RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 FOXD4L5Q5VV16 416 aaPredicted RBP22.46■■□□□ 1.19
CLN5-219ENST00000637537 FOXD4L4Q8WXT5 416 aaPredicted RBP22.46■■□□□ 1.19
CLN5-219ENST00000637537 SNRKQ9NRH2 765 aa22.46■■□□□ 1.19
CLN5-219ENST00000637537 CAMTA2O94983 1202 aa22.45■■□□□ 1.18
CLN5-219ENST00000637537 IFIT1P09914 478 aaKnown RBP22.45■■□□□ 1.18
CLN5-219ENST00000637537 KBTBD3Q8NAB2 608 aa22.45■■□□□ 1.18
CLN5-219ENST00000637537 XAGE2Q96GT9 111 aa22.45■■□□□ 1.18
CLN5-219ENST00000637537 CUL4AQ13619 759 aa22.45■■□□□ 1.18
CLN5-219ENST00000637537 FNBP4Q8N3X1 1017 aaPredicted RBP22.45■■□□□ 1.18
CLN5-219ENST00000637537 ZDHHC9Q9Y397 364 aa22.45■■□□□ 1.18
CLN5-219ENST00000637537 ANKRD18BA2A2Z9 1011 aa22.44■■□□□ 1.18
CLN5-219ENST00000637537 PDE8AO60658 829 aa22.44■■□□□ 1.18
CLN5-219ENST00000637537 TAF5LO75529 589 aa22.44■■□□□ 1.18
CLN5-219ENST00000637537 FKBP4Q02790 459 aaKnown RBP eCLIP22.44■■□□□ 1.18
CLN5-219ENST00000637537 METTL24Q5JXM2 366 aa22.44■■□□□ 1.18
CLN5-219ENST00000637537 GORABQ5T7V8 394 aa22.44■■□□□ 1.18
CLN5-219ENST00000637537 RIPOR2Q9Y4F9 1068 aa22.44■■□□□ 1.18
CLN5-219ENST00000637537 SLC27A2O14975 620 aa22.43■■□□□ 1.18
CLN5-219ENST00000637537 DTNBO60941 627 aa22.43■■□□□ 1.18
CLN5-219ENST00000637537 CYP2E1P05181 493 aaPredicted RBP22.43■■□□□ 1.18
CLN5-219ENST00000637537 TPM2P07951 284 aa22.43■■□□□ 1.18
CLN5-219ENST00000637537 RUFY3Q7L099 469 aa22.43■■□□□ 1.18
CLN5-219ENST00000637537 CNNM1Q9NRU3 951 aa22.43■■□□□ 1.18
CLN5-219ENST00000637537 MYH3P11055 1940 aa22.43■■□□□ 1.18
CLN5-219ENST00000637537 ZKSCAN1P17029 563 aaPredicted RBP22.43■■□□□ 1.18
CLN5-219ENST00000637537 NUCB2P80303 420 aa22.43■■□□□ 1.18
CLN5-219ENST00000637537 LINC00116Q8NCU8 138 aa22.43■■□□□ 1.18
CLN5-219ENST00000637537 CHAMP1Q96JM3 812 aa22.43■■□□□ 1.18
CLN5-219ENST00000637537 SMARCC1Q92922 1105 aaPredicted RBP22.42■■□□□ 1.18
CLN5-219ENST00000637537 SCARF1Q14162 830 aa22.42■■□□□ 1.18
CLN5-219ENST00000637537 PI16Q6UXB8 463 aa22.42■■□□□ 1.18
CLN5-219ENST00000637537 KCNB2Q92953 911 aa22.42■■□□□ 1.18
CLN5-219ENST00000637537 NIP7Q9Y221 180 aaKnown RBP eCLIP22.42■■□□□ 1.18
CLN5-219ENST00000637537 RIC1Q4ADV7 1423 aa22.42■■□□□ 1.18
CLN5-219ENST00000637537 BAG4O95429 457 aaKnown RBP22.41■■□□□ 1.18
CLN5-219ENST00000637537 TCEANC2Q96MN5 208 aa22.41■■□□□ 1.18
CLN5-219ENST00000637537 AKAP2Q9Y2D5 859 aa22.41■■□□□ 1.18
CLN5-219ENST00000637537 FBXO3Q9UK99 471 aa22.41■■□□□ 1.18
CLN5-219ENST00000637537 MCMDC2Q4G0Z9 681 aa22.4■■□□□ 1.18
CLN5-219ENST00000637537 CCDC158Q5M9N0 1113 aa22.4■■□□□ 1.18
CLN5-219ENST00000637537 TTC39AQ5SRH9 613 aa22.4■■□□□ 1.18
CLN5-219ENST00000637537 ZSWIM6Q9HCJ5 1215 aa22.4■■□□□ 1.18
CLN5-219ENST00000637537 SH3TC1Q8TE82 1336 aa22.4■■□□□ 1.18
CLN5-219ENST00000637537 LARGE1O95461 756 aa22.4■■□□□ 1.18
CLN5-219ENST00000637537 HELBQ8NG08 1087 aaPredicted RBP22.4■■□□□ 1.18
CLN5-219ENST00000637537 PDRG1Q9NUG6 133 aa22.4■■□□□ 1.18
CLN5-219ENST00000637537 ATP2B3Q16720 1220 aa22.39■■□□□ 1.18
CLN5-219ENST00000637537 UTP14AQ9BVJ6 771 aaKnown RBP22.39■■□□□ 1.18
CLN5-219ENST00000637537 CYP46A1Q9Y6A2 500 aa22.39■■□□□ 1.18
CLN5-219ENST00000637537 SEC31BQ9NQW1 1179 aa22.39■■□□□ 1.17
CLN5-219ENST00000637537 INTS4Q96HW7 963 aaKnown RBP22.38■■□□□ 1.17
CLN5-219ENST00000637537 LIMCH1Q9UPQ0 1083 aa22.38■■□□□ 1.17
CLN5-219ENST00000637537 VPS53Q5VIR6 699 aa22.38■■□□□ 1.17
CLN5-219ENST00000637537 MCTP1Q6DN14 999 aa22.37■■□□□ 1.17
CLN5-219ENST00000637537 TRIM44Q96DX7 344 aaPredicted RBP22.37■■□□□ 1.17
CLN5-219ENST00000637537 SNAP23O00161 211 aa22.37■■□□□ 1.17
CLN5-219ENST00000637537 VGLL2Q8N8G2 317 aa22.37■■□□□ 1.17
CLN5-219ENST00000637537 TM6SF1Q9BZW5 370 aa22.37■■□□□ 1.17
CLN5-219ENST00000637537 PDCL3Q9H2J4 239 aa22.37■■□□□ 1.17
CLN5-219ENST00000637537 ZAP70P43403 619 aa22.36■■□□□ 1.17
CLN5-219ENST00000637537 MEX3CQ5U5Q3 659 aaKnown RBP22.36■■□□□ 1.17
CLN5-219ENST00000637537 RNF20Q5VTR2 975 aa22.36■■□□□ 1.17
CLN5-219ENST00000637537 GAS2L3Q86XJ1 694 aa22.36■■□□□ 1.17
CLN5-219ENST00000637537 RFX7Q2KHR2 1363 aa22.36■■□□□ 1.17
CLN5-219ENST00000637537 RPAP1Q9BWH6 1393 aaPredicted RBP22.36■■□□□ 1.17
CLN5-219ENST00000637537 SPATA31A6Q5VVP1 1343 aa22.36■■□□□ 1.17
CLN5-219ENST00000637537 RREB1Q92766 1687 aa22.35■■□□□ 1.17
CLN5-219ENST00000637537 CLEC17AQ6ZS10 378 aa22.35■■□□□ 1.17
CLN5-219ENST00000637537 PDE8BO95263 885 aa22.35■■□□□ 1.17
CLN5-219ENST00000637537 NTSR2O95665 410 aa22.35■■□□□ 1.17
CLN5-219ENST00000637537 BICDL1Q6ZP65 573 aa22.35■■□□□ 1.17
CLN5-219ENST00000637537 COL5A3P25940 1745 aaPredicted RBP22.35■■□□□ 1.17
CLN5-219ENST00000637537 HSPA1LP34931 641 aa22.34■■□□□ 1.17
CLN5-219ENST00000637537 USPL1Q5W0Q7 1092 aa22.34■■□□□ 1.17
CLN5-219ENST00000637537 ZMYM1Q5SVZ6 1142 aa22.34■■□□□ 1.17
CLN5-219ENST00000637537 RNF113AO15541 343 aaKnown RBP22.33■■□□□ 1.17
CLN5-219ENST00000637537 CYP21A2P08686 494 aa22.33■■□□□ 1.17
CLN5-219ENST00000637537 MCAMP43121 646 aa22.33■■□□□ 1.17
CLN5-219ENST00000637537 PARP10Q53GL7 1025 aa22.33■■□□□ 1.17
CLN5-219ENST00000637537 CCDC83Q8IWF9 413 aa22.33■■□□□ 1.17
CLN5-219ENST00000637537 MAST3O60307 1309 aa22.33■■□□□ 1.17
CLN5-219ENST00000637537 A0A0G2JLW4 131 aa22.33■■□□□ 1.17
CLN5-219ENST00000637537 FOXD4L6Q3SYB3 417 aaPredicted RBP22.33■■□□□ 1.17
CLN5-219ENST00000637537 BLOC1S2Q6QNY1 142 aa22.33■■□□□ 1.17
CLN5-219ENST00000637537 FOXD4L3Q6VB84 417 aaPredicted RBP22.33■■□□□ 1.17
CLN5-219ENST00000637537 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.33■■□□□ 1.17
CLN5-219ENST00000637537 M0R2C6 588 aa22.32■■□□□ 1.16
CLN5-219ENST00000637537 PSMA5P28066 241 aa22.32■■□□□ 1.16
CLN5-219ENST00000637537 ME3Q16798 604 aa22.32■■□□□ 1.16
CLN5-219ENST00000637537 CERKQ8TCT0 537 aa22.32■■□□□ 1.16
CLN5-219ENST00000637537 OSBP2Q969R2 916 aa22.32■■□□□ 1.16
CLN5-219ENST00000637537 HELLSQ9NRZ9 838 aa22.32■■□□□ 1.16
CLN5-219ENST00000637537 TPCN1Q9ULQ1 816 aa22.32■■□□□ 1.16
CLN5-219ENST00000637537 GOLGA6L22H0YM25 854 aa22.32■■□□□ 1.16
CLN5-219ENST00000637537 NECAB1Q8N987 351 aa22.32■■□□□ 1.16
CLN5-219ENST00000637537 BRD1O95696 1058 aa22.31■■□□□ 1.16
CLN5-219ENST00000637537 SKOR2Q2VWA4 1001 aaPredicted RBP22.31■■□□□ 1.16
CLN5-219ENST00000637537 GJD4Q96KN9 370 aaPredicted RBP22.31■■□□□ 1.16
CLN5-219ENST00000637537 MPHOSPH8Q99549 860 aa22.31■■□□□ 1.16
CLN5-219ENST00000637537 HMG20BQ9P0W2 317 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms