RNA–Protein interactions for RNA: ENST00000640056.1

HNRNPU-224, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-224ENST00000640056 HYPKQ9NX55 129 aa11.92□□□□□ -0.5
HNRNPU-224ENST00000640056 PXDNLA1KZ92 1463 aa11.91□□□□□ -0.5
HNRNPU-224ENST00000640056 AP5Z1O43299 807 aa11.91□□□□□ -0.5
HNRNPU-224ENST00000640056 ZSCAN20P17040 1043 aaPredicted RBP11.91□□□□□ -0.5
HNRNPU-224ENST00000640056 PLCB2Q00722 1185 aa11.91□□□□□ -0.5
HNRNPU-224ENST00000640056 MTMR6Q9Y217 621 aa11.91□□□□□ -0.5
HNRNPU-224ENST00000640056 RTCBQ9Y3I0 505 aaKnown RBP11.91□□□□□ -0.5
HNRNPU-224ENST00000640056 ITGB4P16144 1822 aa11.91□□□□□ -0.5
HNRNPU-224ENST00000640056 GNPATO15228 680 aa11.91□□□□□ -0.5
HNRNPU-224ENST00000640056 CCDC192P0DO97 292 aa11.91□□□□□ -0.5
HNRNPU-224ENST00000640056 PDIA4P13667 645 aaKnown RBP11.91□□□□□ -0.5
HNRNPU-224ENST00000640056 GJB2P29033 226 aa11.91□□□□□ -0.5
HNRNPU-224ENST00000640056 DNM1Q05193 864 aaKnown RBP11.91□□□□□ -0.5
HNRNPU-224ENST00000640056 CHAF1AQ13111 956 aaPredicted RBP11.91□□□□□ -0.5
HNRNPU-224ENST00000640056 TPRNQ4KMQ1 711 aa11.91□□□□□ -0.5
HNRNPU-224ENST00000640056 VPS53Q5VIR6 699 aa11.91□□□□□ -0.5
HNRNPU-224ENST00000640056 LARP6Q9BRS8 491 aaKnown RBP11.91□□□□□ -0.5
HNRNPU-224ENST00000640056 BCL2L12Q9HB09 334 aa11.91□□□□□ -0.5
HNRNPU-224ENST00000640056 SH2B1Q9NRF2 756 aaPredicted RBP11.91□□□□□ -0.5
HNRNPU-224ENST00000640056 GNAT3A8MTJ3 354 aa11.9□□□□□ -0.5
HNRNPU-224ENST00000640056 CASTP20810 708 aaKnown RBP11.9□□□□□ -0.5
HNRNPU-224ENST00000640056 PPP4R3BQ5MIZ7 849 aa11.9□□□□□ -0.5
HNRNPU-224ENST00000640056 CWC27Q6UX04 472 aaKnown RBP11.9□□□□□ -0.5
HNRNPU-224ENST00000640056 NFATC2IPQ8NCF5 419 aa11.9□□□□□ -0.5
HNRNPU-224ENST00000640056 NECTIN2Q92692 538 aa11.9□□□□□ -0.5
HNRNPU-224ENST00000640056 TM6SF1Q9BZW5 370 aa11.9□□□□□ -0.5
HNRNPU-224ENST00000640056 KCNF1Q9H3M0 494 aa11.9□□□□□ -0.5
HNRNPU-224ENST00000640056 SLC52A2Q9HAB3 445 aa11.9□□□□□ -0.5
HNRNPU-224ENST00000640056 PRDM10Q9NQV6 1147 aa11.9□□□□□ -0.5
HNRNPU-224ENST00000640056 KAT6BQ8WYB5 2073 aa11.9□□□□□ -0.5
HNRNPU-224ENST00000640056 GRIN3BO60391 1043 aa11.89□□□□□ -0.51
HNRNPU-224ENST00000640056 TRAPPC3LQ5T215 181 aa11.89□□□□□ -0.51
HNRNPU-224ENST00000640056 RUFY2Q8WXA3 655 aa11.89□□□□□ -0.51
HNRNPU-224ENST00000640056 PDRG1Q9NUG6 133 aa11.89□□□□□ -0.51
HNRNPU-224ENST00000640056 PYCARDQ9ULZ3 195 aa11.89□□□□□ -0.51
HNRNPU-224ENST00000640056 SRGAP3O43295 1099 aa11.89□□□□□ -0.51
HNRNPU-224ENST00000640056 RPS6KA4O75676 772 aa11.89□□□□□ -0.51
HNRNPU-224ENST00000640056 TAF7Q15545 349 aaPredicted RBP11.89□□□□□ -0.51
HNRNPU-224ENST00000640056 HSP90AB4PQ58FF6 505 aa11.89□□□□□ -0.51
HNRNPU-224ENST00000640056 CCDC83Q8IWF9 413 aa11.89□□□□□ -0.51
HNRNPU-224ENST00000640056 NLGN1Q8N2Q7 840 aa11.89□□□□□ -0.51
HNRNPU-224ENST00000640056 KCNB2Q92953 911 aa11.89□□□□□ -0.51
HNRNPU-224ENST00000640056 GTPBP4Q9BZE4 634 aaKnown RBP11.89□□□□□ -0.51
HNRNPU-224ENST00000640056 ZSWIM6Q9HCJ5 1215 aa11.89□□□□□ -0.51
HNRNPU-224ENST00000640056 TTC41PQ6P2S7 1318 aa11.89□□□□□ -0.51
HNRNPU-224ENST00000640056 USP42Q9H9J4 1324 aaKnown RBP11.89□□□□□ -0.51
HNRNPU-224ENST00000640056 MRC1P22897 1456 aa11.89□□□□□ -0.51
HNRNPU-224ENST00000640056 RIOK3O14730 519 aaKnown RBP11.88□□□□□ -0.51
HNRNPU-224ENST00000640056 RNMTO43148 476 aaKnown RBP11.88□□□□□ -0.51
HNRNPU-224ENST00000640056 CTIFO43310 598 aaKnown RBP11.88□□□□□ -0.51
HNRNPU-224ENST00000640056 GLRX3O76003 335 aaKnown RBP11.88□□□□□ -0.51
HNRNPU-224ENST00000640056 LARGE1O95461 756 aa11.88□□□□□ -0.51
HNRNPU-224ENST00000640056 CBX1P83916 185 aa11.88□□□□□ -0.51
HNRNPU-224ENST00000640056 MSL1Q68DK7 614 aa11.88□□□□□ -0.51
HNRNPU-224ENST00000640056 TAF1LQ8IZX4 1826 aa11.88□□□□□ -0.51
HNRNPU-224ENST00000640056 PDCL2Q8N4E4 241 aa11.88□□□□□ -0.51
HNRNPU-224ENST00000640056 FAM200AQ8TCP9 573 aa11.88□□□□□ -0.51
HNRNPU-224ENST00000640056 SLC4A9Q96Q91 983 aa11.88□□□□□ -0.51
HNRNPU-224ENST00000640056 CYP46A1Q9Y6A2 500 aa11.88□□□□□ -0.51
HNRNPU-224ENST00000640056 CPA1P15085 419 aa11.87□□□□□ -0.51
HNRNPU-224ENST00000640056 ATP2B3Q16720 1220 aa11.87□□□□□ -0.51
HNRNPU-224ENST00000640056 IL17REQ8NFR9 667 aa11.87□□□□□ -0.51
HNRNPU-224ENST00000640056 ANKRD7Q92527 254 aa11.87□□□□□ -0.51
HNRNPU-224ENST00000640056 CACNA1FO60840 1977 aa11.87□□□□□ -0.51
HNRNPU-224ENST00000640056 FAM177BA6PVY3 158 aa11.87□□□□□ -0.51
HNRNPU-224ENST00000640056 KIF3CO14782 793 aa11.87□□□□□ -0.51
HNRNPU-224ENST00000640056 AMIGO3Q86WK7 504 aa11.87□□□□□ -0.51
HNRNPU-224ENST00000640056 SPC24Q8NBT2 197 aa11.87□□□□□ -0.51
HNRNPU-224ENST00000640056 JAKMIP1Q96N16 626 aaKnown RBP11.87□□□□□ -0.51
HNRNPU-224ENST00000640056 PHAXQ9H814 394 aaKnown RBP11.87□□□□□ -0.51
HNRNPU-224ENST00000640056 CICQ96RK0 1608 aaPredicted RBP11.87□□□□□ -0.51
HNRNPU-224ENST00000640056 ELP1O95163 1332 aa11.86□□□□□ -0.51
HNRNPU-224ENST00000640056 HSPA1AP0DMV8 641 aaKnown RBP11.86□□□□□ -0.51
HNRNPU-224ENST00000640056 HSPA1BP0DMV9 641 aaKnown RBP11.86□□□□□ -0.51
HNRNPU-224ENST00000640056 MAP3K11Q16584 847 aa11.86□□□□□ -0.51
HNRNPU-224ENST00000640056 ADCK5Q3MIX3 580 aa11.86□□□□□ -0.51
HNRNPU-224ENST00000640056 HDGFL1Q5TGJ6 251 aa11.86□□□□□ -0.51
HNRNPU-224ENST00000640056 VPS37CA5D8V6 355 aaPredicted RBP11.86□□□□□ -0.51
HNRNPU-224ENST00000640056 PTCD1O75127 700 aaKnown RBP11.86□□□□□ -0.51
HNRNPU-224ENST00000640056 RGS19P49795 217 aa11.86□□□□□ -0.51
HNRNPU-224ENST00000640056 KRT85P78386 507 aa11.86□□□□□ -0.51
HNRNPU-224ENST00000640056 PTH1RQ03431 593 aa11.86□□□□□ -0.51
HNRNPU-224ENST00000640056 NECTIN1Q15223 517 aa11.86□□□□□ -0.51
HNRNPU-224ENST00000640056 ME3Q16798 604 aa11.86□□□□□ -0.51
HNRNPU-224ENST00000640056 PRPF40BQ6NWY9 871 aaKnown RBP11.86□□□□□ -0.51
HNRNPU-224ENST00000640056 NLGN2Q8NFZ4 835 aa11.86□□□□□ -0.51
HNRNPU-224ENST00000640056 N4BP2Q86UW6 1770 aaPredicted RBP11.85□□□□□ -0.51
HNRNPU-224ENST00000640056 NBPF7P0C2Y1 421 aaPredicted RBP11.85□□□□□ -0.51
HNRNPU-224ENST00000640056 ZKSCAN1P17029 563 aaPredicted RBP11.85□□□□□ -0.51
HNRNPU-224ENST00000640056 RFC4P35249 363 aa11.85□□□□□ -0.51
HNRNPU-224ENST00000640056 TYRO3Q06418 890 aa11.85□□□□□ -0.51
HNRNPU-224ENST00000640056 ST3GAL1Q11201 340 aa11.85□□□□□ -0.51
HNRNPU-224ENST00000640056 LARP1BQ659C4 914 aaKnown RBP11.85□□□□□ -0.51
HNRNPU-224ENST00000640056 TTC6Q86TZ1 520 aa11.85□□□□□ -0.51
HNRNPU-224ENST00000640056 NUP62CLQ9H1M0 184 aa11.85□□□□□ -0.51
HNRNPU-224ENST00000640056 LGR6Q9HBX8 967 aa11.85□□□□□ -0.51
HNRNPU-224ENST00000640056 MRVI1Q9Y6F6 885 aa11.85□□□□□ -0.51
HNRNPU-224ENST00000640056 UBR3Q6ZT12 1888 aa11.85□□□□□ -0.51
HNRNPU-224ENST00000640056 CCDC171Q6TFL3 1326 aa11.84□□□□□ -0.51
HNRNPU-224ENST00000640056 PDCP20941 246 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 296.2 ms