RNA–Protein interactions for RNA: ENST00000636405.1

CLN5-209, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 2,511 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-209ENST00000636405 F13A1P00488 732 aa17.87■□□□□ 0.45
CLN5-209ENST00000636405 IFIT5Q13325 482 aaKnown RBP17.87■□□□□ 0.45
CLN5-209ENST00000636405 USPL1Q5W0Q7 1092 aa17.87■□□□□ 0.45
CLN5-209ENST00000636405 STOX1Q6ZVD7 989 aa17.87■□□□□ 0.45
CLN5-209ENST00000636405 FERMT3Q86UX7 667 aa17.87■□□□□ 0.45
CLN5-209ENST00000636405 FAM173BQ6P4H8 233 aa17.87■□□□□ 0.45
CLN5-209ENST00000636405 SH2B1Q9NRF2 756 aaPredicted RBP17.87■□□□□ 0.45
CLN5-209ENST00000636405 MTMR6Q9Y217 621 aa17.87■□□□□ 0.45
CLN5-209ENST00000636405 DISP2A7MBM2 1401 aa17.86■□□□□ 0.45
CLN5-209ENST00000636405 CIAO1O76071 339 aa17.86■□□□□ 0.45
CLN5-209ENST00000636405 TRIM28Q13263 835 aaKnown RBP17.86■□□□□ 0.45
CLN5-209ENST00000636405 NEK1Q96PY6 1258 aa17.86■□□□□ 0.45
CLN5-209ENST00000636405 GPR108Q9NPR9 543 aa17.86■□□□□ 0.45
CLN5-209ENST00000636405 TRMT112Q9UI30 125 aaKnown RBP17.86■□□□□ 0.45
CLN5-209ENST00000636405 ITGA6P23229 1130 aa17.86■□□□□ 0.45
CLN5-209ENST00000636405 DNM1Q05193 864 aaKnown RBP17.86■□□□□ 0.45
CLN5-209ENST00000636405 JCADQ9P266 1359 aa17.85■□□□□ 0.45
CLN5-209ENST00000636405 PPFIA3O75145 1194 aa17.85■□□□□ 0.45
CLN5-209ENST00000636405 TTC39AQ5SRH9 613 aa17.85■□□□□ 0.45
CLN5-209ENST00000636405 TTLL5Q6EMB2 1281 aa17.85■□□□□ 0.45
CLN5-209ENST00000636405 FAM43AQ8N2R8 423 aa17.85■□□□□ 0.45
CLN5-209ENST00000636405 TTLL11Q8NHH1 800 aa17.85■□□□□ 0.45
CLN5-209ENST00000636405 M0R2C6 588 aa17.84■□□□□ 0.45
CLN5-209ENST00000636405 CSF1RP07333 972 aa17.84■□□□□ 0.45
CLN5-209ENST00000636405 LDHAL6AQ6ZMR3 332 aa17.84■□□□□ 0.45
CLN5-209ENST00000636405 Q6ZUG5 572 aa17.84■□□□□ 0.45
CLN5-209ENST00000636405 DZIP3Q86Y13 1208 aaKnown RBP17.84■□□□□ 0.45
CLN5-209ENST00000636405 HMG20BQ9P0W2 317 aa17.84■□□□□ 0.45
CLN5-209ENST00000636405 IRS4O14654 1257 aaPredicted RBP17.84■□□□□ 0.45
CLN5-209ENST00000636405 LARP1BQ659C4 914 aaKnown RBP17.84■□□□□ 0.45
CLN5-209ENST00000636405 CHST3Q7LGC8 479 aa17.84■□□□□ 0.45
CLN5-209ENST00000636405 RNF214Q8ND24 703 aa17.84■□□□□ 0.45
CLN5-209ENST00000636405 U3KPZ7 1027 aaPredicted RBP17.84■□□□□ 0.45
CLN5-209ENST00000636405 TCHHQ07283 1943 aa17.84■□□□□ 0.45
CLN5-209ENST00000636405 JAK2O60674 1132 aa17.83■□□□□ 0.45
CLN5-209ENST00000636405 ZAP70P43403 619 aa17.83■□□□□ 0.45
CLN5-209ENST00000636405 METTL24Q5JXM2 366 aa17.83■□□□□ 0.45
CLN5-209ENST00000636405 ZMYM1Q5SVZ6 1142 aa17.83■□□□□ 0.45
CLN5-209ENST00000636405 CDC37L1Q7L3B6 337 aa17.83■□□□□ 0.45
CLN5-209ENST00000636405 OSBP2Q969R2 916 aa17.83■□□□□ 0.45
CLN5-209ENST00000636405 ITGB4P16144 1822 aa17.83■□□□□ 0.45
CLN5-209ENST00000636405 MAST3O60307 1309 aa17.83■□□□□ 0.45
CLN5-209ENST00000636405 ROBO1Q9Y6N7 1651 aa17.83■□□□□ 0.44
CLN5-209ENST00000636405 TSGA10IPQ3SY00 556 aa17.83■□□□□ 0.44
CLN5-209ENST00000636405 CCDC158Q5M9N0 1113 aa17.83■□□□□ 0.44
CLN5-209ENST00000636405 HELBQ8NG08 1087 aaPredicted RBP17.83■□□□□ 0.44
CLN5-209ENST00000636405 UBN2Q6ZU65 1347 aa17.83■□□□□ 0.44
CLN5-209ENST00000636405 RNF113AO15541 343 aaKnown RBP17.82■□□□□ 0.44
CLN5-209ENST00000636405 MBD3O95983 291 aa17.82■□□□□ 0.44
CLN5-209ENST00000636405 HSPD1P10809 573 aaKnown RBP17.82■□□□□ 0.44
CLN5-209ENST00000636405 HSP90B1P14625 803 aaKnown RBP17.82■□□□□ 0.44
CLN5-209ENST00000636405 PIP4K2BP78356 416 aa17.82■□□□□ 0.44
CLN5-209ENST00000636405 SH3TC1Q8TE82 1336 aa17.82■□□□□ 0.44
CLN5-209ENST00000636405 SNAP23O00161 211 aa17.82■□□□□ 0.44
CLN5-209ENST00000636405 WASHC4Q2M389 1173 aa17.82■□□□□ 0.44
CLN5-209ENST00000636405 BRF1Q92994 677 aa17.82■□□□□ 0.44
CLN5-209ENST00000636405 CNNM1Q9NRU3 951 aa17.82■□□□□ 0.44
CLN5-209ENST00000636405 PALLDQ8WX93 1383 aa17.82■□□□□ 0.44
CLN5-209ENST00000636405 HCLS1P14317 486 aaPredicted RBP17.81■□□□□ 0.44
CLN5-209ENST00000636405 DDB1Q16531 1140 aa17.81■□□□□ 0.44
CLN5-209ENST00000636405 RIPOR2Q9Y4F9 1068 aa17.81■□□□□ 0.44
CLN5-209ENST00000636405 CTSWP56202 376 aa17.81■□□□□ 0.44
CLN5-209ENST00000636405 FGD1P98174 961 aa17.81■□□□□ 0.44
CLN5-209ENST00000636405 LRSAM1Q6UWE0 723 aa17.81■□□□□ 0.44
CLN5-209ENST00000636405 MARCH10Q8NA82 808 aaPredicted RBP17.81■□□□□ 0.44
CLN5-209ENST00000636405 DDX11Q96FC9 970 aa17.81■□□□□ 0.44
CLN5-209ENST00000636405 PLA2G12BQ9BX93 195 aa17.81■□□□□ 0.44
CLN5-209ENST00000636405 HELLSQ9NRZ9 838 aa17.81■□□□□ 0.44
CLN5-209ENST00000636405 FOSBP53539 338 aa17.8■□□□□ 0.44
CLN5-209ENST00000636405 HAND2P61296 217 aa17.8■□□□□ 0.44
CLN5-209ENST00000636405 ANKRD1Q15327 319 aa17.8■□□□□ 0.44
CLN5-209ENST00000636405 ATP6V1AP38606 617 aa17.8■□□□□ 0.44
CLN5-209ENST00000636405 KCNQ4P56696 695 aa17.8■□□□□ 0.44
CLN5-209ENST00000636405 KRT32Q14532 448 aa17.8■□□□□ 0.44
CLN5-209ENST00000636405 ATP2B3Q16720 1220 aa17.8■□□□□ 0.44
CLN5-209ENST00000636405 AKAP2Q9Y2D5 859 aa17.8■□□□□ 0.44
CLN5-209ENST00000636405 NAP1L2Q9ULW6 460 aaPredicted RBP17.79■□□□□ 0.44
CLN5-209ENST00000636405 COL16A1Q07092 1604 aaPredicted RBP17.79■□□□□ 0.44
CLN5-209ENST00000636405 ANKRD18BA2A2Z9 1011 aa17.79■□□□□ 0.44
CLN5-209ENST00000636405 KCNQ2O43526 872 aa17.79■□□□□ 0.44
CLN5-209ENST00000636405 PUS7LQ9H0K6 701 aaKnown RBP17.79■□□□□ 0.44
CLN5-209ENST00000636405 SPATA31A1Q5TZJ5 1347 aa17.79■□□□□ 0.44
CLN5-209ENST00000636405 RFX7Q2KHR2 1363 aa17.79■□□□□ 0.44
CLN5-209ENST00000636405 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.79■□□□□ 0.44
CLN5-209ENST00000636405 APOBRQ0VD83 1088 aa17.78■□□□□ 0.44
CLN5-209ENST00000636405 INTS5Q6P9B9 1019 aaKnown RBP17.78■□□□□ 0.44
CLN5-209ENST00000636405 SMIM5Q71RC9 77 aa17.78■□□□□ 0.44
CLN5-209ENST00000636405 COL14A1Q05707 1796 aaKnown RBP17.78■□□□□ 0.44
CLN5-209ENST00000636405 MCAMP43121 646 aa17.78■□□□□ 0.44
CLN5-209ENST00000636405 SUSD4Q5VX71 490 aa17.78■□□□□ 0.44
CLN5-209ENST00000636405 TRIM44Q96DX7 344 aaPredicted RBP17.78■□□□□ 0.44
CLN5-209ENST00000636405 GPHNQ9NQX3 736 aaPredicted RBP17.78■□□□□ 0.44
CLN5-209ENST00000636405 E7EWF7 191 aa17.77■□□□□ 0.44
CLN5-209ENST00000636405 FOXP2O15409 715 aa17.77■□□□□ 0.44
CLN5-209ENST00000636405 CRKLP46109 303 aaKnown RBP17.77■□□□□ 0.44
CLN5-209ENST00000636405 CCT2P78371 535 aaKnown RBP17.77■□□□□ 0.44
CLN5-209ENST00000636405 ITPK1Q13572 414 aa17.77■□□□□ 0.44
CLN5-209ENST00000636405 TFIP11Q9UBB9 837 aaKnown RBP17.77■□□□□ 0.44
CLN5-209ENST00000636405 RIC1Q4ADV7 1423 aa17.77■□□□□ 0.44
CLN5-209ENST00000636405 IL6STP40189 918 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms