RNA–Protein interactions for RNA: ENST00000640011.1

PRKCH-228, Transcript of protein kinase C eta, humanhuman

TSL 5 BASIC

Gene PRKCH, Length 285 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-228ENST00000640011 PPP1R42Q7Z4L9 355 aa8.28□□□□□ -1.08
PRKCH-228ENST00000640011 SLC24A3Q9HC58 644 aa8.28□□□□□ -1.08
PRKCH-228ENST00000640011 TSKSQ9UJT2 592 aa8.28□□□□□ -1.08
PRKCH-228ENST00000640011 ZNRF3Q9ULT6 936 aa8.28□□□□□ -1.08
PRKCH-228ENST00000640011 PER1O15534 1290 aaPredicted RBP8.27□□□□□ -1.09
PRKCH-228ENST00000640011 KCNQ3O43525 872 aa8.27□□□□□ -1.09
PRKCH-228ENST00000640011 PRKAR2BP31323 418 aa8.27□□□□□ -1.09
PRKCH-228ENST00000640011 PIP4K2AP48426 406 aaPredicted RBP8.27□□□□□ -1.09
PRKCH-228ENST00000640011 HLFQ16534 295 aa8.27□□□□□ -1.09
PRKCH-228ENST00000640011 CC2D1BQ5T0F9 858 aaKnown RBP8.27□□□□□ -1.09
PRKCH-228ENST00000640011 PNISRQ8TF01 805 aaKnown RBP8.27□□□□□ -1.09
PRKCH-228ENST00000640011 DDX12PQ92771 950 aa8.27□□□□□ -1.09
PRKCH-228ENST00000640011 CCDC102AQ96A19 550 aa8.27□□□□□ -1.09
PRKCH-228ENST00000640011 NLRP3Q96P20 1036 aa8.27□□□□□ -1.09
PRKCH-228ENST00000640011 BCL2L13Q9BXK5 485 aa8.27□□□□□ -1.09
PRKCH-228ENST00000640011 MAP3K15Q6ZN16 1313 aa8.27□□□□□ -1.09
PRKCH-228ENST00000640011 PRAMEF22A3QJZ6 481 aa8.26□□□□□ -1.09
PRKCH-228ENST00000640011 NBPF26B4DH59 902 aa8.26□□□□□ -1.09
PRKCH-228ENST00000640011 H7C1D1 291 aa8.26□□□□□ -1.09
PRKCH-228ENST00000640011 GPR37O15354 613 aa8.26□□□□□ -1.09
PRKCH-228ENST00000640011 TBC1D12O60347 775 aa8.26□□□□□ -1.09
PRKCH-228ENST00000640011 NEFMP07197 916 aa8.26□□□□□ -1.09
PRKCH-228ENST00000640011 TAF7Q15545 349 aaPredicted RBP8.26□□□□□ -1.09
PRKCH-228ENST00000640011 PARP10Q53GL7 1025 aa8.26□□□□□ -1.09
PRKCH-228ENST00000640011 PRPF38BQ5VTL8 546 aaKnown RBP8.26□□□□□ -1.09
PRKCH-228ENST00000640011 CIAPIN1Q6FI81 312 aa8.26□□□□□ -1.09
PRKCH-228ENST00000640011 NBPF10Q6P3W6 841 aaKnown RBP8.26□□□□□ -1.09
PRKCH-228ENST00000640011 NUTM1Q86Y26 1132 aa8.26□□□□□ -1.09
PRKCH-228ENST00000640011 GPIHBP1Q8IV16 184 aa8.26□□□□□ -1.09
PRKCH-228ENST00000640011 NBPF15Q8N660 670 aa8.26□□□□□ -1.09
PRKCH-228ENST00000640011 RTFDC1Q9BY42 306 aaPredicted RBP8.26□□□□□ -1.09
PRKCH-228ENST00000640011 RSPH6AQ9H0K4 717 aa8.26□□□□□ -1.09
PRKCH-228ENST00000640011 ZNF408Q9H9D4 720 aa8.26□□□□□ -1.09
PRKCH-228ENST00000640011 ATP6V0A2Q9Y487 856 aa8.26□□□□□ -1.09
PRKCH-228ENST00000640011 CACNA1SQ13698 1873 aa8.26□□□□□ -1.09
PRKCH-228ENST00000640011 SIPA1L3O60292 1781 aaPredicted RBP8.25□□□□□ -1.09
PRKCH-228ENST00000640011 ABCC12Q96J65 1359 aa8.25□□□□□ -1.09
PRKCH-228ENST00000640011 BBOX1O75936 387 aa8.25□□□□□ -1.09
PRKCH-228ENST00000640011 HUNKP57058 714 aa8.25□□□□□ -1.09
PRKCH-228ENST00000640011 FMR1Q06787 632 aaKnown RBP eCLIP8.25□□□□□ -1.09
PRKCH-228ENST00000640011 CXCL9Q07325 125 aa8.25□□□□□ -1.09
PRKCH-228ENST00000640011 AOC3Q16853 763 aa8.25□□□□□ -1.09
PRKCH-228ENST00000640011 DPP8Q6V1X1 898 aaPredicted RBP8.25□□□□□ -1.09
PRKCH-228ENST00000640011 TMC4Q7Z404 712 aa8.25□□□□□ -1.09
PRKCH-228ENST00000640011 PCDHGA4Q9Y5G9 962 aa8.25□□□□□ -1.09
PRKCH-228ENST00000640011 ERBB4Q15303 1308 aa8.25□□□□□ -1.09
PRKCH-228ENST00000640011 COL3A1P02461 1466 aaPredicted RBP8.25□□□□□ -1.09
PRKCH-228ENST00000640011 LTBP1Q14766 1721 aa8.24□□□□□ -1.09
PRKCH-228ENST00000640011 GMPSP49915 693 aaPredicted RBP8.24□□□□□ -1.09
PRKCH-228ENST00000640011 KIAA2012Q0VF49 1180 aa8.24□□□□□ -1.09
PRKCH-228ENST00000640011 PKN2Q16513 984 aaKnown RBP8.24□□□□□ -1.09
PRKCH-228ENST00000640011 RGMBQ6NW40 437 aa8.24□□□□□ -1.09
PRKCH-228ENST00000640011 GIGYF2Q6Y7W6 1299 aaKnown RBP8.24□□□□□ -1.09
PRKCH-228ENST00000640011 MCM10Q7L590 875 aa8.24□□□□□ -1.09
PRKCH-228ENST00000640011 C2orf69Q8N8R5 385 aa8.24□□□□□ -1.09
PRKCH-228ENST00000640011 DPF2Q92785 391 aa8.24□□□□□ -1.09
PRKCH-228ENST00000640011 GCC1Q96CN9 775 aa8.24□□□□□ -1.09
PRKCH-228ENST00000640011 PHACTR3Q96KR7 559 aa8.24□□□□□ -1.09
PRKCH-228ENST00000640011 GLIS2Q9BZE0 524 aaPredicted RBP8.24□□□□□ -1.09
PRKCH-228ENST00000640011 NTSR2O95665 410 aa8.23□□□□□ -1.09
PRKCH-228ENST00000640011 U2AF1L5P0DN76 240 aaPredicted RBP8.23□□□□□ -1.09
PRKCH-228ENST00000640011 HOXB3P14651 431 aaPredicted RBP8.23□□□□□ -1.09
PRKCH-228ENST00000640011 RPS12P25398 132 aaKnown RBP8.23□□□□□ -1.09
PRKCH-228ENST00000640011 U2AF1Q01081 240 aaKnown RBP eCLIP8.23□□□□□ -1.09
PRKCH-228ENST00000640011 SLC10A5Q5PT55 438 aa8.23□□□□□ -1.09
PRKCH-228ENST00000640011 SUSD4Q5VX71 490 aa8.23□□□□□ -1.09
PRKCH-228ENST00000640011 SP8Q8IXZ3 490 aa8.23□□□□□ -1.09
PRKCH-228ENST00000640011 ZNF34Q8IZ26 560 aa8.23□□□□□ -1.09
PRKCH-228ENST00000640011 MPNDQ8N594 471 aa8.23□□□□□ -1.09
PRKCH-228ENST00000640011 UTP14AQ9BVJ6 771 aaKnown RBP8.23□□□□□ -1.09
PRKCH-228ENST00000640011 CNOT7Q9UIV1 285 aaKnown RBP8.23□□□□□ -1.09
PRKCH-228ENST00000640011 COL4A5P29400 1685 aa8.23□□□□□ -1.09
PRKCH-228ENST00000640011 TRPM7Q96QT4 1865 aa8.23□□□□□ -1.09
PRKCH-228ENST00000640011 UBN2Q6ZU65 1347 aa8.23□□□□□ -1.09
PRKCH-228ENST00000640011 TCERG1O14776 1098 aaKnown RBP8.22□□□□□ -1.09
PRKCH-228ENST00000640011 GPTP24298 496 aa8.22□□□□□ -1.09
PRKCH-228ENST00000640011 HSP90AB3PQ58FF7 597 aa8.22□□□□□ -1.09
PRKCH-228ENST00000640011 DDX46Q7L014 1031 aaKnown RBP8.22□□□□□ -1.09
PRKCH-228ENST00000640011 KRT26Q7Z3Y9 468 aa8.22□□□□□ -1.09
PRKCH-228ENST00000640011 CTU1Q7Z7A3 348 aaKnown RBP8.22□□□□□ -1.09
PRKCH-228ENST00000640011 NGEFQ8N5V2 710 aa8.22□□□□□ -1.09
PRKCH-228ENST00000640011 SLAIN1Q8ND83 568 aa8.22□□□□□ -1.09
PRKCH-228ENST00000640011 DCPSQ96C86 337 aaKnown RBP8.22□□□□□ -1.09
PRKCH-228ENST00000640011 GBA2Q9HCG7 927 aaPredicted RBP8.22□□□□□ -1.09
PRKCH-228ENST00000640011 RRP7AQ9Y3A4 280 aaKnown RBP8.22□□□□□ -1.09
PRKCH-228ENST00000640011 TNRC18O15417 2968 aaPredicted RBP8.21□□□□□ -1.09
PRKCH-228ENST00000640011 RAD17O75943 681 aa8.21□□□□□ -1.1
PRKCH-228ENST00000640011 ZNF157P51786 506 aaPredicted RBP8.21□□□□□ -1.1
PRKCH-228ENST00000640011 HIRAP54198 1017 aaPredicted RBP8.21□□□□□ -1.1
PRKCH-228ENST00000640011 USP48Q86UV5 1035 aa8.21□□□□□ -1.1
PRKCH-228ENST00000640011 PNNQ9H307 717 aaKnown RBP8.21□□□□□ -1.1
PRKCH-228ENST00000640011 ZBTB3Q9H5J0 574 aa8.21□□□□□ -1.1
PRKCH-228ENST00000640011 ABCC4O15439 1325 aa8.21□□□□□ -1.1
PRKCH-228ENST00000640011 FAM155AB1AL88 458 aaPredicted RBP8.2□□□□□ -1.1
PRKCH-228ENST00000640011 TRPA1O75762 1119 aa8.2□□□□□ -1.1
PRKCH-228ENST00000640011 SLC10A3P09131 477 aa8.2□□□□□ -1.1
PRKCH-228ENST00000640011 MYL6BP14649 208 aa8.2□□□□□ -1.1
PRKCH-228ENST00000640011 SOX10P56693 466 aa8.2□□□□□ -1.1
PRKCH-228ENST00000640011 EIF4A1P60842 406 aaKnown RBP8.2□□□□□ -1.1
PRKCH-228ENST00000640011 FKBP1BP68106 108 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms