RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 RTN1Q16799 776 aa12.72□□□□□ -0.37
SCN1B-208ENST00000640135 DCTPP1Q9H773 170 aa12.72□□□□□ -0.37
SCN1B-208ENST00000640135 KDM6BO15054 1643 aa12.72□□□□□ -0.37
SCN1B-208ENST00000640135 PER1O15534 1290 aaPredicted RBP12.72□□□□□ -0.37
SCN1B-208ENST00000640135 TNNT3P45378 269 aaPredicted RBP12.72□□□□□ -0.37
SCN1B-208ENST00000640135 EIF6P56537 245 aaKnown RBP12.72□□□□□ -0.37
SCN1B-208ENST00000640135 USP37Q86T82 979 aa12.72□□□□□ -0.37
SCN1B-208ENST00000640135 SLC26A6Q9BXS9 759 aa12.72□□□□□ -0.37
SCN1B-208ENST00000640135 SEPT11Q9NVA2 429 aaKnown RBP12.72□□□□□ -0.37
SCN1B-208ENST00000640135 CHL1O00533 1208 aa12.71□□□□□ -0.37
SCN1B-208ENST00000640135 NEBLO76041 1014 aa12.71□□□□□ -0.37
SCN1B-208ENST00000640135 APBA3O96018 575 aa12.71□□□□□ -0.37
SCN1B-208ENST00000640135 CNNM3Q8NE01 707 aa12.71□□□□□ -0.37
SCN1B-208ENST00000640135 WDR66Q8TBY9 1149 aa12.71□□□□□ -0.37
SCN1B-208ENST00000640135 RIMBP3CA6NJZ7 1639 aa12.71□□□□□ -0.37
SCN1B-208ENST00000640135 RIMBP3BA6NNM3 1639 aa12.71□□□□□ -0.37
SCN1B-208ENST00000640135 RIMBP3Q9UFD9 1639 aa12.71□□□□□ -0.37
SCN1B-208ENST00000640135 PLXNC1O60486 1568 aa12.71□□□□□ -0.37
SCN1B-208ENST00000640135 KLF18A0A0U1RQI7 1052 aa12.71□□□□□ -0.37
SCN1B-208ENST00000640135 EPB41L2O43491 1005 aaKnown RBP12.71□□□□□ -0.37
SCN1B-208ENST00000640135 CAVIN2O95810 425 aa12.71□□□□□ -0.38
SCN1B-208ENST00000640135 CHMP4BP1P59074 171 aa12.71□□□□□ -0.38
SCN1B-208ENST00000640135 PUM3Q15397 648 aaKnown RBP12.71□□□□□ -0.38
SCN1B-208ENST00000640135 CWF19L2Q2TBE0 894 aaKnown RBP12.71□□□□□ -0.38
SCN1B-208ENST00000640135 IQSEC3Q9UPP2 1182 aaPredicted RBP12.71□□□□□ -0.38
SCN1B-208ENST00000640135 HIBADHP31937 336 aaKnown RBP12.71□□□□□ -0.38
SCN1B-208ENST00000640135 TSPOAP1O95153 1857 aa12.7□□□□□ -0.38
SCN1B-208ENST00000640135 PICALMQ13492 652 aa12.7□□□□□ -0.38
SCN1B-208ENST00000640135 CFAP100Q494V2 611 aa12.7□□□□□ -0.38
SCN1B-208ENST00000640135 JAKMIP3Q5VZ66 844 aa12.7□□□□□ -0.38
SCN1B-208ENST00000640135 GTPBP4Q9BZE4 634 aaKnown RBP12.7□□□□□ -0.38
SCN1B-208ENST00000640135 MCM9Q9NXL9 1143 aa12.7□□□□□ -0.38
SCN1B-208ENST00000640135 SAMM50Q9Y512 469 aa12.7□□□□□ -0.38
SCN1B-208ENST00000640135 KDM5DQ9BY66 1539 aa12.7□□□□□ -0.38
SCN1B-208ENST00000640135 RTL1A6NKG5 1358 aa12.7□□□□□ -0.38
SCN1B-208ENST00000640135 SDSP20132 328 aa12.7□□□□□ -0.38
SCN1B-208ENST00000640135 FAM114A1Q8IWE2 563 aa12.7□□□□□ -0.38
SCN1B-208ENST00000640135 TAF4BQ92750 862 aa12.7□□□□□ -0.38
SCN1B-208ENST00000640135 UFL1O94874 794 aa12.7□□□□□ -0.38
SCN1B-208ENST00000640135 CCDC183Q5T5S1 534 aa12.7□□□□□ -0.38
SCN1B-208ENST00000640135 ARID3AQ99856 593 aa12.7□□□□□ -0.38
SCN1B-208ENST00000640135 UBA5Q9GZZ9 404 aa12.7□□□□□ -0.38
SCN1B-208ENST00000640135 C6orf50Q9HD87 102 aa12.7□□□□□ -0.38
SCN1B-208ENST00000640135 MBD5Q9P267 1494 aa12.7□□□□□ -0.38
SCN1B-208ENST00000640135 NAP1L4Q99733 375 aaKnown RBP12.69□□□□□ -0.38
SCN1B-208ENST00000640135 STX6O43752 255 aa12.69□□□□□ -0.38
SCN1B-208ENST00000640135 CEP85Q6P2H3 762 aa12.69□□□□□ -0.38
SCN1B-208ENST00000640135 TBC1D22AQ8WUA7 517 aa12.69□□□□□ -0.38
SCN1B-208ENST00000640135 RBM8AQ9Y5S9 174 aaKnown RBP12.69□□□□□ -0.38
SCN1B-208ENST00000640135 BRF1Q92994 677 aa12.69□□□□□ -0.38
SCN1B-208ENST00000640135 ESYT1Q9BSJ8 1104 aa12.69□□□□□ -0.38
SCN1B-208ENST00000640135 CACNA2D4Q7Z3S7 1137 aa12.69□□□□□ -0.38
SCN1B-208ENST00000640135 SMARCC2Q8TAQ2 1214 aa12.69□□□□□ -0.38
SCN1B-208ENST00000640135 TBCAO75347 108 aaKnown RBP12.68□□□□□ -0.38
SCN1B-208ENST00000640135 ITGA6P23229 1130 aa12.68□□□□□ -0.38
SCN1B-208ENST00000640135 SPA17Q15506 151 aa12.68□□□□□ -0.38
SCN1B-208ENST00000640135 DPP8Q6V1X1 898 aaPredicted RBP12.68□□□□□ -0.38
SCN1B-208ENST00000640135 RMND1Q9NWS8 449 aa12.68□□□□□ -0.38
SCN1B-208ENST00000640135 MYCNP04198 464 aaPredicted RBP12.68□□□□□ -0.38
SCN1B-208ENST00000640135 GUCY1B3Q02153 619 aa12.68□□□□□ -0.38
SCN1B-208ENST00000640135 HELLSQ9NRZ9 838 aa12.68□□□□□ -0.38
SCN1B-208ENST00000640135 RIMBP2O15034 1052 aa12.68□□□□□ -0.38
SCN1B-208ENST00000640135 GJB2P29033 226 aa12.68□□□□□ -0.38
SCN1B-208ENST00000640135 GNA11P29992 359 aa12.68□□□□□ -0.38
SCN1B-208ENST00000640135 FAM89AQ96GI7 184 aa12.68□□□□□ -0.38
SCN1B-208ENST00000640135 PTPRTO14522 1441 aa12.68□□□□□ -0.38
SCN1B-208ENST00000640135 CCDC102BQ68D86 513 aa12.68□□□□□ -0.38
SCN1B-208ENST00000640135 TSPYL6Q8N831 410 aa12.68□□□□□ -0.38
SCN1B-208ENST00000640135 RRP36Q96EU6 259 aaKnown RBP12.68□□□□□ -0.38
SCN1B-208ENST00000640135 INSRP06213 1382 aa12.68□□□□□ -0.38
SCN1B-208ENST00000640135 TFCP2Q12800 502 aa12.67□□□□□ -0.38
SCN1B-208ENST00000640135 DNAJC10Q8IXB1 793 aa12.67□□□□□ -0.38
SCN1B-208ENST00000640135 BICC1Q9H694 974 aaKnown RBP12.67□□□□□ -0.38
SCN1B-208ENST00000640135 KIF2AO00139 706 aaPredicted RBP12.67□□□□□ -0.38
SCN1B-208ENST00000640135 IDEP14735 1019 aa12.67□□□□□ -0.38
SCN1B-208ENST00000640135 PA2G4Q9UQ80 394 aaKnown RBP12.67□□□□□ -0.38
SCN1B-208ENST00000640135 UGGT1Q9NYU2 1555 aa12.67□□□□□ -0.38
SCN1B-208ENST00000640135 HECW2Q9P2P5 1572 aa12.67□□□□□ -0.38
SCN1B-208ENST00000640135 SPDYE3A6NKU9 549 aa12.67□□□□□ -0.38
SCN1B-208ENST00000640135 ARHGAP29Q52LW3 1261 aa12.67□□□□□ -0.38
SCN1B-208ENST00000640135 TTC37Q6PGP7 1564 aa12.67□□□□□ -0.38
SCN1B-208ENST00000640135 KIAA1328Q86T90 577 aa12.67□□□□□ -0.38
SCN1B-208ENST00000640135 LARGE2Q8N3Y3 721 aa12.67□□□□□ -0.38
SCN1B-208ENST00000640135 MAGEB6Q8N7X4 407 aa12.67□□□□□ -0.38
SCN1B-208ENST00000640135 FSIP1Q8NA03 581 aa12.67□□□□□ -0.38
SCN1B-208ENST00000640135 CARD10Q9BWT7 1032 aa12.67□□□□□ -0.38
SCN1B-208ENST00000640135 TEX11Q8IYF3 940 aa12.67□□□□□ -0.38
SCN1B-208ENST00000640135 HELBQ8NG08 1087 aaPredicted RBP12.67□□□□□ -0.38
SCN1B-208ENST00000640135 GLT8D2Q9H1C3 349 aa12.67□□□□□ -0.38
SCN1B-208ENST00000640135 KAT6BQ8WYB5 2073 aa12.66□□□□□ -0.38
SCN1B-208ENST00000640135 MROH5Q6ZUA9 1318 aa12.66□□□□□ -0.38
SCN1B-208ENST00000640135 RBM26Q5T8P6 1007 aaKnown RBP12.66□□□□□ -0.38
SCN1B-208ENST00000640135 FAM196AQ6ZSG2 479 aa12.66□□□□□ -0.38
SCN1B-208ENST00000640135 MTERF4Q7Z6M4 381 aaKnown RBP12.66□□□□□ -0.38
SCN1B-208ENST00000640135 SPC24Q8NBT2 197 aa12.66□□□□□ -0.38
SCN1B-208ENST00000640135 LPIN2Q92539 896 aa12.66□□□□□ -0.38
SCN1B-208ENST00000640135 PREX2Q70Z35 1606 aa12.66□□□□□ -0.38
SCN1B-208ENST00000640135 KIAA0232Q92628 1395 aa12.66□□□□□ -0.38
SCN1B-208ENST00000640135 NAPAP54920 295 aa12.66□□□□□ -0.38
SCN1B-208ENST00000640135 KCNG4Q8TDN1 519 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms