RNA–Protein interactions for RNA: ENST00000637628.1

CHRNA4-220, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-220ENST00000637628 MAPK8IP1Q9UQF2 711 aa4.28□□□□□ -1.72
CHRNA4-220ENST00000637628 DAAM1Q9Y4D1 1078 aa4.28□□□□□ -1.72
CHRNA4-220ENST00000637628 PTCH2Q9Y6C5 1203 aa4.28□□□□□ -1.72
CHRNA4-220ENST00000637628 RPGRIP1LQ68CZ1 1315 aa4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 KDM2BQ8NHM5 1336 aa4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 MINDY4BA8MYZ0 360 aa4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 ZBTB39O15060 712 aa4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 AKAP10O43572 662 aa4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 CPNE3O75131 537 aaKnown RBP4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 MYCP01106 439 aaPredicted RBP4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 PDGFAP04085 211 aa4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 NBPF7P0C2Y1 421 aaPredicted RBP4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 VDRP11473 427 aa4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 PCSK2P16519 638 aa4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 POU3F3P20264 500 aaPredicted RBP4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 CASP2P42575 452 aa4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 SOX9P48436 509 aa4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 HDGFP51858 240 aaKnown RBP4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 NEK2P51955 445 aa4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 PWP1Q13610 501 aa4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 COL9A2Q14055 689 aaPredicted RBP4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 PTPRNQ16849 979 aa4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 PI16Q6UXB8 463 aa4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 TNS4Q8IZW8 715 aa4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 SPICE1Q8N0Z3 855 aa4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 CPXCR1Q8N123 301 aa4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 SYNPOQ8N3V7 929 aa4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 UBR7Q8N806 425 aa4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 TTC16Q8NEE8 873 aa4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 OSBPL7Q9BZF2 842 aa4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 RSPH9Q9H1X1 276 aaPredicted RBP4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 DNAJC25Q9H1X3 360 aa4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 ACTR10Q9NZ32 417 aa4.27□□□□□ -1.73
CHRNA4-220ENST00000637628 KDM4FA0A1W2PPD8 638 aa4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 A6NJY4 79 aa4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 F6X3S4 739 aa4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 IRS4O14654 1257 aaPredicted RBP4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 BACH1O14867 736 aa4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 PPP1R12BO60237 982 aaPredicted RBP4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 KATNA1O75449 491 aa4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 TCEA3O75764 348 aa4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 VARSP26640 1264 aaKnown RBP4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 GBP2P32456 591 aaPredicted RBP4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 EIF4A3P38919 411 aaKnown RBP4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 GFOD2Q3B7J2 385 aa4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 C8orf34Q49A92 452 aa4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 TM4SF20Q53R12 229 aa4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 IER5LQ5T953 404 aa4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 USPL1Q5W0Q7 1092 aa4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 CC2D1AQ6P1N0 951 aaPredicted RBP4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 CCDC81Q6ZN84 652 aa4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 NIM1KQ8IY84 436 aa4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 ANKRD42Q8N9B4 389 aa4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 SECISBP2LQ93073 1101 aaKnown RBP4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 EAF1Q96JC9 268 aaPredicted RBP4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 USB1Q9BQ65 265 aaKnown RBP4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 CARD14Q9BXL6 1004 aa4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 TSPAN10Q9H1Z9 355 aaPredicted RBP4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 AASDHPPTQ9NRN7 309 aa4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 ATG3Q9NT62 314 aa4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 PFDN2Q9UHV9 154 aa4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 NOL7Q9UMY1 257 aaKnown RBP4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 GTF2A1LQ9UNN4 478 aa4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 CTDP1Q9Y5B0 961 aaPredicted RBP4.26□□□□□ -1.73
CHRNA4-220ENST00000637628 RASSF10A6NK89 507 aa4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 PDE8AO60658 829 aa4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 RNF40O75150 1001 aa4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 RNASEH2AO75792 299 aaKnown RBP4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 F2P00734 622 aa4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 PTPREP23469 700 aa4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 FXR2P51116 673 aaKnown RBP eCLIP4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 NEK3P51956 506 aa4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 TERF1P54274 439 aa4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 GEMIN4P57678 1058 aaKnown RBP4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 FAM193AP78312 1265 aa4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 APOBRQ0VD83 1088 aa4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 PICALMQ13492 652 aa4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 PIN1Q13526 163 aaPredicted RBP4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 SEPT6Q14141 434 aa4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 PUS10Q3MIT2 529 aaKnown RBP4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 KMT5BQ4FZB7 885 aa4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 PCNX4Q63HM2 1172 aa4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 LARP1BQ659C4 914 aaKnown RBP4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 IL31Q6EBC2 164 aa4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 ERAP2Q6P179 960 aa4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 C3orf67Q6ZVT6 689 aa4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 TCEAL8Q8IYN2 117 aa4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 ZNF296Q8WUU4 475 aaPredicted RBP4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 NINJ1Q92982 152 aa4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 MTMR8Q96EF0 704 aa4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 SCLT1Q96NL6 688 aa4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 RSRP1Q9BUV0 290 aa4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 ASPSCR1Q9BZE9 553 aa4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 ZNF69Q9UC07 566 aa4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 USP25Q9UHP3 1055 aa4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 PUF60Q9UHX1 559 aaKnown RBP4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 KCNG1Q9UIX4 513 aa4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 FBXO2Q9UK22 296 aaPredicted RBP4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 HDAC9Q9UKV0 1011 aa4.25□□□□□ -1.73
CHRNA4-220ENST00000637628 PDZRN3Q9UPQ7 1066 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms