RNA–Protein interactions for RNA: ENST00000638139.1

SMARCA2-265, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 2,675 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-265ENST00000638139 RFX7Q2KHR2 1363 aa11.86□□□□□ -0.51
SMARCA2-265ENST00000638139 MCMDC2Q4G0Z9 681 aa11.85□□□□□ -0.51
SMARCA2-265ENST00000638139 LMOD2Q6P5Q4 547 aa11.85□□□□□ -0.51
SMARCA2-265ENST00000638139 PDCL2Q8N4E4 241 aa11.85□□□□□ -0.51
SMARCA2-265ENST00000638139 SMARCC2Q8TAQ2 1214 aa11.85□□□□□ -0.51
SMARCA2-265ENST00000638139 ORAI2Q96SN7 254 aa11.85□□□□□ -0.51
SMARCA2-265ENST00000638139 DBNDD2Q9BQY9 259 aa11.85□□□□□ -0.51
SMARCA2-265ENST00000638139 CFAP45Q9UL16 551 aa11.85□□□□□ -0.51
SMARCA2-265ENST00000638139 ADD1P35611 737 aaKnown RBP11.85□□□□□ -0.51
SMARCA2-265ENST00000638139 STOX1Q6ZVD7 989 aa11.85□□□□□ -0.51
SMARCA2-265ENST00000638139 HAUS7Q99871 368 aa11.85□□□□□ -0.51
SMARCA2-265ENST00000638139 SLC52A2Q9HAB3 445 aa11.85□□□□□ -0.51
SMARCA2-265ENST00000638139 KDM6AO15550 1401 aaPredicted RBP11.85□□□□□ -0.51
SMARCA2-265ENST00000638139 CBX1P83916 185 aa11.84□□□□□ -0.51
SMARCA2-265ENST00000638139 CEBPZQ03701 1054 aaKnown RBP11.84□□□□□ -0.51
SMARCA2-265ENST00000638139 IQCB1Q15051 598 aa11.84□□□□□ -0.51
SMARCA2-265ENST00000638139 CCDC144BQ3MJ40 725 aa11.84□□□□□ -0.51
SMARCA2-265ENST00000638139 ANKRD13DQ6ZTN6 518 aa11.84□□□□□ -0.51
SMARCA2-265ENST00000638139 CCDC144CPQ8IYA2 1237 aa11.84□□□□□ -0.51
SMARCA2-265ENST00000638139 CACTINQ8WUQ7 758 aaKnown RBP11.84□□□□□ -0.51
SMARCA2-265ENST00000638139 C16orf45Q96MC5 204 aaPredicted RBP11.84□□□□□ -0.51
SMARCA2-265ENST00000638139 CLIP2Q9UDT6 1046 aa11.84□□□□□ -0.51
SMARCA2-265ENST00000638139 PFKFB2O60825 505 aa11.84□□□□□ -0.51
SMARCA2-265ENST00000638139 CDC25BP30305 580 aa11.84□□□□□ -0.51
SMARCA2-265ENST00000638139 PIP4K2AP48426 406 aaPredicted RBP11.84□□□□□ -0.51
SMARCA2-265ENST00000638139 RABL6Q3YEC7 729 aaPredicted RBP11.84□□□□□ -0.51
SMARCA2-265ENST00000638139 DDX46Q7L014 1031 aaKnown RBP11.84□□□□□ -0.51
SMARCA2-265ENST00000638139 LRP10Q7Z4F1 713 aa11.84□□□□□ -0.51
SMARCA2-265ENST00000638139 LLPHQ9BRT6 129 aaKnown RBP11.84□□□□□ -0.51
SMARCA2-265ENST00000638139 CAVIN2O95810 425 aa11.83□□□□□ -0.51
SMARCA2-265ENST00000638139 FOSBP53539 338 aa11.83□□□□□ -0.51
SMARCA2-265ENST00000638139 C11orf57Q6ZUT1 292 aaPredicted RBP11.83□□□□□ -0.51
SMARCA2-265ENST00000638139 UBE3BQ7Z3V4 1068 aa11.83□□□□□ -0.51
SMARCA2-265ENST00000638139 NFATC2IPQ8NCF5 419 aa11.83□□□□□ -0.51
SMARCA2-265ENST00000638139 NSUN7Q8NE18 718 aaKnown RBP11.83□□□□□ -0.51
SMARCA2-265ENST00000638139 ZNF496Q96IT1 587 aaPredicted RBP11.83□□□□□ -0.51
SMARCA2-265ENST00000638139 RCOR1Q9UKL0 485 aa11.83□□□□□ -0.51
SMARCA2-265ENST00000638139 ARFGEF2Q9Y6D5 1785 aa11.83□□□□□ -0.52
SMARCA2-265ENST00000638139 CTDNEP1O95476 244 aa11.83□□□□□ -0.52
SMARCA2-265ENST00000638139 FGD1P98174 961 aa11.83□□□□□ -0.52
SMARCA2-265ENST00000638139 CCAR1Q8IX12 1150 aaKnown RBP11.83□□□□□ -0.52
SMARCA2-265ENST00000638139 FTOQ9C0B1 505 aaKnown RBP eCLIP11.83□□□□□ -0.52
SMARCA2-265ENST00000638139 USP16Q9Y5T5 823 aa11.83□□□□□ -0.52
SMARCA2-265ENST00000638139 SMTNL1A8MU46 457 aa11.83□□□□□ -0.52
SMARCA2-265ENST00000638139 TNNT1P13805 278 aa11.83□□□□□ -0.52
SMARCA2-265ENST00000638139 ZSCAN20P17040 1043 aaPredicted RBP11.83□□□□□ -0.52
SMARCA2-265ENST00000638139 NAA16Q6N069 864 aaPredicted RBP11.83□□□□□ -0.52
SMARCA2-265ENST00000638139 SARM1Q6SZW1 724 aa11.83□□□□□ -0.52
SMARCA2-265ENST00000638139 ANKLE2Q86XL3 938 aa11.83□□□□□ -0.52
SMARCA2-265ENST00000638139 GOLPH3LQ9H4A5 285 aa11.83□□□□□ -0.52
SMARCA2-265ENST00000638139 TRPM3Q9HCF6 1732 aaPredicted RBP11.82□□□□□ -0.52
SMARCA2-265ENST00000638139 APOBRQ0VD83 1088 aa11.82□□□□□ -0.52
SMARCA2-265ENST00000638139 SLFNL1Q499Z3 407 aa11.82□□□□□ -0.52
SMARCA2-265ENST00000638139 DHX32Q7L7V1 743 aaKnown RBP11.82□□□□□ -0.52
SMARCA2-265ENST00000638139 KBTBD3Q8NAB2 608 aa11.82□□□□□ -0.52
SMARCA2-265ENST00000638139 CCDC9Q9Y3X0 531 aaKnown RBP11.82□□□□□ -0.52
SMARCA2-265ENST00000638139 ERBB3P21860 1342 aa11.82□□□□□ -0.52
SMARCA2-265ENST00000638139 SH3TC1Q8TE82 1336 aa11.82□□□□□ -0.52
SMARCA2-265ENST00000638139 PTPDC1A2A3K4 754 aa11.82□□□□□ -0.52
SMARCA2-265ENST00000638139 ATP5J2-PTCD1G3V325 749 aa11.82□□□□□ -0.52
SMARCA2-265ENST00000638139 GOLGA6L19H0YKK7 550 aa11.82□□□□□ -0.52
SMARCA2-265ENST00000638139 CTAGE5O15320 804 aa11.82□□□□□ -0.52
SMARCA2-265ENST00000638139 PTCD1O75127 700 aaKnown RBP11.82□□□□□ -0.52
SMARCA2-265ENST00000638139 HMGB1P09429 215 aaKnown RBP11.82□□□□□ -0.52
SMARCA2-265ENST00000638139 DMTNQ08495 405 aa11.82□□□□□ -0.52
SMARCA2-265ENST00000638139 NCBP1Q09161 790 aaKnown RBP11.82□□□□□ -0.52
SMARCA2-265ENST00000638139 STX1AQ16623 288 aa11.82□□□□□ -0.52
SMARCA2-265ENST00000638139 A0A087WZG4 1122 aa11.81□□□□□ -0.52
SMARCA2-265ENST00000638139 PHKG2P15735 406 aa11.81□□□□□ -0.52
SMARCA2-265ENST00000638139 SNW1Q13573 536 aaKnown RBP11.81□□□□□ -0.52
SMARCA2-265ENST00000638139 TPD52L1Q16890 204 aaPredicted RBP11.81□□□□□ -0.52
SMARCA2-265ENST00000638139 RAPGEF4Q8WZA2 1011 aa11.81□□□□□ -0.52
SMARCA2-265ENST00000638139 USP28Q96RU2 1077 aa11.81□□□□□ -0.52
SMARCA2-265ENST00000638139 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.81□□□□□ -0.52
SMARCA2-265ENST00000638139 SPDYE4A6NLX3 237 aa11.81□□□□□ -0.52
SMARCA2-265ENST00000638139 SNRPA1P09661 255 aaKnown RBP11.81□□□□□ -0.52
SMARCA2-265ENST00000638139 U2AF2P26368 475 aaKnown RBP eCLIP11.81□□□□□ -0.52
SMARCA2-265ENST00000638139 CASP7P55210 303 aa11.81□□□□□ -0.52
SMARCA2-265ENST00000638139 CCT2P78371 535 aaKnown RBP11.81□□□□□ -0.52
SMARCA2-265ENST00000638139 EXOSC10Q01780 885 aaKnown RBP11.81□□□□□ -0.52
SMARCA2-265ENST00000638139 ARID5BQ14865 1188 aa11.81□□□□□ -0.52
SMARCA2-265ENST00000638139 LRRC8AQ8IWT6 810 aa11.81□□□□□ -0.52
SMARCA2-265ENST00000638139 MRFAP1L1Q96HT8 127 aa11.81□□□□□ -0.52
SMARCA2-265ENST00000638139 PALLDQ8WX93 1383 aa11.81□□□□□ -0.52
SMARCA2-265ENST00000638139 A0A0G2JLW4 131 aa11.8□□□□□ -0.52
SMARCA2-265ENST00000638139 SYCP1Q15431 976 aa11.8□□□□□ -0.52
SMARCA2-265ENST00000638139 UTP14CQ5TAP6 766 aaKnown RBP11.8□□□□□ -0.52
SMARCA2-265ENST00000638139 ENGASEQ8NFI3 743 aa11.8□□□□□ -0.52
SMARCA2-265ENST00000638139 AGXT2Q9BYV1 514 aa11.8□□□□□ -0.52
SMARCA2-265ENST00000638139 A0A087WWV3 80 aa11.8□□□□□ -0.52
SMARCA2-265ENST00000638139 GOLIM4O00461 696 aa11.8□□□□□ -0.52
SMARCA2-265ENST00000638139 ZC3H6P61129 1189 aaKnown RBP11.8□□□□□ -0.52
SMARCA2-265ENST00000638139 LMBR1LQ6UX01 489 aa11.8□□□□□ -0.52
SMARCA2-265ENST00000638139 CCDC73Q6ZRK6 1079 aa11.8□□□□□ -0.52
SMARCA2-265ENST00000638139 KRT28Q7Z3Y7 464 aa11.8□□□□□ -0.52
SMARCA2-265ENST00000638139 DSCC1Q9BVC3 393 aa11.8□□□□□ -0.52
SMARCA2-265ENST00000638139 NCOA5Q9HCD5 579 aaKnown RBP11.8□□□□□ -0.52
SMARCA2-265ENST00000638139 HELLSQ9NRZ9 838 aa11.8□□□□□ -0.52
SMARCA2-265ENST00000638139 NLRP2Q9NX02 1062 aa11.8□□□□□ -0.52
SMARCA2-265ENST00000638139 ILDR1Q86SU0 546 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms