RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 TMEM57Q8N5G2 664 aa10.27□□□□□ -0.77
PNKP-226ENST00000636840 ZNF526Q8TF50 670 aaPredicted RBP10.27□□□□□ -0.77
PNKP-226ENST00000636840 TNRC6CQ9HCJ0 1690 aaKnown RBP10.27□□□□□ -0.77
PNKP-226ENST00000636840 COL11A2P13942 1736 aaPredicted RBP10.27□□□□□ -0.77
PNKP-226ENST00000636840 UFL1O94874 794 aa10.26□□□□□ -0.77
PNKP-226ENST00000636840 KIAA2012Q0VF49 1180 aa10.26□□□□□ -0.77
PNKP-226ENST00000636840 TNIP1Q15025 636 aa10.26□□□□□ -0.77
PNKP-226ENST00000636840 C16orf71Q8IYS4 520 aaPredicted RBP10.26□□□□□ -0.77
PNKP-226ENST00000636840 TBC1D16Q8TBP0 767 aa10.26□□□□□ -0.77
PNKP-226ENST00000636840 ZNRF3Q9ULT6 936 aa10.26□□□□□ -0.77
PNKP-226ENST00000636840 CACNA1SQ13698 1873 aa10.25□□□□□ -0.77
PNKP-226ENST00000636840 DDX60Q8IY21 1712 aaKnown RBP10.25□□□□□ -0.77
PNKP-226ENST00000636840 FZD9O00144 591 aa10.25□□□□□ -0.77
PNKP-226ENST00000636840 RIMBP2O15034 1052 aa10.25□□□□□ -0.77
PNKP-226ENST00000636840 PLIN1O60240 522 aa10.25□□□□□ -0.77
PNKP-226ENST00000636840 VEGFAP15692 232 aaPredicted RBP10.25□□□□□ -0.77
PNKP-226ENST00000636840 CHRNDQ07001 517 aa10.25□□□□□ -0.77
PNKP-226ENST00000636840 PDE3AQ14432 1141 aa10.25□□□□□ -0.77
PNKP-226ENST00000636840 AOC3Q16853 763 aa10.25□□□□□ -0.77
PNKP-226ENST00000636840 KAZALD1Q96I82 304 aa10.25□□□□□ -0.77
PNKP-226ENST00000636840 MEIS3Q99687 375 aa10.25□□□□□ -0.77
PNKP-226ENST00000636840 POLLQ9UGP5 575 aa10.25□□□□□ -0.77
PNKP-226ENST00000636840 FBXO3Q9UK99 471 aa10.25□□□□□ -0.77
PNKP-226ENST00000636840 LRRFIP2Q9Y608 721 aaKnown RBP10.25□□□□□ -0.77
PNKP-226ENST00000636840 FER1L6Q2WGJ9 1857 aa10.24□□□□□ -0.77
PNKP-226ENST00000636840 PRELPP51888 382 aa10.24□□□□□ -0.77
PNKP-226ENST00000636840 ANKRD44Q8N8A2 993 aa10.24□□□□□ -0.77
PNKP-226ENST00000636840 ZNF594Q96JF6 807 aaPredicted RBP10.24□□□□□ -0.77
PNKP-226ENST00000636840 RRAGCQ9HB90 399 aa10.24□□□□□ -0.77
PNKP-226ENST00000636840 DDX19BQ9UMR2 479 aa10.24□□□□□ -0.77
PNKP-226ENST00000636840 GJA3Q9Y6H8 435 aa10.24□□□□□ -0.77
PNKP-226ENST00000636840 MYH3P11055 1940 aa10.24□□□□□ -0.77
PNKP-226ENST00000636840 MROH5Q6ZUA9 1318 aa10.24□□□□□ -0.77
PNKP-226ENST00000636840 UTRNP46939 3433 aa10.24□□□□□ -0.77
PNKP-226ENST00000636840 LAMB2P55268 1798 aa10.24□□□□□ -0.77
PNKP-226ENST00000636840 SBF1O95248 1867 aa10.23□□□□□ -0.77
PNKP-226ENST00000636840 IQCA1LA6NCM1 817 aa10.23□□□□□ -0.77
PNKP-226ENST00000636840 ZBTB7BO15156 539 aaPredicted RBP10.23□□□□□ -0.77
PNKP-226ENST00000636840 DDNO94850 711 aaPredicted RBP10.23□□□□□ -0.77
PNKP-226ENST00000636840 LMOD1P29536 600 aaPredicted RBP10.23□□□□□ -0.77
PNKP-226ENST00000636840 UBE4AQ14139 1066 aa10.23□□□□□ -0.77
PNKP-226ENST00000636840 METTL24Q5JXM2 366 aa10.23□□□□□ -0.77
PNKP-226ENST00000636840 CIAPIN1Q6FI81 312 aa10.23□□□□□ -0.77
PNKP-226ENST00000636840 PODNQ7Z5L7 613 aa10.23□□□□□ -0.77
PNKP-226ENST00000636840 GPC2Q8N158 579 aa10.23□□□□□ -0.77
PNKP-226ENST00000636840 PANK1Q8TE04 598 aa10.23□□□□□ -0.77
PNKP-226ENST00000636840 CEP126Q9P2H0 1117 aa10.23□□□□□ -0.77
PNKP-226ENST00000636840 TNNQ9UQP3 1299 aa10.23□□□□□ -0.77
PNKP-226ENST00000636840 ZNF804BA4D1E1 1349 aa10.23□□□□□ -0.77
PNKP-226ENST00000636840 TAF1P21675 1872 aa10.22□□□□□ -0.77
PNKP-226ENST00000636840 CCDC88AQ3V6T2 1871 aa10.22□□□□□ -0.77
PNKP-226ENST00000636840 EYA2O00167 538 aa10.22□□□□□ -0.77
PNKP-226ENST00000636840 SRGAP3O43295 1099 aa10.22□□□□□ -0.77
PNKP-226ENST00000636840 G3BP1Q13283 466 aaKnown RBP eCLIP10.22□□□□□ -0.77
PNKP-226ENST00000636840 MVPQ14764 893 aaKnown RBP10.22□□□□□ -0.77
PNKP-226ENST00000636840 DOK7Q18PE1 504 aa10.22□□□□□ -0.77
PNKP-226ENST00000636840 HELBQ8NG08 1087 aaPredicted RBP10.22□□□□□ -0.77
PNKP-226ENST00000636840 COA1Q9GZY4 146 aa10.22□□□□□ -0.77
PNKP-226ENST00000636840 RIPOR2Q9Y4F9 1068 aa10.22□□□□□ -0.77
PNKP-226ENST00000636840 ECE2O60344 883 aa10.21□□□□□ -0.77
PNKP-226ENST00000636840 TAF5LO75529 589 aa10.21□□□□□ -0.77
PNKP-226ENST00000636840 RLBP1P12271 317 aa10.21□□□□□ -0.77
PNKP-226ENST00000636840 IL15P40933 162 aaPredicted RBP10.21□□□□□ -0.77
PNKP-226ENST00000636840 ATP8B2P98198 1209 aa10.21□□□□□ -0.77
PNKP-226ENST00000636840 PTPN12Q05209 780 aaKnown RBP10.21□□□□□ -0.77
PNKP-226ENST00000636840 CXCL9Q07325 125 aa10.21□□□□□ -0.77
PNKP-226ENST00000636840 MTX1Q13505 466 aa10.21□□□□□ -0.77
PNKP-226ENST00000636840 CAVIN4Q5BKX8 364 aa10.21□□□□□ -0.77
PNKP-226ENST00000636840 ZNF804AQ7Z570 1209 aa10.21□□□□□ -0.77
PNKP-226ENST00000636840 VPS37DQ86XT2 251 aa10.21□□□□□ -0.77
PNKP-226ENST00000636840 PUS3Q9BZE2 481 aaKnown RBP10.21□□□□□ -0.77
PNKP-226ENST00000636840 DBNDD1Q9H9R9 158 aa10.21□□□□□ -0.77
PNKP-226ENST00000636840 COG6Q9Y2V7 657 aa10.21□□□□□ -0.77
PNKP-226ENST00000636840 H7C1D1 291 aa10.2□□□□□ -0.78
PNKP-226ENST00000636840 RAD17O75943 681 aa10.2□□□□□ -0.78
PNKP-226ENST00000636840 CIAO1O76071 339 aa10.2□□□□□ -0.78
PNKP-226ENST00000636840 PDE8BO95263 885 aa10.2□□□□□ -0.78
PNKP-226ENST00000636840 IFIT1P09914 478 aaKnown RBP10.2□□□□□ -0.78
PNKP-226ENST00000636840 C15orf52Q6ZUT6 534 aaKnown RBP10.2□□□□□ -0.78
PNKP-226ENST00000636840 PNMA8AQ86V59 439 aaPredicted RBP10.2□□□□□ -0.78
PNKP-226ENST00000636840 SNED1Q8TER0 1413 aa10.2□□□□□ -0.78
PNKP-226ENST00000636840 L3MBTL3Q96JM7 780 aaPredicted RBP10.2□□□□□ -0.78
PNKP-226ENST00000636840 SIL1Q9H173 461 aa10.2□□□□□ -0.78
PNKP-226ENST00000636840 NMRK2Q9NPI5 230 aa10.2□□□□□ -0.78
PNKP-226ENST00000636840 COPRSQ9NQ92 184 aa10.2□□□□□ -0.78
PNKP-226ENST00000636840 HACL1Q9UJ83 578 aa10.2□□□□□ -0.78
PNKP-226ENST00000636840 DICER1Q9UPY3 1922 aaKnown RBP10.2□□□□□ -0.78
PNKP-226ENST00000636840 AKAP2Q9Y2D5 859 aa10.2□□□□□ -0.78
PNKP-226ENST00000636840 MED23Q9ULK4 1368 aa10.19□□□□□ -0.78
PNKP-226ENST00000636840 USP17L3A6NCW0 530 aa10.19□□□□□ -0.78
PNKP-226ENST00000636840 USP17L4A6NCW7 530 aa10.19□□□□□ -0.78
PNKP-226ENST00000636840 HMMRO75330 724 aa10.19□□□□□ -0.78
PNKP-226ENST00000636840 FRAT2O75474 233 aaPredicted RBP10.19□□□□□ -0.78
PNKP-226ENST00000636840 TOMM70O94826 608 aa10.19□□□□□ -0.78
PNKP-226ENST00000636840 SLC5A1P13866 664 aa10.19□□□□□ -0.78
PNKP-226ENST00000636840 RPS12P25398 132 aaKnown RBP10.19□□□□□ -0.78
PNKP-226ENST00000636840 HIBADHP31937 336 aaKnown RBP10.19□□□□□ -0.78
PNKP-226ENST00000636840 RFX5P48382 616 aaPredicted RBP10.19□□□□□ -0.78
PNKP-226ENST00000636840 OS9Q13438 667 aaPredicted RBP10.19□□□□□ -0.78
PNKP-226ENST00000636840 LRRC24Q50LG9 513 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms