RNA–Protein interactions for RNA: ENST00000640043.1

MCF2L2-214, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 5

Gene MCF2L2, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-214ENST00000640043 TAF7Q15545 349 aaPredicted RBP12.16□□□□□ -0.46
MCF2L2-214ENST00000640043 HLFQ16534 295 aa12.16□□□□□ -0.46
MCF2L2-214ENST00000640043 CDC37L1Q7L3B6 337 aa12.16□□□□□ -0.46
MCF2L2-214ENST00000640043 PNISRQ8TF01 805 aaKnown RBP12.16□□□□□ -0.46
MCF2L2-214ENST00000640043 RTFDC1Q9BY42 306 aaPredicted RBP12.16□□□□□ -0.46
MCF2L2-214ENST00000640043 SAGE1Q9NXZ1 904 aa12.16□□□□□ -0.46
MCF2L2-214ENST00000640043 ZNRF3Q9ULT6 936 aa12.16□□□□□ -0.46
MCF2L2-214ENST00000640043 ERBB4Q15303 1308 aa12.15□□□□□ -0.46
MCF2L2-214ENST00000640043 PPIP5K2O43314 1243 aa12.15□□□□□ -0.46
MCF2L2-214ENST00000640043 GRM1Q13255 1194 aa12.15□□□□□ -0.46
MCF2L2-214ENST00000640043 TNIP1Q15025 636 aa12.15□□□□□ -0.46
MCF2L2-214ENST00000640043 PARP10Q53GL7 1025 aa12.15□□□□□ -0.46
MCF2L2-214ENST00000640043 KIF6Q6ZMV9 814 aa12.15□□□□□ -0.46
MCF2L2-214ENST00000640043 SND1Q7KZF4 910 aaKnown RBP eCLIP12.15□□□□□ -0.46
MCF2L2-214ENST00000640043 USTQ9Y2C2 406 aa12.15□□□□□ -0.46
MCF2L2-214ENST00000640043 COG6Q9Y2V7 657 aa12.15□□□□□ -0.46
MCF2L2-214ENST00000640043 ATP6V0A2Q9Y487 856 aa12.15□□□□□ -0.46
MCF2L2-214ENST00000640043 AKAP11Q9UKA4 1901 aa12.14□□□□□ -0.47
MCF2L2-214ENST00000640043 FAM177BA6PVY3 158 aa12.14□□□□□ -0.47
MCF2L2-214ENST00000640043 GPR37O15354 613 aa12.14□□□□□ -0.47
MCF2L2-214ENST00000640043 AOC2O75106 756 aa12.14□□□□□ -0.47
MCF2L2-214ENST00000640043 DGKZQ13574 1117 aa12.14□□□□□ -0.47
MCF2L2-214ENST00000640043 SH3D19Q5HYK7 790 aa12.14□□□□□ -0.47
MCF2L2-214ENST00000640043 PPP1R42Q7Z4L9 355 aa12.14□□□□□ -0.47
MCF2L2-214ENST00000640043 UNCXA6NJT0 531 aa12.13□□□□□ -0.47
MCF2L2-214ENST00000640043 BBOX1O75936 387 aa12.13□□□□□ -0.47
MCF2L2-214ENST00000640043 FMR1Q06787 632 aaKnown RBP eCLIP12.13□□□□□ -0.47
MCF2L2-214ENST00000640043 CXCL9Q07325 125 aa12.13□□□□□ -0.47
MCF2L2-214ENST00000640043 SLC10A5Q5PT55 438 aa12.13□□□□□ -0.47
MCF2L2-214ENST00000640043 CIAPIN1Q6FI81 312 aa12.13□□□□□ -0.47
MCF2L2-214ENST00000640043 MCM10Q7L590 875 aa12.13□□□□□ -0.47
MCF2L2-214ENST00000640043 TMC4Q7Z404 712 aa12.13□□□□□ -0.47
MCF2L2-214ENST00000640043 NUTM1Q86Y26 1132 aa12.13□□□□□ -0.47
MCF2L2-214ENST00000640043 REM2Q8IYK8 340 aaPredicted RBP12.13□□□□□ -0.47
MCF2L2-214ENST00000640043 ZNF34Q8IZ26 560 aa12.13□□□□□ -0.47
MCF2L2-214ENST00000640043 DDX27Q96GQ7 796 aaKnown RBP12.13□□□□□ -0.47
MCF2L2-214ENST00000640043 NLRP3Q96P20 1036 aa12.13□□□□□ -0.47
MCF2L2-214ENST00000640043 ANKRD36CQ5JPF3 1778 aa12.13□□□□□ -0.47
MCF2L2-214ENST00000640043 KDM3BQ7LBC6 1761 aa12.13□□□□□ -0.47
MCF2L2-214ENST00000640043 NTSR2O95665 410 aa12.12□□□□□ -0.47
MCF2L2-214ENST00000640043 GMPSP49915 693 aaPredicted RBP12.12□□□□□ -0.47
MCF2L2-214ENST00000640043 KIAA2012Q0VF49 1180 aa12.12□□□□□ -0.47
MCF2L2-214ENST00000640043 GIGYF2Q6Y7W6 1299 aaKnown RBP12.12□□□□□ -0.47
MCF2L2-214ENST00000640043 UBE2Q2Q8WVN8 375 aa12.12□□□□□ -0.47
MCF2L2-214ENST00000640043 TSKSQ9UJT2 592 aa12.12□□□□□ -0.47
MCF2L2-214ENST00000640043 UBN2Q6ZU65 1347 aa12.11□□□□□ -0.47
MCF2L2-214ENST00000640043 POLR2AP24928 1970 aaKnown RBP12.11□□□□□ -0.47
MCF2L2-214ENST00000640043 SPDYE5A6NIY4 337 aa12.11□□□□□ -0.47
MCF2L2-214ENST00000640043 H7C1D1 291 aa12.11□□□□□ -0.47
MCF2L2-214ENST00000640043 AOC3Q16853 763 aa12.11□□□□□ -0.47
MCF2L2-214ENST00000640043 ZNF467Q7Z7K2 595 aaPredicted RBP12.11□□□□□ -0.47
MCF2L2-214ENST00000640043 SP8Q8IXZ3 490 aa12.11□□□□□ -0.47
MCF2L2-214ENST00000640043 DPF2Q92785 391 aa12.11□□□□□ -0.47
MCF2L2-214ENST00000640043 BCL2L13Q9BXK5 485 aa12.11□□□□□ -0.47
MCF2L2-214ENST00000640043 GLIS2Q9BZE0 524 aaPredicted RBP12.11□□□□□ -0.47
MCF2L2-214ENST00000640043 RBM47A0AV96 593 aaKnown RBP12.1□□□□□ -0.47
MCF2L2-214ENST00000640043 NEFMP07197 916 aa12.1□□□□□ -0.47
MCF2L2-214ENST00000640043 U2AF1L5P0DN76 240 aaPredicted RBP12.1□□□□□ -0.47
MCF2L2-214ENST00000640043 HUNKP57058 714 aa12.1□□□□□ -0.47
MCF2L2-214ENST00000640043 U2AF1Q01081 240 aaKnown RBP eCLIP12.1□□□□□ -0.47
MCF2L2-214ENST00000640043 PDAP1Q13442 181 aaKnown RBP12.1□□□□□ -0.47
MCF2L2-214ENST00000640043 TTLL12Q14166 644 aaPredicted RBP12.1□□□□□ -0.47
MCF2L2-214ENST00000640043 SUSD4Q5VX71 490 aa12.1□□□□□ -0.47
MCF2L2-214ENST00000640043 DPP8Q6V1X1 898 aaPredicted RBP12.1□□□□□ -0.47
MCF2L2-214ENST00000640043 RASEFQ8IZ41 740 aa12.1□□□□□ -0.47
MCF2L2-214ENST00000640043 PRPF38BQ5VTL8 546 aaKnown RBP12.09□□□□□ -0.47
MCF2L2-214ENST00000640043 MPNDQ8N594 471 aa12.09□□□□□ -0.47
MCF2L2-214ENST00000640043 UTP14AQ9BVJ6 771 aaKnown RBP12.09□□□□□ -0.47
MCF2L2-214ENST00000640043 CNOT7Q9UIV1 285 aaKnown RBP12.09□□□□□ -0.47
MCF2L2-214ENST00000640043 DLG5Q8TDM6 1919 aa12.09□□□□□ -0.47
MCF2L2-214ENST00000640043 ABCB7O75027 752 aa12.08□□□□□ -0.48
MCF2L2-214ENST00000640043 GPTP24298 496 aa12.08□□□□□ -0.48
MCF2L2-214ENST00000640043 RPS12P25398 132 aaKnown RBP12.08□□□□□ -0.48
MCF2L2-214ENST00000640043 HIRAP54198 1017 aaPredicted RBP12.08□□□□□ -0.48
MCF2L2-214ENST00000640043 EIF4A1P60842 406 aaKnown RBP12.08□□□□□ -0.48
MCF2L2-214ENST00000640043 HSP90AB3PQ58FF7 597 aa12.08□□□□□ -0.48
MCF2L2-214ENST00000640043 RGMBQ6NW40 437 aa12.08□□□□□ -0.48
MCF2L2-214ENST00000640043 TTLL7Q6ZT98 887 aa12.08□□□□□ -0.48
MCF2L2-214ENST00000640043 ABCC4O15439 1325 aa12.08□□□□□ -0.48
MCF2L2-214ENST00000640043 LAMB2P55268 1798 aa12.07□□□□□ -0.48
MCF2L2-214ENST00000640043 LRRC37AA6NMS7 1700 aa12.07□□□□□ -0.48
MCF2L2-214ENST00000640043 FAM155AB1AL88 458 aaPredicted RBP12.07□□□□□ -0.48
MCF2L2-214ENST00000640043 PKN2Q16513 984 aaKnown RBP12.07□□□□□ -0.48
MCF2L2-214ENST00000640043 C2orf69Q8N8R5 385 aa12.07□□□□□ -0.48
MCF2L2-214ENST00000640043 CALR3Q96L12 384 aaKnown RBP12.07□□□□□ -0.48
MCF2L2-214ENST00000640043 PCGF6Q9BYE7 350 aa12.07□□□□□ -0.48
MCF2L2-214ENST00000640043 ZBTB3Q9H5J0 574 aa12.07□□□□□ -0.48
MCF2L2-214ENST00000640043 ZNF408Q9H9D4 720 aa12.07□□□□□ -0.48
MCF2L2-214ENST00000640043 RRP7AQ9Y3A4 280 aaKnown RBP12.07□□□□□ -0.48
MCF2L2-214ENST00000640043 IVNS1ABPQ9Y6Y0 642 aa12.07□□□□□ -0.48
MCF2L2-214ENST00000640043 DDX60Q8IY21 1712 aaKnown RBP12.06□□□□□ -0.48
MCF2L2-214ENST00000640043 DCTN1Q14203 1278 aa12.06□□□□□ -0.48
MCF2L2-214ENST00000640043 DDX46Q7L014 1031 aaKnown RBP12.06□□□□□ -0.48
MCF2L2-214ENST00000640043 KRT26Q7Z3Y9 468 aa12.06□□□□□ -0.48
MCF2L2-214ENST00000640043 MICALL2Q8IY33 904 aa12.06□□□□□ -0.48
MCF2L2-214ENST00000640043 NGEFQ8N5V2 710 aa12.06□□□□□ -0.48
MCF2L2-214ENST00000640043 GBA2Q9HCG7 927 aaPredicted RBP12.06□□□□□ -0.48
MCF2L2-214ENST00000640043 CWC22Q9HCG8 908 aaKnown RBP12.06□□□□□ -0.48
MCF2L2-214ENST00000640043 TCERG1O14776 1098 aaKnown RBP12.05□□□□□ -0.48
MCF2L2-214ENST00000640043 RAD17O75943 681 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms