RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 TRIM28Q13263 835 aaKnown RBP18.4■□□□□ 0.54
SCN8A-214ENST00000637709 KBTBD3Q8NAB2 608 aa18.4■□□□□ 0.54
SCN8A-214ENST00000637709 CCDC87Q9NVE4 849 aa18.4■□□□□ 0.54
SCN8A-214ENST00000637709 LIMCH1Q9UPQ0 1083 aa18.4■□□□□ 0.54
SCN8A-214ENST00000637709 PALLDQ8WX93 1383 aa18.4■□□□□ 0.54
SCN8A-214ENST00000637709 SEC31BQ9NQW1 1179 aa18.39■□□□□ 0.53
SCN8A-214ENST00000637709 NSFL1CQ9UNZ2 370 aaKnown RBP18.39■□□□□ 0.53
SCN8A-214ENST00000637709 MYH3P11055 1940 aa18.39■□□□□ 0.53
SCN8A-214ENST00000637709 CSF1RP07333 972 aa18.39■□□□□ 0.53
SCN8A-214ENST00000637709 IL6STP40189 918 aaPredicted RBP18.39■□□□□ 0.53
SCN8A-214ENST00000637709 ST3GAL1Q11201 340 aa18.39■□□□□ 0.53
SCN8A-214ENST00000637709 ME3Q16798 604 aa18.39■□□□□ 0.53
SCN8A-214ENST00000637709 TTC39AQ5SRH9 613 aa18.39■□□□□ 0.53
SCN8A-214ENST00000637709 ZSWIM6Q9HCJ5 1215 aa18.39■□□□□ 0.53
SCN8A-214ENST00000637709 TPCN1Q9ULQ1 816 aa18.39■□□□□ 0.53
SCN8A-214ENST00000637709 PPFIA3O75145 1194 aa18.38■□□□□ 0.53
SCN8A-214ENST00000637709 EIF5P55010 431 aaKnown RBP18.38■□□□□ 0.53
SCN8A-214ENST00000637709 BICDL1Q6ZP65 573 aa18.38■□□□□ 0.53
SCN8A-214ENST00000637709 GAS2L3Q86XJ1 694 aa18.38■□□□□ 0.53
SCN8A-214ENST00000637709 IL17RAQ96F46 866 aa18.38■□□□□ 0.53
SCN8A-214ENST00000637709 RBM27Q9P2N5 1060 aaKnown RBP18.38■□□□□ 0.53
SCN8A-214ENST00000637709 ANKRD36CQ5JPF3 1778 aa18.38■□□□□ 0.53
SCN8A-214ENST00000637709 MYO5AQ9Y4I1 1855 aaKnown RBP18.38■□□□□ 0.53
SCN8A-214ENST00000637709 LMBRD1Q9NUN5 540 aa18.38■□□□□ 0.53
SCN8A-214ENST00000637709 GOLGA6L22H0YM25 854 aa18.37■□□□□ 0.53
SCN8A-214ENST00000637709 ZAP70P43403 619 aa18.37■□□□□ 0.53
SCN8A-214ENST00000637709 MCMDC2Q4G0Z9 681 aa18.37■□□□□ 0.53
SCN8A-214ENST00000637709 RIC1Q4ADV7 1423 aa18.37■□□□□ 0.53
SCN8A-214ENST00000637709 M0R2C6 588 aa18.37■□□□□ 0.53
SCN8A-214ENST00000637709 CIAO1O76071 339 aa18.37■□□□□ 0.53
SCN8A-214ENST00000637709 CYP21A2P08686 494 aa18.37■□□□□ 0.53
SCN8A-214ENST00000637709 CAVIN1Q6NZI2 390 aaKnown RBP18.37■□□□□ 0.53
SCN8A-214ENST00000637709 CCDC24Q8N4L8 307 aa18.37■□□□□ 0.53
SCN8A-214ENST00000637709 THRAP3Q9Y2W1 955 aaKnown RBP18.37■□□□□ 0.53
SCN8A-214ENST00000637709 RPAP1Q9BWH6 1393 aaPredicted RBP18.36■□□□□ 0.53
SCN8A-214ENST00000637709 ANKRD18BA2A2Z9 1011 aa18.36■□□□□ 0.53
SCN8A-214ENST00000637709 GOLGA6L3A6NEY3 463 aa18.36■□□□□ 0.53
SCN8A-214ENST00000637709 TTLL5Q6EMB2 1281 aa18.36■□□□□ 0.53
SCN8A-214ENST00000637709 CHST3Q7LGC8 479 aa18.36■□□□□ 0.53
SCN8A-214ENST00000637709 NIP7Q9Y221 180 aaKnown RBP eCLIP18.36■□□□□ 0.53
SCN8A-214ENST00000637709 RIPOR2Q9Y4F9 1068 aa18.36■□□□□ 0.53
SCN8A-214ENST00000637709 TAF1P21675 1872 aa18.36■□□□□ 0.53
SCN8A-214ENST00000637709 EPB41L2O43491 1005 aaKnown RBP18.35■□□□□ 0.53
SCN8A-214ENST00000637709 BRD1O95696 1058 aa18.35■□□□□ 0.53
SCN8A-214ENST00000637709 ATP2B3Q16720 1220 aa18.35■□□□□ 0.53
SCN8A-214ENST00000637709 BLOC1S2Q6QNY1 142 aa18.35■□□□□ 0.53
SCN8A-214ENST00000637709 ZNF34Q8IZ26 560 aa18.35■□□□□ 0.53
SCN8A-214ENST00000637709 XRCC6P12956 609 aaKnown RBP eCLIP18.34■□□□□ 0.53
SCN8A-214ENST00000637709 WASHC4Q2M389 1173 aa18.34■□□□□ 0.53
SCN8A-214ENST00000637709 CCDC158Q5M9N0 1113 aa18.34■□□□□ 0.53
SCN8A-214ENST00000637709 STOX1Q6ZVD7 989 aa18.34■□□□□ 0.53
SCN8A-214ENST00000637709 LINC00116Q8NCU8 138 aa18.34■□□□□ 0.53
SCN8A-214ENST00000637709 GPT2Q8TD30 523 aa18.34■□□□□ 0.53
SCN8A-214ENST00000637709 INTS4Q96HW7 963 aaKnown RBP18.34■□□□□ 0.53
SCN8A-214ENST00000637709 CDCA7Q9BWT1 371 aaPredicted RBP18.34■□□□□ 0.53
SCN8A-214ENST00000637709 PLA2G12BQ9BX93 195 aa18.34■□□□□ 0.53
SCN8A-214ENST00000637709 SPEF2Q9C093 1822 aa18.34■□□□□ 0.53
SCN8A-214ENST00000637709 MAST3O60307 1309 aa18.34■□□□□ 0.53
SCN8A-214ENST00000637709 WTIPA6NIX2 430 aaPredicted RBP18.34■□□□□ 0.53
SCN8A-214ENST00000637709 GJB2P29033 226 aa18.34■□□□□ 0.53
SCN8A-214ENST00000637709 OSBP2Q969R2 916 aa18.34■□□□□ 0.53
SCN8A-214ENST00000637709 CAMTA2O94983 1202 aa18.33■□□□□ 0.53
SCN8A-214ENST00000637709 MCAMP43121 646 aa18.33■□□□□ 0.53
SCN8A-214ENST00000637709 HAND2P61296 217 aa18.33■□□□□ 0.53
SCN8A-214ENST00000637709 KCNB2Q92953 911 aa18.33■□□□□ 0.53
SCN8A-214ENST00000637709 SMC3Q9UQE7 1217 aa18.33■□□□□ 0.53
SCN8A-214ENST00000637709 PDE8AO60658 829 aa18.33■□□□□ 0.52
SCN8A-214ENST00000637709 SYT1P21579 422 aa18.33■□□□□ 0.52
SCN8A-214ENST00000637709 RNF20Q5VTR2 975 aa18.33■□□□□ 0.52
SCN8A-214ENST00000637709 GPR108Q9NPR9 543 aa18.33■□□□□ 0.52
SCN8A-214ENST00000637709 BCL9LQ86UU0 1499 aa18.33■□□□□ 0.52
SCN8A-214ENST00000637709 CDHR2Q9BYE9 1310 aa18.33■□□□□ 0.52
SCN8A-214ENST00000637709 COL4A1P02462 1669 aa18.32■□□□□ 0.52
SCN8A-214ENST00000637709 TOB2Q14106 344 aaPredicted RBP18.32■□□□□ 0.52
SCN8A-214ENST00000637709 CLEC17AQ6ZS10 378 aa18.32■□□□□ 0.52
SCN8A-214ENST00000637709 RPS6KB1P23443 525 aa18.32■□□□□ 0.52
SCN8A-214ENST00000637709 PHKA1P46020 1223 aa18.32■□□□□ 0.52
SCN8A-214ENST00000637709 BARGINQ6ZT62 677 aa18.32■□□□□ 0.52
SCN8A-214ENST00000637709 ERVV-1B6SEH8 477 aa18.31■□□□□ 0.52
SCN8A-214ENST00000637709 PUS7LQ9H0K6 701 aaKnown RBP18.31■□□□□ 0.52
SCN8A-214ENST00000637709 RNF113AO15541 343 aaKnown RBP18.31■□□□□ 0.52
SCN8A-214ENST00000637709 GADD45BO75293 160 aaPredicted RBP18.31■□□□□ 0.52
SCN8A-214ENST00000637709 HSPD1P10809 573 aaKnown RBP18.31■□□□□ 0.52
SCN8A-214ENST00000637709 C3orf67Q6ZVT6 689 aa18.31■□□□□ 0.52
SCN8A-214ENST00000637709 AMIGO3Q86WK7 504 aa18.31■□□□□ 0.52
SCN8A-214ENST00000637709 USP21Q9UK80 565 aa18.31■□□□□ 0.52
SCN8A-214ENST00000637709 AKAP2Q9Y2D5 859 aa18.31■□□□□ 0.52
SCN8A-214ENST00000637709 SH3TC1Q8TE82 1336 aa18.31■□□□□ 0.52
SCN8A-214ENST00000637709 LAMA4Q16363 1823 aa18.3■□□□□ 0.52
SCN8A-214ENST00000637709 VPS37CA5D8V6 355 aaPredicted RBP18.3■□□□□ 0.52
SCN8A-214ENST00000637709 ZMYM1Q5SVZ6 1142 aa18.3■□□□□ 0.52
SCN8A-214ENST00000637709 TM6SF1Q9BZW5 370 aa18.3■□□□□ 0.52
SCN8A-214ENST00000637709 IQSEC3Q9UPP2 1182 aaPredicted RBP18.3■□□□□ 0.52
SCN8A-214ENST00000637709 FSD2A1L4K1 749 aa18.3■□□□□ 0.52
SCN8A-214ENST00000637709 FOSBP53539 338 aa18.3■□□□□ 0.52
SCN8A-214ENST00000637709 Q6ZUG5 572 aa18.3■□□□□ 0.52
SCN8A-214ENST00000637709 FERMT3Q86UX7 667 aa18.3■□□□□ 0.52
SCN8A-214ENST00000637709 VGLL2Q8N8G2 317 aa18.3■□□□□ 0.52
SCN8A-214ENST00000637709 NEK1Q96PY6 1258 aa18.3■□□□□ 0.52
SCN8A-214ENST00000637709 UTP14AQ9BVJ6 771 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms