RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 ZBTB43O43298 467 aa15.82■□□□□ 0.12
SCARB2-215ENST00000639145 RNF113AO15541 343 aaKnown RBP15.82■□□□□ 0.12
SCARB2-215ENST00000639145 ECM2O94769 699 aaPredicted RBP15.82■□□□□ 0.12
SCARB2-215ENST00000639145 TNIP1Q15025 636 aa15.82■□□□□ 0.12
SCARB2-215ENST00000639145 RBM17Q96I25 401 aaKnown RBP15.82■□□□□ 0.12
SCARB2-215ENST00000639145 TBC1D32Q96NH3 1257 aa15.82■□□□□ 0.12
SCARB2-215ENST00000639145 TRPC5Q9UL62 973 aaPredicted RBP15.82■□□□□ 0.12
SCARB2-215ENST00000639145 GJA3Q9Y6H8 435 aa15.82■□□□□ 0.12
SCARB2-215ENST00000639145 NDUFB9Q9Y6M9 179 aa15.82■□□□□ 0.12
SCARB2-215ENST00000639145 IFIT1BQ5T764 474 aaKnown RBP15.82■□□□□ 0.12
SCARB2-215ENST00000639145 TTC41PQ6P2S7 1318 aa15.82■□□□□ 0.12
SCARB2-215ENST00000639145 MATR3P43243 847 aaKnown RBP eCLIP15.81■□□□□ 0.12
SCARB2-215ENST00000639145 BRINP3Q76B58 766 aa15.81■□□□□ 0.12
SCARB2-215ENST00000639145 CARD10Q9BWT7 1032 aa15.81■□□□□ 0.12
SCARB2-215ENST00000639145 DACH1Q9UI36 760 aa15.81■□□□□ 0.12
SCARB2-215ENST00000639145 SETD1BQ9UPS6 1966 aaKnown RBP15.81■□□□□ 0.12
SCARB2-215ENST00000639145 LOC102724428A0A0B4J2F2 783 aa15.81■□□□□ 0.12
SCARB2-215ENST00000639145 SYCE3A1L190 88 aa15.81■□□□□ 0.12
SCARB2-215ENST00000639145 HIBADHP31937 336 aaKnown RBP15.81■□□□□ 0.12
SCARB2-215ENST00000639145 SIK1P57059 783 aa15.81■□□□□ 0.12
SCARB2-215ENST00000639145 SYCP1Q15431 976 aa15.81■□□□□ 0.12
SCARB2-215ENST00000639145 FILIP1Q7Z7B0 1213 aa15.81■□□□□ 0.12
SCARB2-215ENST00000639145 KRT23Q9C075 422 aa15.81■□□□□ 0.12
SCARB2-215ENST00000639145 ABCC3O15438 1527 aa15.81■□□□□ 0.12
SCARB2-215ENST00000639145 UBA5Q9GZZ9 404 aa15.8■□□□□ 0.12
SCARB2-215ENST00000639145 STX6O43752 255 aa15.8■□□□□ 0.12
SCARB2-215ENST00000639145 TRIM37O94972 964 aa15.8■□□□□ 0.12
SCARB2-215ENST00000639145 TCIRG1Q13488 830 aa15.8■□□□□ 0.12
SCARB2-215ENST00000639145 TMX3Q96JJ7 454 aa15.8■□□□□ 0.12
SCARB2-215ENST00000639145 SCLT1Q96NL6 688 aa15.8■□□□□ 0.12
SCARB2-215ENST00000639145 KDM5CP41229 1560 aa15.8■□□□□ 0.12
SCARB2-215ENST00000639145 MAP3K11Q16584 847 aa15.8■□□□□ 0.12
SCARB2-215ENST00000639145 H0YIN7 160 aa15.79■□□□□ 0.12
SCARB2-215ENST00000639145 MBD4O95243 580 aa15.79■□□□□ 0.12
SCARB2-215ENST00000639145 TNNI3KQ59H18 835 aa15.79■□□□□ 0.12
SCARB2-215ENST00000639145 FPGT-TNNI3KV9GXZ4 949 aa15.79■□□□□ 0.12
SCARB2-215ENST00000639145 Q6ZUG5 572 aa15.79■□□□□ 0.12
SCARB2-215ENST00000639145 SMARCE1Q969G3 411 aa15.79■□□□□ 0.12
SCARB2-215ENST00000639145 PRC1O43663 620 aa15.79■□□□□ 0.12
SCARB2-215ENST00000639145 PPFIBP1Q86W92 1011 aa15.79■□□□□ 0.12
SCARB2-215ENST00000639145 XAGE2Q96GT9 111 aa15.79■□□□□ 0.12
SCARB2-215ENST00000639145 ZNHIT6Q9NWK9 470 aaKnown RBP15.79■□□□□ 0.12
SCARB2-215ENST00000639145 ERBB3P21860 1342 aa15.79■□□□□ 0.12
SCARB2-215ENST00000639145 MNS1Q8NEH6 495 aa15.78■□□□□ 0.12
SCARB2-215ENST00000639145 RAB34Q9BZG1 259 aa15.78■□□□□ 0.12
SCARB2-215ENST00000639145 GGA1Q9UJY5 639 aa15.78■□□□□ 0.12
SCARB2-215ENST00000639145 PUM3Q15397 648 aaKnown RBP15.78■□□□□ 0.12
SCARB2-215ENST00000639145 DPP8Q6V1X1 898 aaPredicted RBP15.78■□□□□ 0.12
SCARB2-215ENST00000639145 USP6P35125 1406 aa15.78■□□□□ 0.12
SCARB2-215ENST00000639145 IDEP14735 1019 aa15.78■□□□□ 0.12
SCARB2-215ENST00000639145 RTN1Q16799 776 aa15.78■□□□□ 0.12
SCARB2-215ENST00000639145 CKAP2LQ8IYA6 745 aa15.78■□□□□ 0.12
SCARB2-215ENST00000639145 CNNM2Q9H8M5 875 aa15.78■□□□□ 0.12
SCARB2-215ENST00000639145 LARGE2Q8N3Y3 721 aa15.78■□□□□ 0.12
SCARB2-215ENST00000639145 CCDC12Q8WUD4 166 aaPredicted RBP15.78■□□□□ 0.12
SCARB2-215ENST00000639145 NEURL1BA8MQ27 555 aa15.77■□□□□ 0.12
SCARB2-215ENST00000639145 TMEM266Q2M3C6 531 aa15.77■□□□□ 0.12
SCARB2-215ENST00000639145 CCDC129Q6ZRS4 1044 aa15.77■□□□□ 0.12
SCARB2-215ENST00000639145 WDR17Q8IZU2 1322 aa15.77■□□□□ 0.12
SCARB2-215ENST00000639145 CHMLP26374 656 aa15.77■□□□□ 0.12
SCARB2-215ENST00000639145 FAM43AQ8N2R8 423 aa15.77■□□□□ 0.12
SCARB2-215ENST00000639145 TNPO1Q92973 898 aaKnown RBP15.77■□□□□ 0.12
SCARB2-215ENST00000639145 CCDC39Q9UFE4 941 aa15.77■□□□□ 0.12
SCARB2-215ENST00000639145 PLCG2P16885 1265 aa15.77■□□□□ 0.11
SCARB2-215ENST00000639145 RXRAP19793 462 aa15.77■□□□□ 0.11
SCARB2-215ENST00000639145 FSIP1Q8NA03 581 aa15.77■□□□□ 0.11
SCARB2-215ENST00000639145 DEF6Q9H4E7 631 aa15.77■□□□□ 0.11
SCARB2-215ENST00000639145 CLASP1Q7Z460 1538 aa15.77■□□□□ 0.11
SCARB2-215ENST00000639145 RPS8P62241 208 aaKnown RBP15.76■□□□□ 0.11
SCARB2-215ENST00000639145 TEX11Q8IYF3 940 aa15.76■□□□□ 0.11
SCARB2-215ENST00000639145 SAMM50Q9Y512 469 aa15.76■□□□□ 0.11
SCARB2-215ENST00000639145 TMTC2Q8N394 836 aa15.76■□□□□ 0.11
SCARB2-215ENST00000639145 ZKSCAN3Q9BRR0 538 aa15.76■□□□□ 0.11
SCARB2-215ENST00000639145 USP44Q9H0E7 712 aa15.76■□□□□ 0.11
SCARB2-215ENST00000639145 DENND2AQ9ULE3 1009 aa15.76■□□□□ 0.11
SCARB2-215ENST00000639145 ZBTB1Q9Y2K1 713 aa15.76■□□□□ 0.11
SCARB2-215ENST00000639145 CLTCL1P53675 1640 aa15.76■□□□□ 0.11
SCARB2-215ENST00000639145 UBA7P41226 1012 aa15.76■□□□□ 0.11
SCARB2-215ENST00000639145 NOM1Q5C9Z4 860 aaKnown RBP15.76■□□□□ 0.11
SCARB2-215ENST00000639145 PLEKHF1Q96S99 279 aa15.76■□□□□ 0.11
SCARB2-215ENST00000639145 ALG1Q9BT22 464 aa15.76■□□□□ 0.11
SCARB2-215ENST00000639145 SAP30BPQ9UHR5 308 aaKnown RBP15.76■□□□□ 0.11
SCARB2-215ENST00000639145 PROSER3Q2NL68 480 aa15.76■□□□□ 0.11
SCARB2-215ENST00000639145 BIN1O00499 593 aa15.75■□□□□ 0.11
SCARB2-215ENST00000639145 CPA1P15085 419 aa15.75■□□□□ 0.11
SCARB2-215ENST00000639145 LIG1P18858 919 aa15.75■□□□□ 0.11
SCARB2-215ENST00000639145 HEATR3Q7Z4Q2 680 aa15.75■□□□□ 0.11
SCARB2-215ENST00000639145 PAF1Q8N7H5 531 aa15.75■□□□□ 0.11
SCARB2-215ENST00000639145 CFAP100Q494V2 611 aa15.75■□□□□ 0.11
SCARB2-215ENST00000639145 USPL1Q5W0Q7 1092 aa15.75■□□□□ 0.11
SCARB2-215ENST00000639145 CREB3L3Q68CJ9 461 aa15.75■□□□□ 0.11
SCARB2-215ENST00000639145 IGSF1Q8N6C5 1336 aa15.75■□□□□ 0.11
SCARB2-215ENST00000639145 PRDM1O75626 825 aa15.74■□□□□ 0.11
SCARB2-215ENST00000639145 FAM177A1Q8N128 213 aaPredicted RBP15.74■□□□□ 0.11
SCARB2-215ENST00000639145 CNNM3Q8NE01 707 aa15.74■□□□□ 0.11
SCARB2-215ENST00000639145 TCP11L1Q9NUJ3 509 aa15.74■□□□□ 0.11
SCARB2-215ENST00000639145 EIF5P55010 431 aaKnown RBP15.74■□□□□ 0.11
SCARB2-215ENST00000639145 FAM135BQ49AJ0 1406 aa15.74■□□□□ 0.11
SCARB2-215ENST00000639145 BCORL1Q5H9F3 1711 aa15.74■□□□□ 0.11
SCARB2-215ENST00000639145 CAGE1Q8TC20 777 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms