RNA–Protein interactions for RNA: ENST00000639811.1

NECAP1-219, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-219ENST00000639811 CAMTA2O94983 1202 aa11.79□□□□□ -0.52
NECAP1-219ENST00000639811 BRD1O95696 1058 aa11.79□□□□□ -0.52
NECAP1-219ENST00000639811 MCMDC2Q4G0Z9 681 aa11.79□□□□□ -0.52
NECAP1-219ENST00000639811 FOXD4L5Q5VV16 416 aaPredicted RBP11.79□□□□□ -0.52
NECAP1-219ENST00000639811 SUSD4Q5VX71 490 aa11.79□□□□□ -0.52
NECAP1-219ENST00000639811 MCTP1Q6DN14 999 aa11.79□□□□□ -0.52
NECAP1-219ENST00000639811 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.79□□□□□ -0.52
NECAP1-219ENST00000639811 FOXD4L4Q8WXT5 416 aaPredicted RBP11.79□□□□□ -0.52
NECAP1-219ENST00000639811 NGLY1Q96IV0 654 aa11.79□□□□□ -0.52
NECAP1-219ENST00000639811 CHAMP1Q96JM3 812 aa11.79□□□□□ -0.52
NECAP1-219ENST00000639811 AKAP2Q9Y2D5 859 aa11.79□□□□□ -0.52
NECAP1-219ENST00000639811 SH3TC1Q8TE82 1336 aa11.78□□□□□ -0.52
NECAP1-219ENST00000639811 ANKRD18BA2A2Z9 1011 aa11.78□□□□□ -0.52
NECAP1-219ENST00000639811 PTMSP20962 102 aa11.78□□□□□ -0.52
NECAP1-219ENST00000639811 LDHAL6AQ6ZMR3 332 aa11.78□□□□□ -0.52
NECAP1-219ENST00000639811 TSGA10IPQ3SY00 556 aa11.78□□□□□ -0.52
NECAP1-219ENST00000639811 SPEF2Q9C093 1822 aa11.77□□□□□ -0.52
NECAP1-219ENST00000639811 GOLGA6L22H0YM25 854 aa11.77□□□□□ -0.53
NECAP1-219ENST00000639811 SCARF1Q14162 830 aa11.77□□□□□ -0.53
NECAP1-219ENST00000639811 SKOR2Q2VWA4 1001 aaPredicted RBP11.77□□□□□ -0.53
NECAP1-219ENST00000639811 METTL24Q5JXM2 366 aa11.77□□□□□ -0.53
NECAP1-219ENST00000639811 ZMYM1Q5SVZ6 1142 aa11.77□□□□□ -0.53
NECAP1-219ENST00000639811 RNF20Q5VTR2 975 aa11.77□□□□□ -0.53
NECAP1-219ENST00000639811 VGLL2Q8N8G2 317 aa11.77□□□□□ -0.53
NECAP1-219ENST00000639811 SMARCC1Q92922 1105 aaPredicted RBP11.77□□□□□ -0.53
NECAP1-219ENST00000639811 COL5A3P25940 1745 aaPredicted RBP11.77□□□□□ -0.53
NECAP1-219ENST00000639811 HCLS1P14317 486 aaPredicted RBP11.77□□□□□ -0.53
NECAP1-219ENST00000639811 PSMA5P28066 241 aa11.77□□□□□ -0.53
NECAP1-219ENST00000639811 ST3GAL1Q11201 340 aa11.77□□□□□ -0.53
NECAP1-219ENST00000639811 ATP2B3Q16720 1220 aa11.77□□□□□ -0.53
NECAP1-219ENST00000639811 CCDC158Q5M9N0 1113 aa11.77□□□□□ -0.53
NECAP1-219ENST00000639811 TTC39AQ5SRH9 613 aa11.77□□□□□ -0.53
NECAP1-219ENST00000639811 PTF1AQ7RTS3 328 aa11.77□□□□□ -0.53
NECAP1-219ENST00000639811 HELLSQ9NRZ9 838 aa11.77□□□□□ -0.53
NECAP1-219ENST00000639811 LMBRD1Q9NUN5 540 aa11.77□□□□□ -0.53
NECAP1-219ENST00000639811 HMG20BQ9P0W2 317 aa11.77□□□□□ -0.53
NECAP1-219ENST00000639811 LRP5O75197 1615 aa11.76□□□□□ -0.53
NECAP1-219ENST00000639811 FSD2A1L4K1 749 aa11.76□□□□□ -0.53
NECAP1-219ENST00000639811 FAM177BA6PVY3 158 aa11.76□□□□□ -0.53
NECAP1-219ENST00000639811 RNF113AO15541 343 aaKnown RBP11.76□□□□□ -0.53
NECAP1-219ENST00000639811 FKBP4Q02790 459 aaKnown RBP eCLIP11.76□□□□□ -0.53
NECAP1-219ENST00000639811 GORABQ5T7V8 394 aa11.76□□□□□ -0.53
NECAP1-219ENST00000639811 TICAM2Q86XR7 235 aa11.76□□□□□ -0.53
NECAP1-219ENST00000639811 FNBP4Q8N3X1 1017 aaPredicted RBP11.76□□□□□ -0.53
NECAP1-219ENST00000639811 TCEANC2Q96MN5 208 aa11.76□□□□□ -0.53
NECAP1-219ENST00000639811 CNNM1Q9NRU3 951 aa11.76□□□□□ -0.53
NECAP1-219ENST00000639811 U3KPZ7 1027 aaPredicted RBP11.76□□□□□ -0.53
NECAP1-219ENST00000639811 RPS6KB1P23443 525 aa11.75□□□□□ -0.53
NECAP1-219ENST00000639811 KCNQ4P56696 695 aa11.75□□□□□ -0.53
NECAP1-219ENST00000639811 ME3Q16798 604 aa11.75□□□□□ -0.53
NECAP1-219ENST00000639811 BLOC1S2Q6QNY1 142 aa11.75□□□□□ -0.53
NECAP1-219ENST00000639811 CCDC83Q8IWF9 413 aa11.75□□□□□ -0.53
NECAP1-219ENST00000639811 LINC00116Q8NCU8 138 aa11.75□□□□□ -0.53
NECAP1-219ENST00000639811 ZSCAN31Q96LW9 406 aaPredicted RBP11.75□□□□□ -0.53
NECAP1-219ENST00000639811 UTP14AQ9BVJ6 771 aaKnown RBP11.75□□□□□ -0.53
NECAP1-219ENST00000639811 TPCN1Q9ULQ1 816 aa11.75□□□□□ -0.53
NECAP1-219ENST00000639811 MAST3O60307 1309 aa11.75□□□□□ -0.53
NECAP1-219ENST00000639811 DTNBO60941 627 aa11.75□□□□□ -0.53
NECAP1-219ENST00000639811 CYP21A2P08686 494 aa11.75□□□□□ -0.53
NECAP1-219ENST00000639811 ZAP70P43403 619 aa11.75□□□□□ -0.53
NECAP1-219ENST00000639811 PI16Q6UXB8 463 aa11.75□□□□□ -0.53
NECAP1-219ENST00000639811 AK7Q96M32 723 aa11.75□□□□□ -0.53
NECAP1-219ENST00000639811 DDX60Q8IY21 1712 aaKnown RBP11.75□□□□□ -0.53
NECAP1-219ENST00000639811 ZNF831Q5JPB2 1677 aa11.74□□□□□ -0.53
NECAP1-219ENST00000639811 M0R2C6 588 aa11.74□□□□□ -0.53
NECAP1-219ENST00000639811 NTSR2O95665 410 aa11.74□□□□□ -0.53
NECAP1-219ENST00000639811 TOB2Q14106 344 aaPredicted RBP11.74□□□□□ -0.53
NECAP1-219ENST00000639811 KLHL40Q2TBA0 621 aa11.74□□□□□ -0.53
NECAP1-219ENST00000639811 PARP10Q53GL7 1025 aa11.74□□□□□ -0.53
NECAP1-219ENST00000639811 ALDH8A1Q9H2A2 487 aaPredicted RBP11.74□□□□□ -0.53
NECAP1-219ENST00000639811 SH2B1Q9NRF2 756 aaPredicted RBP11.74□□□□□ -0.53
NECAP1-219ENST00000639811 NIP7Q9Y221 180 aaKnown RBP eCLIP11.74□□□□□ -0.53
NECAP1-219ENST00000639811 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.74□□□□□ -0.53
NECAP1-219ENST00000639811 PRPF40AO75400 957 aaKnown RBP11.74□□□□□ -0.53
NECAP1-219ENST00000639811 PDE8BO95263 885 aa11.74□□□□□ -0.53
NECAP1-219ENST00000639811 NECAB1Q8N987 351 aa11.74□□□□□ -0.53
NECAP1-219ENST00000639811 OSBP2Q969R2 916 aa11.74□□□□□ -0.53
NECAP1-219ENST00000639811 DSCC1Q9BVC3 393 aa11.74□□□□□ -0.53
NECAP1-219ENST00000639811 SEC31BQ9NQW1 1179 aa11.74□□□□□ -0.53
NECAP1-219ENST00000639811 DDX49Q9Y6V7 483 aaKnown RBP11.74□□□□□ -0.53
NECAP1-219ENST00000639811 ABCC12Q96J65 1359 aa11.74□□□□□ -0.53
NECAP1-219ENST00000639811 BCORQ6W2J9 1755 aa11.74□□□□□ -0.53
NECAP1-219ENST00000639811 A0A0G2JLW4 131 aa11.73□□□□□ -0.53
NECAP1-219ENST00000639811 MCAMP43121 646 aa11.73□□□□□ -0.53
NECAP1-219ENST00000639811 STOX1Q6ZVD7 989 aa11.73□□□□□ -0.53
NECAP1-219ENST00000639811 HELBQ8NG08 1087 aaPredicted RBP11.73□□□□□ -0.53
NECAP1-219ENST00000639811 USP21Q9UK80 565 aa11.73□□□□□ -0.53
NECAP1-219ENST00000639811 SMC3Q9UQE7 1217 aa11.73□□□□□ -0.53
NECAP1-219ENST00000639811 AKAP11Q9UKA4 1901 aa11.73□□□□□ -0.53
NECAP1-219ENST00000639811 WDR33Q9C0J8 1336 aaKnown RBP11.73□□□□□ -0.53
NECAP1-219ENST00000639811 GOLGA6L3A6NEY3 463 aa11.72□□□□□ -0.53
NECAP1-219ENST00000639811 HSPD1P10809 573 aaKnown RBP11.72□□□□□ -0.53
NECAP1-219ENST00000639811 KRT32Q14532 448 aa11.72□□□□□ -0.53
NECAP1-219ENST00000639811 SMIM5Q71RC9 77 aa11.72□□□□□ -0.53
NECAP1-219ENST00000639811 NEK1Q96PY6 1258 aa11.72□□□□□ -0.53
NECAP1-219ENST00000639811 BRPF3Q9ULD4 1205 aa11.72□□□□□ -0.53
NECAP1-219ENST00000639811 THSD7AQ9UPZ6 1657 aa11.72□□□□□ -0.53
NECAP1-219ENST00000639811 SYT1P21579 422 aa11.72□□□□□ -0.53
NECAP1-219ENST00000639811 FGFR2P21802 821 aa11.72□□□□□ -0.53
NECAP1-219ENST00000639811 GJB2P29033 226 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms