RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 RTN1Q16799 776 aa7.62□□□□□ -1.19
CLN5-212ENST00000636602 RNF43Q68DV7 783 aa7.62□□□□□ -1.19
CLN5-212ENST00000636602 GDF6Q6KF10 455 aaPredicted RBP7.62□□□□□ -1.19
CLN5-212ENST00000636602 DBNDD2Q9BQY9 259 aa7.62□□□□□ -1.19
CLN5-212ENST00000636602 C7orf69Q9H7B7 122 aa7.62□□□□□ -1.19
CLN5-212ENST00000636602 C11orf16Q9NQ32 467 aa7.62□□□□□ -1.19
CLN5-212ENST00000636602 C8AP07357 584 aa7.61□□□□□ -1.19
CLN5-212ENST00000636602 SRPK2P78362 688 aaKnown RBP7.61□□□□□ -1.19
CLN5-212ENST00000636602 LCE4AQ5TA78 99 aa7.61□□□□□ -1.19
CLN5-212ENST00000636602 TRIM42Q8IWZ5 723 aa7.61□□□□□ -1.19
CLN5-212ENST00000636602 PLD4Q96BZ4 506 aa7.61□□□□□ -1.19
CLN5-212ENST00000636602 IDH3AP50213 366 aa7.6□□□□□ -1.19
CLN5-212ENST00000636602 NPM2Q86SE8 214 aaKnown RBP7.6□□□□□ -1.19
CLN5-212ENST00000636602 LARGE2Q8N3Y3 721 aa7.6□□□□□ -1.19
CLN5-212ENST00000636602 GAS2L2Q8NHY3 880 aa7.6□□□□□ -1.19
CLN5-212ENST00000636602 CEP41Q9BYV8 373 aa7.6□□□□□ -1.19
CLN5-212ENST00000636602 USTQ9Y2C2 406 aa7.6□□□□□ -1.19
CLN5-212ENST00000636602 MAFBQ9Y5Q3 323 aaPredicted RBP7.6□□□□□ -1.19
CLN5-212ENST00000636602 HMX2A2RU54 273 aa7.59□□□□□ -1.19
CLN5-212ENST00000636602 UVSSAQ2YD98 709 aa7.59□□□□□ -1.19
CLN5-212ENST00000636602 CDCA8Q53HL2 280 aa7.59□□□□□ -1.19
CLN5-212ENST00000636602 PLEKHM2Q8IWE5 1019 aa7.59□□□□□ -1.19
CLN5-212ENST00000636602 ABI1Q8IZP0 508 aa7.59□□□□□ -1.19
CLN5-212ENST00000636602 POU5F2Q8N7G0 328 aa7.59□□□□□ -1.19
CLN5-212ENST00000636602 CHMP7Q8WUX9 453 aaPredicted RBP7.59□□□□□ -1.19
CLN5-212ENST00000636602 SCG3Q8WXD2 468 aaKnown RBP7.59□□□□□ -1.19
CLN5-212ENST00000636602 UTP4Q969X6 686 aaKnown RBP7.59□□□□□ -1.19
CLN5-212ENST00000636602 LOC102724428A0A0B4J2F2 783 aa7.58□□□□□ -1.2
CLN5-212ENST00000636602 J3QW42 95 aa7.58□□□□□ -1.2
CLN5-212ENST00000636602 ATP9BO43861 1147 aa7.58□□□□□ -1.2
CLN5-212ENST00000636602 SIK1P57059 783 aa7.58□□□□□ -1.2
CLN5-212ENST00000636602 OGFOD1Q8N543 542 aa7.58□□□□□ -1.2
CLN5-212ENST00000636602 KRTAP4-11Q9BYQ6 195 aa7.58□□□□□ -1.2
CLN5-212ENST00000636602 GZF1Q9H116 711 aaPredicted RBP7.58□□□□□ -1.2
CLN5-212ENST00000636602 TLR7Q9NYK1 1049 aaKnown RBP7.58□□□□□ -1.2
CLN5-212ENST00000636602 ARSDP51689 593 aa7.57□□□□□ -1.2
CLN5-212ENST00000636602 SIX5Q8N196 739 aa7.57□□□□□ -1.2
CLN5-212ENST00000636602 FAM46AQ96IP4 442 aaKnown RBP7.57□□□□□ -1.2
CLN5-212ENST00000636602 CARNS1A5YM72 827 aa7.56□□□□□ -1.2
CLN5-212ENST00000636602 PATL2C9JE40 543 aaKnown RBP7.56□□□□□ -1.2
CLN5-212ENST00000636602 DKK1O94907 266 aa7.56□□□□□ -1.2
CLN5-212ENST00000636602 WISP1O95388 367 aa7.56□□□□□ -1.2
CLN5-212ENST00000636602 GALNT11Q8NCW6 608 aa7.56□□□□□ -1.2
CLN5-212ENST00000636602 SHKBP1Q8TBC3 707 aa7.56□□□□□ -1.2
CLN5-212ENST00000636602 MUC3BQ9H195 1237 aa7.56□□□□□ -1.2
CLN5-212ENST00000636602 USP17L3A6NCW0 530 aa7.55□□□□□ -1.2
CLN5-212ENST00000636602 USP17L4A6NCW7 530 aa7.55□□□□□ -1.2
CLN5-212ENST00000636602 ATG7O95352 703 aa7.55□□□□□ -1.2
CLN5-212ENST00000636602 BRD1O95696 1058 aa7.55□□□□□ -1.2
CLN5-212ENST00000636602 GHRHP01286 108 aa7.55□□□□□ -1.2
CLN5-212ENST00000636602 TMCO4Q5TGY1 634 aa7.55□□□□□ -1.2
CLN5-212ENST00000636602 USP17L2Q6R6M4 530 aa7.55□□□□□ -1.2
CLN5-212ENST00000636602 ACAD11Q709F0 780 aa7.55□□□□□ -1.2
CLN5-212ENST00000636602 USP17L1Q7RTZ2 530 aa7.55□□□□□ -1.2
CLN5-212ENST00000636602 MYRFLQ96LU7 910 aa7.55□□□□□ -1.2
CLN5-212ENST00000636602 KLK14Q9P0G3 267 aa7.55□□□□□ -1.2
CLN5-212ENST00000636602 PPME1Q9Y570 386 aa7.55□□□□□ -1.2
CLN5-212ENST00000636602 KCNA1Q09470 495 aa7.54□□□□□ -1.2
CLN5-212ENST00000636602 CLEC10AQ8IUN9 316 aa7.54□□□□□ -1.2
CLN5-212ENST00000636602 CACTIN-AS1Q8N1I8 211 aa7.54□□□□□ -1.2
CLN5-212ENST00000636602 ASIC4Q96FT7 647 aa7.54□□□□□ -1.2
CLN5-212ENST00000636602 FAM83CQ9BQN1 747 aa7.54□□□□□ -1.2
CLN5-212ENST00000636602 VRTNQ9H8Y1 702 aa7.54□□□□□ -1.2
CLN5-212ENST00000636602 TRIM33Q9UPN9 1127 aa7.54□□□□□ -1.2
CLN5-212ENST00000636602 RBM19Q9Y4C8 960 aaKnown RBP7.54□□□□□ -1.2
CLN5-212ENST00000636602 HOXA10P31260 410 aaPredicted RBP7.53□□□□□ -1.2
CLN5-212ENST00000636602 CBLL1Q75N03 491 aa7.53□□□□□ -1.2
CLN5-212ENST00000636602 ZNF594Q96JF6 807 aaPredicted RBP7.53□□□□□ -1.2
CLN5-212ENST00000636602 NSUN5Q96P11 429 aaKnown RBP7.53□□□□□ -1.2
CLN5-212ENST00000636602 RBSNQ9H1K0 784 aa7.53□□□□□ -1.2
CLN5-212ENST00000636602 MICAL2O94851 1124 aa7.52□□□□□ -1.21
CLN5-212ENST00000636602 EGFRP00533 1210 aa7.52□□□□□ -1.21
CLN5-212ENST00000636602 PSAPP07602 524 aa7.52□□□□□ -1.21
CLN5-212ENST00000636602 RASA1P20936 1047 aa7.52□□□□□ -1.21
CLN5-212ENST00000636602 CD68P34810 354 aaPredicted RBP7.52□□□□□ -1.21
CLN5-212ENST00000636602 FAM20CQ8IXL6 584 aa7.52□□□□□ -1.21
CLN5-212ENST00000636602 KCNK4Q9NYG8 393 aa7.52□□□□□ -1.21
CLN5-212ENST00000636602 MKRN1Q9UHC7 482 aaKnown RBP7.52□□□□□ -1.21
CLN5-212ENST00000636602 LINC01387J3KSC0 135 aa7.51□□□□□ -1.21
CLN5-212ENST00000636602 HOXD8P13378 290 aaPredicted RBP7.51□□□□□ -1.21
CLN5-212ENST00000636602 KANK4Q5T7N3 995 aaPredicted RBP7.51□□□□□ -1.21
CLN5-212ENST00000636602 ANGEL1Q9UNK9 670 aaKnown RBP7.51□□□□□ -1.21
CLN5-212ENST00000636602 TMEM88BA6NKF7 163 aa7.5□□□□□ -1.21
CLN5-212ENST00000636602 TM4SF5O14894 197 aa7.5□□□□□ -1.21
CLN5-212ENST00000636602 DGKZQ13574 1117 aa7.5□□□□□ -1.21
CLN5-212ENST00000636602 KIAA1211Q6ZU35 1233 aa7.5□□□□□ -1.21
CLN5-212ENST00000636602 WDR64B1ANS9 1081 aa7.49□□□□□ -1.21
CLN5-212ENST00000636602 OPLAHO14841 1288 aa7.49□□□□□ -1.21
CLN5-212ENST00000636602 MMP20O60882 483 aa7.49□□□□□ -1.21
CLN5-212ENST00000636602 XYLBO75191 536 aa7.49□□□□□ -1.21
CLN5-212ENST00000636602 SOX18P35713 384 aa7.49□□□□□ -1.21
CLN5-212ENST00000636602 MFAP1P55081 439 aaKnown RBP7.49□□□□□ -1.21
CLN5-212ENST00000636602 BEND4Q6ZU67 534 aa7.49□□□□□ -1.21
CLN5-212ENST00000636602 KRTAP4-5Q9BYR2 181 aa7.49□□□□□ -1.21
CLN5-212ENST00000636602 KCNF1Q9H3M0 494 aa7.49□□□□□ -1.21
CLN5-212ENST00000636602 PIM2Q9P1W9 311 aa7.49□□□□□ -1.21
CLN5-212ENST00000636602 USP20Q9Y2K6 914 aa7.49□□□□□ -1.21
CLN5-212ENST00000636602 RTCBQ9Y3I0 505 aaKnown RBP7.49□□□□□ -1.21
CLN5-212ENST00000636602 BMP3P12645 472 aa7.48□□□□□ -1.21
CLN5-212ENST00000636602 ITGB5P18084 799 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms