RNA–Protein interactions for RNA: ENST00000639880.1

HNRNPU-222, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,239 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-222ENST00000639880 ZNF594Q96JF6 807 aaPredicted RBP9.74□□□□□ -0.85
HNRNPU-222ENST00000639880 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.74□□□□□ -0.85
HNRNPU-222ENST00000639880 V9GYY5 206 aaPredicted RBP9.74□□□□□ -0.85
HNRNPU-222ENST00000639880 PRC1O43663 620 aa9.74□□□□□ -0.85
HNRNPU-222ENST00000639880 CAVIN2O95810 425 aa9.74□□□□□ -0.85
HNRNPU-222ENST00000639880 PROSER3Q2NL68 480 aa9.74□□□□□ -0.85
HNRNPU-222ENST00000639880 HELBQ8NG08 1087 aaPredicted RBP9.74□□□□□ -0.85
HNRNPU-222ENST00000639880 CAGE1Q8TC20 777 aa9.74□□□□□ -0.85
HNRNPU-222ENST00000639880 PPP1R9BQ96SB3 815 aa9.74□□□□□ -0.85
HNRNPU-222ENST00000639880 LMOD1P29536 600 aaPredicted RBP9.74□□□□□ -0.85
HNRNPU-222ENST00000639880 GCKRQ14397 625 aa9.74□□□□□ -0.85
HNRNPU-222ENST00000639880 CEP135Q66GS9 1140 aa9.74□□□□□ -0.85
HNRNPU-222ENST00000639880 UBE2Q2Q8WVN8 375 aa9.74□□□□□ -0.85
HNRNPU-222ENST00000639880 ALG1Q9BT22 464 aa9.74□□□□□ -0.85
HNRNPU-222ENST00000639880 METTL22Q9BUU2 404 aaPredicted RBP9.74□□□□□ -0.85
HNRNPU-222ENST00000639880 NSFL1CQ9UNZ2 370 aaKnown RBP9.74□□□□□ -0.85
HNRNPU-222ENST00000639880 PTCH1Q13635 1447 aa9.74□□□□□ -0.85
HNRNPU-222ENST00000639880 A0A0D9SFI3 127 aa9.74□□□□□ -0.85
HNRNPU-222ENST00000639880 SYKP43405 635 aa9.74□□□□□ -0.85
HNRNPU-222ENST00000639880 SSRP1Q08945 709 aaKnown RBP9.74□□□□□ -0.85
HNRNPU-222ENST00000639880 DHX8Q14562 1220 aaKnown RBP9.74□□□□□ -0.85
HNRNPU-222ENST00000639880 SKIDA1Q1XH10 827 aa9.74□□□□□ -0.85
HNRNPU-222ENST00000639880 DCAF5Q96JK2 942 aa9.74□□□□□ -0.85
HNRNPU-222ENST00000639880 A0A1B0GVL5 298 aa9.73□□□□□ -0.85
HNRNPU-222ENST00000639880 OTUD7BQ6GQQ9 843 aa9.73□□□□□ -0.85
HNRNPU-222ENST00000639880 DDX17Q92841 729 aaKnown RBP9.73□□□□□ -0.85
HNRNPU-222ENST00000639880 STAP2Q9UGK3 403 aa9.73□□□□□ -0.85
HNRNPU-222ENST00000639880 GLI2P10070 1586 aa9.73□□□□□ -0.85
HNRNPU-222ENST00000639880 ERICH4A6NGS2 130 aa9.73□□□□□ -0.85
HNRNPU-222ENST00000639880 CADPS2Q86UW7 1296 aa9.73□□□□□ -0.85
HNRNPU-222ENST00000639880 FAM89AQ96GI7 184 aa9.73□□□□□ -0.85
HNRNPU-222ENST00000639880 SEC62Q99442 399 aaKnown RBP9.73□□□□□ -0.85
HNRNPU-222ENST00000639880 MAGEC2Q9UBF1 373 aaPredicted RBP9.73□□□□□ -0.85
HNRNPU-222ENST00000639880 CCDC196A0A1B0GTZ2 297 aa9.73□□□□□ -0.85
HNRNPU-222ENST00000639880 PRAMEF22A3QJZ6 481 aa9.73□□□□□ -0.85
HNRNPU-222ENST00000639880 RNF113AO15541 343 aaKnown RBP9.73□□□□□ -0.85
HNRNPU-222ENST00000639880 NEMFO60524 1076 aa9.73□□□□□ -0.85
HNRNPU-222ENST00000639880 A1BGP04217 495 aa9.73□□□□□ -0.85
HNRNPU-222ENST00000639880 SLC5A1P13866 664 aa9.73□□□□□ -0.85
HNRNPU-222ENST00000639880 KIF2CQ99661 725 aa9.73□□□□□ -0.85
HNRNPU-222ENST00000639880 IGSF1Q8N6C5 1336 aa9.73□□□□□ -0.85
HNRNPU-222ENST00000639880 A0A1B0GUL7 405 aa9.72□□□□□ -0.85
HNRNPU-222ENST00000639880 ZBTB43O43298 467 aa9.72□□□□□ -0.85
HNRNPU-222ENST00000639880 GSDMDP57764 484 aa9.72□□□□□ -0.85
HNRNPU-222ENST00000639880 ATP2B2Q01814 1243 aa9.72□□□□□ -0.85
HNRNPU-222ENST00000639880 SNW1Q13573 536 aaKnown RBP9.72□□□□□ -0.85
HNRNPU-222ENST00000639880 CCDC102BQ68D86 513 aa9.72□□□□□ -0.85
HNRNPU-222ENST00000639880 TSC1Q92574 1164 aa9.72□□□□□ -0.85
HNRNPU-222ENST00000639880 TRIM34Q9BYJ4 488 aa9.72□□□□□ -0.85
HNRNPU-222ENST00000639880 ZHX1Q9UKY1 873 aaPredicted RBP9.72□□□□□ -0.85
HNRNPU-222ENST00000639880 TPCN1Q9ULQ1 816 aa9.72□□□□□ -0.85
HNRNPU-222ENST00000639880 HECW2Q9P2P5 1572 aa9.72□□□□□ -0.85
HNRNPU-222ENST00000639880 KIF2AO00139 706 aaPredicted RBP9.72□□□□□ -0.85
HNRNPU-222ENST00000639880 SPTLC2O15270 562 aa9.72□□□□□ -0.85
HNRNPU-222ENST00000639880 ZFYP08048 801 aaPredicted RBP9.72□□□□□ -0.85
HNRNPU-222ENST00000639880 SLC4A8Q2Y0W8 1093 aa9.72□□□□□ -0.85
HNRNPU-222ENST00000639880 ARHGAP29Q52LW3 1261 aa9.72□□□□□ -0.85
HNRNPU-222ENST00000639880 MFSD6Q6ZSS7 791 aa9.72□□□□□ -0.85
HNRNPU-222ENST00000639880 KCNG4Q8TDN1 519 aa9.72□□□□□ -0.85
HNRNPU-222ENST00000639880 LEO1Q8WVC0 666 aaPredicted RBP9.72□□□□□ -0.85
HNRNPU-222ENST00000639880 ERCC4Q92889 916 aaPredicted RBP9.72□□□□□ -0.85
HNRNPU-222ENST00000639880 C19orf44Q9H6X5 657 aa9.72□□□□□ -0.85
HNRNPU-222ENST00000639880 MTMR6Q9Y217 621 aa9.72□□□□□ -0.85
HNRNPU-222ENST00000639880 LIG1P18858 919 aa9.71□□□□□ -0.85
HNRNPU-222ENST00000639880 TTF1Q15361 905 aaPredicted RBP9.71□□□□□ -0.85
HNRNPU-222ENST00000639880 CDK5RAP3Q96JB5 506 aa9.71□□□□□ -0.85
HNRNPU-222ENST00000639880 LSG1Q9H089 658 aaKnown RBP9.71□□□□□ -0.85
HNRNPU-222ENST00000639880 CEP131Q9UPN4 1083 aa9.71□□□□□ -0.85
HNRNPU-222ENST00000639880 USP6P35125 1406 aa9.71□□□□□ -0.85
HNRNPU-222ENST00000639880 CDK12Q9NYV4 1490 aaPredicted RBP9.71□□□□□ -0.85
HNRNPU-222ENST00000639880 EPB41L2O43491 1005 aaKnown RBP9.71□□□□□ -0.85
HNRNPU-222ENST00000639880 ADAMTS2O95450 1211 aa9.71□□□□□ -0.85
HNRNPU-222ENST00000639880 NEURL1BA8MQ27 555 aa9.71□□□□□ -0.86
HNRNPU-222ENST00000639880 UBASH3AP57075 661 aa9.71□□□□□ -0.86
HNRNPU-222ENST00000639880 IQCA1Q86XH1 822 aa9.71□□□□□ -0.86
HNRNPU-222ENST00000639880 TM6SF1Q9BZW5 370 aa9.71□□□□□ -0.86
HNRNPU-222ENST00000639880 SLC52A2Q9HAB3 445 aa9.71□□□□□ -0.86
HNRNPU-222ENST00000639880 CBX8Q9HC52 389 aa9.71□□□□□ -0.86
HNRNPU-222ENST00000639880 TLR7Q9NYK1 1049 aaKnown RBP9.71□□□□□ -0.86
HNRNPU-222ENST00000639880 LAMC1P11047 1609 aa9.71□□□□□ -0.86
HNRNPU-222ENST00000639880 QRICH2Q9H0J4 1663 aa9.71□□□□□ -0.86
HNRNPU-222ENST00000639880 PNPLA6Q8IY17 1366 aa9.71□□□□□ -0.86
HNRNPU-222ENST00000639880 ZSCAN12O43309 604 aa9.71□□□□□ -0.86
HNRNPU-222ENST00000639880 TMCO3Q6UWJ1 677 aa9.71□□□□□ -0.86
HNRNPU-222ENST00000639880 EXOC5O00471 708 aa9.7□□□□□ -0.86
HNRNPU-222ENST00000639880 CAVIN4Q5BKX8 364 aa9.7□□□□□ -0.86
HNRNPU-222ENST00000639880 KBTBD3Q8NAB2 608 aa9.7□□□□□ -0.86
HNRNPU-222ENST00000639880 CTCFLQ8NI51 663 aaPredicted RBP9.7□□□□□ -0.86
HNRNPU-222ENST00000639880 ZNHIT6Q9NWK9 470 aaKnown RBP9.7□□□□□ -0.86
HNRNPU-222ENST00000639880 EYA2O00167 538 aa9.7□□□□□ -0.86
HNRNPU-222ENST00000639880 IGSF3O75054 1194 aa9.7□□□□□ -0.86
HNRNPU-222ENST00000639880 IKQ13123 557 aaPredicted RBP9.7□□□□□ -0.86
HNRNPU-222ENST00000639880 STIM1Q13586 685 aa9.7□□□□□ -0.86
HNRNPU-222ENST00000639880 CUL4AQ13619 759 aa9.7□□□□□ -0.86
HNRNPU-222ENST00000639880 TTC6Q86TZ1 520 aa9.7□□□□□ -0.86
HNRNPU-222ENST00000639880 ZSWIM4Q9H7M6 989 aa9.7□□□□□ -0.86
HNRNPU-222ENST00000639880 ZSWIM6Q9HCJ5 1215 aa9.7□□□□□ -0.86
HNRNPU-222ENST00000639880 PAXBP1Q9Y5B6 917 aa9.7□□□□□ -0.86
HNRNPU-222ENST00000639880 TULP4Q9NRJ4 1543 aa9.7□□□□□ -0.86
HNRNPU-222ENST00000639880 CCDC66A2RUB6 948 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms