□□ -1.38
SCN3A-210ENST00000640652 NPHP1O15259 732 aa6.46□□□□□ -1.38
SCN3A-210ENST00000640652 CDC37L1Q7L3B6 337 aa6.46□□□□□ -1.38
SCN3A-210ENST00000640652 IL17REQ8NFR9 667 aa6.46□□□□□ -1.38
SCN3A-210ENST00000640652 LEO1Q8WVC0 666 aaPredicted RBP6.46□□□□□ -1.38
SCN3A-210ENST00000640652 ZMYND15Q9H091 742 aa6.46□□□□□ -1.38
SCN3A-210ENST00000640652 DDX60Q8IY21 1712 aaKnown RBP6.46□□□□□ -1.38
SCN3A-210ENST00000640652 GOLIM4O00461 696 aa6.46□□□□□ -1.38
SCN3A-210ENST00000640652 CDC25BP30305 580 aa6.46□□□□□ -1.38
SCN3A-210ENST00000640652 IMPACTQ9P2X3 320 aa6.46□□□□□ -1.38
SCN3A-210ENST00000640652 CCDC69A6NI79 296 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 SLC3A2P08195 630 aaKnown RBP6.45□□□□□ -1.38
SCN3A-210ENST00000640652 LTKP29376 864 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 EVA1CP58658 441 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 IFIT5Q13325 482 aaKnown RBP6.45□□□□□ -1.38
SCN3A-210ENST00000640652 HSP90B2PQ58FF3 399 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 ZNF790Q6PG37 636 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 DCAF5Q96JK2 942 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 TXLNAP40222 546 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 PROSER2Q86WR7 435 aaPredicted RBP6.45□□□□□ -1.38
SCN3A-210ENST00000640652 SRRTQ9BXP5 876 aaKnown RBP6.45□□□□□ -1.38
SCN3A-210ENST00000640652 ZDHHC9Q9Y397 364 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 RPAP1Q9BWH6 1393 aaPredicted RBP6.45□□□□□ -1.38
SCN3A-210ENST00000640652 ALS2Q96Q42 1657 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 CWF19L2Q2TBE0 894 aaKnown RBP6.45□□□□□ -1.38
SCN3A-210ENST00000640652 VPS37DQ86XT2 251 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 NECAB1Q8N987 351 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 NCOA7Q8NI08 942 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 SKILP12757 684 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 FILIP1Q7Z7B0 1213 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 XAGE3Q8WTP9 111 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 GNL3LQ9NVN8 582 aaKnown RBP6.45□□□□□ -1.38
SCN3A-210ENST00000640652 IFIT1P09914 478 aaKnown RBP6.45□□□□□ -1.38
SCN3A-210ENST00000640652 SNW1Q13573 536 aaKnown RBP6.45□□□□□ -1.38
SCN3A-210ENST00000640652 AMOTL1Q8IY63 956 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 SH3TC1Q8TE82 1336 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 SLIT3O75094 1523 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 TJP1Q07157 1748 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 PCDH11XQ9BZA7 1347 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 PCDH11YQ9BZA8 1340 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 HSP90AB3PQ58FF7 597 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 LARP6Q9BRS8 491 aaKnown RBP6.45□□□□□ -1.38
SCN3A-210ENST00000640652 GIGYF1O75420 1035 aaPredicted RBP6.45□□□□□ -1.38
SCN3A-210ENST00000640652 ATP5JP18859 108 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 ZNF75DP51815 510 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 TUBB4BP68371 445 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 CFAP100Q494V2 611 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 IQCEQ6IPM2 695 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 KRT222Q8N1A0 295 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 AIDAQ96BJ3 306 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 AK7Q96M32 723 aa6.45□□□□□ -1.38
SCN3A-210ENST00000640652 CCAR2Q8N163 923 aaKnown RBP6.44□□□□□ -1.38
SCN3A-210ENST00000640652 CNNM1Q9NRU3 951 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms