RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 TRPM3Q9HCF6 1732 aaPredicted RBP9.92□□□□□ -0.82
SCARB2-209ENST00000638409 SHPRHQ149N8 1683 aa9.92□□□□□ -0.82
SCARB2-209ENST00000638409 AKAP12Q02952 1782 aa9.92□□□□□ -0.82
SCARB2-209ENST00000638409 ENPP3O14638 875 aa9.92□□□□□ -0.82
SCARB2-209ENST00000638409 FOXO3O43524 673 aa9.92□□□□□ -0.82
SCARB2-209ENST00000638409 PDGFRBP09619 1106 aa9.92□□□□□ -0.82
SCARB2-209ENST00000638409 ENOX2Q16206 610 aaKnown RBP9.92□□□□□ -0.82
SCARB2-209ENST00000638409 THRAP3Q9Y2W1 955 aaKnown RBP9.92□□□□□ -0.82
SCARB2-209ENST00000638409 SBNO1A3KN83 1393 aa9.92□□□□□ -0.82
SCARB2-209ENST00000638409 CPSF1Q10570 1443 aaKnown RBP9.92□□□□□ -0.82
SCARB2-209ENST00000638409 ATP1A2P50993 1020 aa9.92□□□□□ -0.82
SCARB2-209ENST00000638409 APLP1P51693 650 aa9.92□□□□□ -0.82
SCARB2-209ENST00000638409 GTF2IP78347 998 aa9.92□□□□□ -0.82
SCARB2-209ENST00000638409 PLCB3Q01970 1234 aa9.92□□□□□ -0.82
SCARB2-209ENST00000638409 LRRC59Q96AG4 307 aaKnown RBP9.92□□□□□ -0.82
SCARB2-209ENST00000638409 PRKD2Q9BZL6 878 aa9.92□□□□□ -0.82
SCARB2-209ENST00000638409 SLC34A2O95436 690 aa9.91□□□□□ -0.82
SCARB2-209ENST00000638409 ATF4P18848 351 aaPredicted RBP9.91□□□□□ -0.82
SCARB2-209ENST00000638409 UBA5Q9GZZ9 404 aa9.91□□□□□ -0.82
SCARB2-209ENST00000638409 CABP1Q9NZU7 370 aa9.91□□□□□ -0.82
SCARB2-209ENST00000638409 PCDHB9Q9Y5E1 797 aa9.91□□□□□ -0.82
SCARB2-209ENST00000638409 ACEP12821 1306 aa9.91□□□□□ -0.82
SCARB2-209ENST00000638409 COL22A1Q8NFW1 1626 aaPredicted RBP9.91□□□□□ -0.82
SCARB2-209ENST00000638409 NDUFB5O43674 189 aa9.91□□□□□ -0.82
SCARB2-209ENST00000638409 EIF3JO75822 258 aaKnown RBP9.91□□□□□ -0.82
SCARB2-209ENST00000638409 SERINC3Q13530 473 aa9.91□□□□□ -0.82
SCARB2-209ENST00000638409 KRT28Q7Z3Y7 464 aa9.91□□□□□ -0.82
SCARB2-209ENST00000638409 TATDN2Q93075 761 aa9.91□□□□□ -0.82
SCARB2-209ENST00000638409 OCSTAMPQ9BR26 566 aa9.91□□□□□ -0.82
SCARB2-209ENST00000638409 MAP10Q9P2G4 905 aa9.91□□□□□ -0.82
SCARB2-209ENST00000638409 NOD1Q9Y239 953 aa9.91□□□□□ -0.82
SCARB2-209ENST00000638409 OXLD1Q5BKU9 147 aa9.9□□□□□ -0.82
SCARB2-209ENST00000638409 DDX17Q92841 729 aaKnown RBP9.9□□□□□ -0.82
SCARB2-209ENST00000638409 NEUROD4Q9HD90 331 aa9.9□□□□□ -0.82
SCARB2-209ENST00000638409 CD163L1Q9NR16 1453 aa9.9□□□□□ -0.82
SCARB2-209ENST00000638409 JCADQ9P266 1359 aa9.9□□□□□ -0.83
SCARB2-209ENST00000638409 CCDC85CA6NKD9 419 aa9.9□□□□□ -0.83
SCARB2-209ENST00000638409 EVA1CP58658 441 aa9.9□□□□□ -0.83
SCARB2-209ENST00000638409 C11orf96Q7Z7L8 435 aa9.9□□□□□ -0.83
SCARB2-209ENST00000638409 TRIM50Q86XT4 487 aa9.9□□□□□ -0.83
SCARB2-209ENST00000638409 NGDNQ8NEJ9 315 aaKnown RBP9.9□□□□□ -0.83
SCARB2-209ENST00000638409 SRPK1Q96SB4 655 aaKnown RBP9.9□□□□□ -0.83
SCARB2-209ENST00000638409 PCDHGA4Q9Y5G9 962 aa9.9□□□□□ -0.83
SCARB2-209ENST00000638409 SSH2Q76I76 1423 aa9.9□□□□□ -0.83
SCARB2-209ENST00000638409 MYOM1P52179 1685 aa9.89□□□□□ -0.83
SCARB2-209ENST00000638409 ALS2Q96Q42 1657 aa9.89□□□□□ -0.83
SCARB2-209ENST00000638409 MON2Q7Z3U7 1717 aa9.89□□□□□ -0.83
SCARB2-209ENST00000638409 SPATA31A3Q5VYP0 1347 aa9.89□□□□□ -0.83
SCARB2-209ENST00000638409 TNFRSF10BO14763 440 aa9.89□□□□□ -0.83
SCARB2-209ENST00000638409 WEE1P30291 646 aa9.89□□□□□ -0.83
SCARB2-209ENST00000638409 SETQ01105 290 aaPredicted RBP9.89□□□□□ -0.83
SCARB2-209ENST00000638409 MAP9Q49MG5 647 aa9.89□□□□□ -0.83
SCARB2-209ENST00000638409 ZNF654Q8IZM8 581 aa9.89□□□□□ -0.83
SCARB2-209ENST00000638409 USP6P35125 1406 aa9.88□□□□□ -0.83
SCARB2-209ENST00000638409 TNS3Q68CZ2 1445 aa9.88□□□□□ -0.83
SCARB2-209ENST00000638409 NRKQ7Z2Y5 1582 aa9.88□□□□□ -0.83
SCARB2-209ENST00000638409 MZF1P28698 734 aaPredicted RBP9.88□□□□□ -0.83
SCARB2-209ENST00000638409 LONRF3Q496Y0 759 aa9.88□□□□□ -0.83
SCARB2-209ENST00000638409 C4orf46Q504U0 113 aa9.88□□□□□ -0.83
SCARB2-209ENST00000638409 PNPLA6Q8IY17 1366 aa9.88□□□□□ -0.83
SCARB2-209ENST00000638409 C11orf95C9JLR9 678 aaPredicted RBP9.87□□□□□ -0.83
SCARB2-209ENST00000638409 PRC1O43663 620 aa9.87□□□□□ -0.83
SCARB2-209ENST00000638409 FGD1P98174 961 aa9.87□□□□□ -0.83
SCARB2-209ENST00000638409 CCDC85AQ96PX6 553 aaPredicted RBP9.87□□□□□ -0.83
SCARB2-209ENST00000638409 SAP130Q9H0E3 1048 aa9.87□□□□□ -0.83
SCARB2-209ENST00000638409 SLC12A5Q9H2X9 1139 aa9.87□□□□□ -0.83
SCARB2-209ENST00000638409 FXR2P51116 673 aaKnown RBP eCLIP9.87□□□□□ -0.83
SCARB2-209ENST00000638409 CCAR1Q8IX12 1150 aaKnown RBP9.87□□□□□ -0.83
SCARB2-209ENST00000638409 SPATA31A6Q5VVP1 1343 aa9.87□□□□□ -0.83
SCARB2-209ENST00000638409 ARHGEF10O15013 1369 aa9.87□□□□□ -0.83
SCARB2-209ENST00000638409 ANKRD36BQ8N2N9 1353 aa9.87□□□□□ -0.83
SCARB2-209ENST00000638409 PNMA6FA0A0J9YX94 578 aa9.86□□□□□ -0.83
SCARB2-209ENST00000638409 FAM13AO94988 1023 aa9.86□□□□□ -0.83
SCARB2-209ENST00000638409 MAF1Q9H063 256 aa9.86□□□□□ -0.83
SCARB2-209ENST00000638409 ZNF408Q9H9D4 720 aa9.86□□□□□ -0.83
SCARB2-209ENST00000638409 FANCLQ9NW38 375 aa9.86□□□□□ -0.83
SCARB2-209ENST00000638409 MED1Q15648 1581 aaPredicted RBP9.86□□□□□ -0.83
SCARB2-209ENST00000638409 CCDC189A1A4V9 331 aa9.86□□□□□ -0.83
SCARB2-209ENST00000638409 FAM221BA6H8Z2 402 aa9.86□□□□□ -0.83
SCARB2-209ENST00000638409 AAMPQ13685 434 aa9.86□□□□□ -0.83
SCARB2-209ENST00000638409 USP54Q70EL1 1684 aa9.86□□□□□ -0.83
SCARB2-209ENST00000638409 PAK2Q13177 524 aa9.86□□□□□ -0.83
SCARB2-209ENST00000638409 PLEKHG4Q58EX7 1191 aa9.86□□□□□ -0.83
SCARB2-209ENST00000638409 HDGFL2Q7Z4V5 671 aaPredicted RBP9.86□□□□□ -0.83
SCARB2-209ENST00000638409 VPS37DQ86XT2 251 aa9.86□□□□□ -0.83
SCARB2-209ENST00000638409 CKAP2LQ8IYA6 745 aa9.86□□□□□ -0.83
SCARB2-209ENST00000638409 A0A1W2PP64 1363 aa9.85□□□□□ -0.83
SCARB2-209ENST00000638409 KTN1Q86UP2 1357 aaKnown RBP9.85□□□□□ -0.83
SCARB2-209ENST00000638409 CRYBG1Q9Y4K1 1723 aa9.85□□□□□ -0.83
SCARB2-209ENST00000638409 FZD6O60353 706 aa9.85□□□□□ -0.83
SCARB2-209ENST00000638409 NPR3P17342 541 aa9.85□□□□□ -0.83
SCARB2-209ENST00000638409 NKX2-3Q8TAU0 364 aa9.85□□□□□ -0.83
SCARB2-209ENST00000638409 NIF3L1Q9GZT8 377 aa9.85□□□□□ -0.83
SCARB2-209ENST00000638409 RBM19Q9Y4C8 960 aaKnown RBP9.85□□□□□ -0.83
SCARB2-209ENST00000638409 MRVI1Q9Y6F6 885 aa9.85□□□□□ -0.83
SCARB2-209ENST00000638409 KIF7Q2M1P5 1343 aa9.85□□□□□ -0.83
SCARB2-209ENST00000638409 TTC21AQ8NDW8 1320 aa9.85□□□□□ -0.83
SCARB2-209ENST00000638409 EDC4Q6P2E9 1401 aaKnown RBP9.85□□□□□ -0.83
SCARB2-209ENST00000638409 GJA8P48165 433 aa9.85□□□□□ -0.83
SCARB2-209ENST00000638409 ATN1P54259 1190 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms