RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 CDC25BP30305 580 aa23.69■■□□□ 1.38
CACNA1A-243ENST00000637616 APOBRQ0VD83 1088 aa23.69■■□□□ 1.38
CACNA1A-243ENST00000637616 DDX46Q7L014 1031 aaKnown RBP23.69■■□□□ 1.38
CACNA1A-243ENST00000637616 LINS1Q8NG48 757 aa23.69■■□□□ 1.38
CACNA1A-243ENST00000637616 MRFAP1L1Q96HT8 127 aa23.69■■□□□ 1.38
CACNA1A-243ENST00000637616 HMG20BQ9P0W2 317 aa23.69■■□□□ 1.38
CACNA1A-243ENST00000637616 ME1P48163 572 aa23.68■■□□□ 1.38
CACNA1A-243ENST00000637616 PIP4K2AP48426 406 aaPredicted RBP23.68■■□□□ 1.38
CACNA1A-243ENST00000637616 RBM6P78332 1123 aaKnown RBP23.68■■□□□ 1.38
CACNA1A-243ENST00000637616 IGKV5-2P06315 115 aa23.68■■□□□ 1.38
CACNA1A-243ENST00000637616 STOX1Q6ZVD7 989 aa23.68■■□□□ 1.38
CACNA1A-243ENST00000637616 DBNLQ9UJU6 430 aaKnown RBP23.68■■□□□ 1.38
CACNA1A-243ENST00000637616 LRRN4CLQ8ND94 238 aa23.68■■□□□ 1.38
CACNA1A-243ENST00000637616 FMNL2Q96PY5 1086 aa23.68■■□□□ 1.38
CACNA1A-243ENST00000637616 ALDH8A1Q9H2A2 487 aaPredicted RBP23.68■■□□□ 1.38
CACNA1A-243ENST00000637616 ZBTB22O15209 634 aa23.67■■□□□ 1.38
CACNA1A-243ENST00000637616 KINO60870 393 aaKnown RBP23.67■■□□□ 1.38
CACNA1A-243ENST00000637616 SARM1Q6SZW1 724 aa23.67■■□□□ 1.38
CACNA1A-243ENST00000637616 CCDC73Q6ZRK6 1079 aa23.67■■□□□ 1.38
CACNA1A-243ENST00000637616 RIC3Q7Z5B4 369 aa23.67■■□□□ 1.38
CACNA1A-243ENST00000637616 CCAR2Q8N163 923 aaKnown RBP23.67■■□□□ 1.38
CACNA1A-243ENST00000637616 FSIP1Q8NA03 581 aa23.67■■□□□ 1.38
CACNA1A-243ENST00000637616 ZSCAN16Q9H4T2 348 aaPredicted RBP23.67■■□□□ 1.38
CACNA1A-243ENST00000637616 CTDNEP1O95476 244 aa23.66■■□□□ 1.38
CACNA1A-243ENST00000637616 ZNF397Q8NF99 534 aaPredicted RBP23.66■■□□□ 1.38
CACNA1A-243ENST00000637616 TFCP2Q12800 502 aa23.66■■□□□ 1.38
CACNA1A-243ENST00000637616 EID1Q9Y6B2 187 aa23.66■■□□□ 1.38
CACNA1A-243ENST00000637616 PLEKHG1Q9ULL1 1385 aa23.66■■□□□ 1.38
CACNA1A-243ENST00000637616 RNMTO43148 476 aaKnown RBP23.65■■□□□ 1.38
CACNA1A-243ENST00000637616 TSGA10IPQ3SY00 556 aa23.65■■□□□ 1.38
CACNA1A-243ENST00000637616 PTPDC1A2A3K4 754 aa23.65■■□□□ 1.38
CACNA1A-243ENST00000637616 ERICH4A6NGS2 130 aa23.65■■□□□ 1.38
CACNA1A-243ENST00000637616 AKAP4Q5JQC9 854 aa23.65■■□□□ 1.38
CACNA1A-243ENST00000637616 NSUN7Q8NE18 718 aaKnown RBP23.65■■□□□ 1.38
CACNA1A-243ENST00000637616 TAOK2Q9UL54 1235 aa23.65■■□□□ 1.38
CACNA1A-243ENST00000637616 ADGRL3Q9HAR2 1447 aa23.65■■□□□ 1.38
CACNA1A-243ENST00000637616 A0A1B0GVL5 298 aa23.65■■□□□ 1.38
CACNA1A-243ENST00000637616 USPL1Q5W0Q7 1092 aa23.65■■□□□ 1.38
CACNA1A-243ENST00000637616 OTUD7BQ6GQQ9 843 aa23.65■■□□□ 1.38
CACNA1A-243ENST00000637616 KRT222Q8N1A0 295 aa23.65■■□□□ 1.38
CACNA1A-243ENST00000637616 IP6K1Q92551 441 aa23.65■■□□□ 1.38
CACNA1A-243ENST00000637616 RCOR1Q9UKL0 485 aa23.65■■□□□ 1.38
CACNA1A-243ENST00000637616 SLC39A6Q13433 755 aa23.64■■□□□ 1.38
CACNA1A-243ENST00000637616 KRT32Q14532 448 aa23.64■■□□□ 1.38
CACNA1A-243ENST00000637616 BIN1O00499 593 aa23.64■■□□□ 1.37
CACNA1A-243ENST00000637616 TERF2Q15554 542 aa23.64■■□□□ 1.37
CACNA1A-243ENST00000637616 ERBB3P21860 1342 aa23.64■■□□□ 1.37
CACNA1A-243ENST00000637616 GABPB1Q06547 395 aaPredicted RBP23.63■■□□□ 1.37
CACNA1A-243ENST00000637616 NBPF11Q86T75 865 aa23.63■■□□□ 1.37
CACNA1A-243ENST00000637616 DBNDD2Q9BQY9 259 aa23.63■■□□□ 1.37
CACNA1A-243ENST00000637616 SDF4Q9BRK5 362 aa23.63■■□□□ 1.37
CACNA1A-243ENST00000637616 CAVIN2O95810 425 aa23.63■■□□□ 1.37
CACNA1A-243ENST00000637616 ERCC6LQ2NKX8 1250 aa23.63■■□□□ 1.37
CACNA1A-243ENST00000637616 C1orf141Q5JVX7 400 aa23.63■■□□□ 1.37
CACNA1A-243ENST00000637616 ISM2Q6H9L7 571 aa23.63■■□□□ 1.37
CACNA1A-243ENST00000637616 MYD88Q99836 296 aa23.63■■□□□ 1.37
CACNA1A-243ENST00000637616 ANO10Q9NW15 660 aa23.63■■□□□ 1.37
CACNA1A-243ENST00000637616 ZNF609O15014 1411 aa23.62■■□□□ 1.37
CACNA1A-243ENST00000637616 ENGASEQ8NFI3 743 aa23.62■■□□□ 1.37
CACNA1A-243ENST00000637616 ZNF446Q9NWS9 450 aa23.62■■□□□ 1.37
CACNA1A-243ENST00000637616 SMC2O95347 1197 aa23.62■■□□□ 1.37
CACNA1A-243ENST00000637616 NEMFO60524 1076 aa23.61■■□□□ 1.37
CACNA1A-243ENST00000637616 KCNA6P17658 529 aa23.61■■□□□ 1.37
CACNA1A-243ENST00000637616 PLEKHO1Q53GL0 409 aaPredicted RBP23.61■■□□□ 1.37
CACNA1A-243ENST00000637616 GORABQ5T7V8 394 aa23.61■■□□□ 1.37
CACNA1A-243ENST00000637616 SYT10Q6XYQ8 523 aa23.61■■□□□ 1.37
CACNA1A-243ENST00000637616 ILDR1Q86SU0 546 aaPredicted RBP23.61■■□□□ 1.37
CACNA1A-243ENST00000637616 CEP57L1Q8IYX8 460 aa23.61■■□□□ 1.37
CACNA1A-243ENST00000637616 SMARCC2Q8TAQ2 1214 aa23.61■■□□□ 1.37
CACNA1A-243ENST00000637616 HDAC5Q9UQL6 1122 aa23.61■■□□□ 1.37
CACNA1A-243ENST00000637616 DIP2AQ14689 1571 aa23.61■■□□□ 1.37
CACNA1A-243ENST00000637616 SLU7O95391 586 aaKnown RBP23.61■■□□□ 1.37
CACNA1A-243ENST00000637616 FAM160A1Q05DH4 1040 aa23.61■■□□□ 1.37
CACNA1A-243ENST00000637616 DPCR1Q3MIW9 517 aa23.61■■□□□ 1.37
CACNA1A-243ENST00000637616 ERO1AQ96HE7 468 aa23.61■■□□□ 1.37
CACNA1A-243ENST00000637616 CHMP4AQ9BY43 222 aa23.61■■□□□ 1.37
CACNA1A-243ENST00000637616 E4F1Q66K89 784 aaPredicted RBP23.61■■□□□ 1.37
CACNA1A-243ENST00000637616 CTAGE5O15320 804 aa23.6■■□□□ 1.37
CACNA1A-243ENST00000637616 TNNI3KQ59H18 835 aa23.6■■□□□ 1.37
CACNA1A-243ENST00000637616 TMC6Q7Z403 805 aa23.6■■□□□ 1.37
CACNA1A-243ENST00000637616 PCDHA7Q9UN72 937 aa23.6■■□□□ 1.37
CACNA1A-243ENST00000637616 FPGT-TNNI3KV9GXZ4 949 aa23.6■■□□□ 1.37
CACNA1A-243ENST00000637616 CHD2O14647 1828 aaKnown RBP23.6■■□□□ 1.37
CACNA1A-243ENST00000637616 DDX58O95786 925 aaKnown RBP23.6■■□□□ 1.37
CACNA1A-243ENST00000637616 PDIA6Q15084 440 aa23.6■■□□□ 1.37
CACNA1A-243ENST00000637616 XPO4Q9C0E2 1151 aaKnown RBP23.6■■□□□ 1.37
CACNA1A-243ENST00000637616 IFNKQ9P0W0 207 aa23.6■■□□□ 1.37
CACNA1A-243ENST00000637616 PFKFB2O60825 505 aa23.59■■□□□ 1.37
CACNA1A-243ENST00000637616 PTPN21Q16825 1174 aa23.59■■□□□ 1.37
CACNA1A-243ENST00000637616 MCMDC2Q4G0Z9 681 aa23.59■■□□□ 1.37
CACNA1A-243ENST00000637616 U3KPZ7 1027 aaPredicted RBP23.59■■□□□ 1.37
CACNA1A-243ENST00000637616 UBR1Q8IWV7 1749 aa23.59■■□□□ 1.37
CACNA1A-243ENST00000637616 POLR3DP05423 398 aaPredicted RBP23.59■■□□□ 1.37
CACNA1A-243ENST00000637616 GPHNQ9NQX3 736 aaPredicted RBP23.59■■□□□ 1.37
CACNA1A-243ENST00000637616 ATP5JP18859 108 aa23.58■■□□□ 1.37
CACNA1A-243ENST00000637616 NDUFA8P51970 172 aa23.58■■□□□ 1.37
CACNA1A-243ENST00000637616 RAB11FIP4Q86YS3 637 aa23.58■■□□□ 1.37
CACNA1A-243ENST00000637616 NEURL1BA8MQ27 555 aa23.58■■□□□ 1.37
CACNA1A-243ENST00000637616 ARMCX5Q6P1M9 558 aa23.58■■□□□ 1.37
CACNA1A-243ENST00000637616 XAGE3Q8WTP9 111 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms