RNA–Protein interactions for RNA: ENST00000637106.1

VGLL3-204, Transcript of vestigial like family member 3, humanhuman

TSL 5

Gene VGLL3, Length 1,240 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3-204ENST00000637106 TOMM22Q9NS69 142 aa12.08□□□□□ -0.48
VGLL3-204ENST00000637106 NOB1Q9ULX3 412 aaKnown RBP12.08□□□□□ -0.48
VGLL3-204ENST00000637106 TRPM3Q9HCF6 1732 aaPredicted RBP12.08□□□□□ -0.48
VGLL3-204ENST00000637106 ATXN2Q99700 1313 aaKnown RBP12.08□□□□□ -0.48
VGLL3-204ENST00000637106 ALS2Q96Q42 1657 aa12.07□□□□□ -0.48
VGLL3-204ENST00000637106 H0YHG0 523 aa12.07□□□□□ -0.48
VGLL3-204ENST00000637106 POLR3GO15318 223 aaPredicted RBP12.07□□□□□ -0.48
VGLL3-204ENST00000637106 PPFIA4O75335 1185 aa12.07□□□□□ -0.48
VGLL3-204ENST00000637106 SKILP12757 684 aa12.07□□□□□ -0.48
VGLL3-204ENST00000637106 GSPT1P15170 499 aaKnown RBP12.07□□□□□ -0.48
VGLL3-204ENST00000637106 LMAN1P49257 510 aa12.07□□□□□ -0.48
VGLL3-204ENST00000637106 NEK4P51957 841 aa12.07□□□□□ -0.48
VGLL3-204ENST00000637106 SARNPP82979 210 aaKnown RBP12.07□□□□□ -0.48
VGLL3-204ENST00000637106 TUBB2AQ13885 445 aa12.07□□□□□ -0.48
VGLL3-204ENST00000637106 ITSN1Q15811 1721 aa12.07□□□□□ -0.48
VGLL3-204ENST00000637106 LRRFIP1Q32MZ4 808 aaKnown RBP12.07□□□□□ -0.48
VGLL3-204ENST00000637106 DNAJC21Q5F1R6 531 aaKnown RBP12.07□□□□□ -0.48
VGLL3-204ENST00000637106 GIMAP7Q8NHV1 300 aa12.07□□□□□ -0.48
VGLL3-204ENST00000637106 ITFG2Q969R8 447 aa12.07□□□□□ -0.48
VGLL3-204ENST00000637106 TUBB2BQ9BVA1 445 aa12.07□□□□□ -0.48
VGLL3-204ENST00000637106 OSBPL3Q9H4L5 887 aa12.07□□□□□ -0.48
VGLL3-204ENST00000637106 DCTPP1Q9H773 170 aa12.07□□□□□ -0.48
VGLL3-204ENST00000637106 TTC21BQ7Z4L5 1316 aa12.07□□□□□ -0.48
VGLL3-204ENST00000637106 CCDC151A5D8V7 595 aa12.06□□□□□ -0.48
VGLL3-204ENST00000637106 GOLGA6L9A6NEM1 432 aa12.06□□□□□ -0.48
VGLL3-204ENST00000637106 DDR1Q08345 913 aa12.06□□□□□ -0.48
VGLL3-204ENST00000637106 SAFB2Q14151 953 aaKnown RBP eCLIP12.06□□□□□ -0.48
VGLL3-204ENST00000637106 NEDD9Q14511 834 aa12.06□□□□□ -0.48
VGLL3-204ENST00000637106 ERCC6LQ2NKX8 1250 aa12.06□□□□□ -0.48
VGLL3-204ENST00000637106 CC2D1AQ6P1N0 951 aaPredicted RBP12.06□□□□□ -0.48
VGLL3-204ENST00000637106 LMOD2Q6P5Q4 547 aa12.06□□□□□ -0.48
VGLL3-204ENST00000637106 FCHSD1Q86WN1 690 aa12.06□□□□□ -0.48
VGLL3-204ENST00000637106 SEPT12Q8IYM1 358 aa12.06□□□□□ -0.48
VGLL3-204ENST00000637106 MPNDQ8N594 471 aa12.06□□□□□ -0.48
VGLL3-204ENST00000637106 BCL2L13Q9BXK5 485 aa12.06□□□□□ -0.48
VGLL3-204ENST00000637106 SRCIN1Q9C0H9 1055 aa12.06□□□□□ -0.48
VGLL3-204ENST00000637106 GBP3Q9H0R5 595 aa12.06□□□□□ -0.48
VGLL3-204ENST00000637106 OSBPL5Q9H0X9 879 aaPredicted RBP12.06□□□□□ -0.48
VGLL3-204ENST00000637106 TRAK1Q9UPV9 953 aa12.06□□□□□ -0.48
VGLL3-204ENST00000637106 MRVI1Q9Y6F6 885 aa12.06□□□□□ -0.48
VGLL3-204ENST00000637106 TULP4Q9NRJ4 1543 aa12.06□□□□□ -0.48
VGLL3-204ENST00000637106 COL14A1Q05707 1796 aaKnown RBP12.05□□□□□ -0.48
VGLL3-204ENST00000637106 A6NNZ2 444 aa12.05□□□□□ -0.48
VGLL3-204ENST00000637106 TULP1O00294 542 aaPredicted RBP12.05□□□□□ -0.48
VGLL3-204ENST00000637106 CTAGE5O15320 804 aa12.05□□□□□ -0.48
VGLL3-204ENST00000637106 SRGAP3O43295 1099 aa12.05□□□□□ -0.48
VGLL3-204ENST00000637106 ERLIN1O75477 346 aa12.05□□□□□ -0.48
VGLL3-204ENST00000637106 TBC1D8O95759 1140 aa12.05□□□□□ -0.48
VGLL3-204ENST00000637106 F13A1P00488 732 aa12.05□□□□□ -0.48
VGLL3-204ENST00000637106 ST5P78524 1137 aa12.05□□□□□ -0.48
VGLL3-204ENST00000637106 TUBB8Q3ZCM7 444 aa12.05□□□□□ -0.48
VGLL3-204ENST00000637106 GIMAP6Q6P9H5 292 aa12.05□□□□□ -0.48
VGLL3-204ENST00000637106 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.05□□□□□ -0.48
VGLL3-204ENST00000637106 SPATS2Q86XZ4 545 aaKnown RBP12.05□□□□□ -0.48
VGLL3-204ENST00000637106 CABLES1Q8TDN4 633 aa12.05□□□□□ -0.48
VGLL3-204ENST00000637106 RABGGTAQ92696 567 aa12.05□□□□□ -0.48
VGLL3-204ENST00000637106 CBX8Q9HC52 389 aa12.05□□□□□ -0.48
VGLL3-204ENST00000637106 NRAPQ86VF7 1730 aa12.05□□□□□ -0.48
VGLL3-204ENST00000637106 ANKRD33BA6NCL7 494 aa12.04□□□□□ -0.48
VGLL3-204ENST00000637106 FAM83GA6ND36 823 aa12.04□□□□□ -0.48
VGLL3-204ENST00000637106 GOLGA6L19H0YKK7 550 aa12.04□□□□□ -0.48
VGLL3-204ENST00000637106 WASLO00401 505 aaPredicted RBP12.04□□□□□ -0.48
VGLL3-204ENST00000637106 MAP2K7O14733 419 aa12.04□□□□□ -0.48
VGLL3-204ENST00000637106 STX6O43752 255 aa12.04□□□□□ -0.48
VGLL3-204ENST00000637106 TADA3O75528 432 aa12.04□□□□□ -0.48
VGLL3-204ENST00000637106 ICA1Q05084 483 aa12.04□□□□□ -0.48
VGLL3-204ENST00000637106 EXOSC9Q06265 439 aaKnown RBP12.04□□□□□ -0.48
VGLL3-204ENST00000637106 LRMPQ12912 555 aa12.04□□□□□ -0.48
VGLL3-204ENST00000637106 CRYMQ14894 314 aa12.04□□□□□ -0.48
VGLL3-204ENST00000637106 CCDC30Q5VVM6 783 aa12.04□□□□□ -0.48
VGLL3-204ENST00000637106 KRT27Q7Z3Y8 459 aa12.04□□□□□ -0.48
VGLL3-204ENST00000637106 RPAP2Q8IXW5 612 aaPredicted RBP12.04□□□□□ -0.48
VGLL3-204ENST00000637106 RNF217Q8TC41 542 aa12.04□□□□□ -0.48
VGLL3-204ENST00000637106 FAM71BQ8TC56 605 aa12.04□□□□□ -0.48
VGLL3-204ENST00000637106 PSMD1Q99460 953 aa12.04□□□□□ -0.48
VGLL3-204ENST00000637106 MPHOSPH8Q99549 860 aa12.04□□□□□ -0.48
VGLL3-204ENST00000637106 PAIP2Q9BPZ3 127 aaKnown RBP12.04□□□□□ -0.48
VGLL3-204ENST00000637106 GNL3LQ9NVN8 582 aaKnown RBP12.04□□□□□ -0.48
VGLL3-204ENST00000637106 ETF1P62495 437 aaKnown RBP12.03□□□□□ -0.48
VGLL3-204ENST00000637106 CCZ1BP86790 482 aa12.03□□□□□ -0.48
VGLL3-204ENST00000637106 CCZ1P86791 482 aaPredicted RBP12.03□□□□□ -0.48
VGLL3-204ENST00000637106 MICALL1Q8N3F8 863 aa12.03□□□□□ -0.48
VGLL3-204ENST00000637106 ERCC4Q92889 916 aaPredicted RBP12.03□□□□□ -0.48
VGLL3-204ENST00000637106 SGSM3Q96HU1 749 aa12.03□□□□□ -0.48
VGLL3-204ENST00000637106 API5Q9BZZ5 524 aaKnown RBP12.03□□□□□ -0.48
VGLL3-204ENST00000637106 ARHGEF28Q8N1W1 1705 aaKnown RBP12.03□□□□□ -0.48
VGLL3-204ENST00000637106 SMARCA5O60264 1052 aaPredicted RBP12.02□□□□□ -0.49
VGLL3-204ENST00000637106 ERLIN2O94905 339 aa12.02□□□□□ -0.49
VGLL3-204ENST00000637106 MNAT1P51948 309 aa12.02□□□□□ -0.49
VGLL3-204ENST00000637106 MAP9Q49MG5 647 aa12.02□□□□□ -0.49
VGLL3-204ENST00000637106 GBP6Q6ZN66 633 aa12.02□□□□□ -0.49
VGLL3-204ENST00000637106 HDXQ7Z353 690 aa12.02□□□□□ -0.49
VGLL3-204ENST00000637106 OTUD6BQ8N6M0 293 aa12.02□□□□□ -0.49
VGLL3-204ENST00000637106 ZSCAN31Q96LW9 406 aaPredicted RBP12.02□□□□□ -0.49
VGLL3-204ENST00000637106 PUS7Q96PZ0 661 aaKnown RBP12.02□□□□□ -0.49
VGLL3-204ENST00000637106 SCAND2PQ9GZW5 306 aaPredicted RBP12.02□□□□□ -0.49
VGLL3-204ENST00000637106 TNMDQ9H2S6 317 aa12.02□□□□□ -0.49
VGLL3-204ENST00000637106 CLSTN2Q9H4D0 955 aa12.02□□□□□ -0.49
VGLL3-204ENST00000637106 CNPY2Q9Y2B0 182 aa12.02□□□□□ -0.49
VGLL3-204ENST00000637106 ABCC4O15439 1325 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms