RNA–Protein interactions for RNA: ENST00000636120.1

PDE4D-228, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 6,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-228ENST00000636120 ZNF790Q6PG37 636 aa7.46□□□□□ -1.21
PDE4D-228ENST00000636120 CLTCL1P53675 1640 aa7.46□□□□□ -1.21
PDE4D-228ENST00000636120 GOLGA6L10A6NI86 522 aa7.46□□□□□ -1.22
PDE4D-228ENST00000636120 TOP1P11387 765 aaKnown RBP7.46□□□□□ -1.22
PDE4D-228ENST00000636120 MCM3P25205 808 aa7.46□□□□□ -1.22
PDE4D-228ENST00000636120 BICC1Q9H694 974 aaKnown RBP7.46□□□□□ -1.22
PDE4D-228ENST00000636120 CLIP2Q9UDT6 1046 aa7.46□□□□□ -1.22
PDE4D-228ENST00000636120 MAGEB6P1A0A0J9YX57 407 aa7.46□□□□□ -1.22
PDE4D-228ENST00000636120 KLF18A0A0U1RQI7 1052 aa7.46□□□□□ -1.22
PDE4D-228ENST00000636120 SPA17Q15506 151 aa7.46□□□□□ -1.22
PDE4D-228ENST00000636120 SLC26A6Q9BXS9 759 aa7.46□□□□□ -1.22
PDE4D-228ENST00000636120 GTPBP4Q9BZE4 634 aaKnown RBP7.46□□□□□ -1.22
PDE4D-228ENST00000636120 SNRKQ9NRH2 765 aa7.46□□□□□ -1.22
PDE4D-228ENST00000636120 KDM2BQ8NHM5 1336 aa7.46□□□□□ -1.22
PDE4D-228ENST00000636120 IRS4O14654 1257 aaPredicted RBP7.46□□□□□ -1.22
PDE4D-228ENST00000636120 IFIT1BQ5T764 474 aaKnown RBP7.46□□□□□ -1.22
PDE4D-228ENST00000636120 LRSAM1Q6UWE0 723 aa7.46□□□□□ -1.22
PDE4D-228ENST00000636120 STXBP4Q6ZWJ1 553 aa7.46□□□□□ -1.22
PDE4D-228ENST00000636120 PDCL2Q8N4E4 241 aa7.46□□□□□ -1.22
PDE4D-228ENST00000636120 CCDC191Q8NCU4 936 aa7.46□□□□□ -1.22
PDE4D-228ENST00000636120 CNKSR2Q8WXI2 1034 aa7.46□□□□□ -1.22
PDE4D-228ENST00000636120 CCDC171Q6TFL3 1326 aa7.46□□□□□ -1.22
PDE4D-228ENST00000636120 ARHGAP31Q2M1Z3 1444 aa7.46□□□□□ -1.22
PDE4D-228ENST00000636120 GOLGA6L9A6NEM1 432 aa7.46□□□□□ -1.22
PDE4D-228ENST00000636120 GUCY1B3Q02153 619 aa7.46□□□□□ -1.22
PDE4D-228ENST00000636120 ATL3Q6DD88 541 aa7.46□□□□□ -1.22
PDE4D-228ENST00000636120 NAA16Q6N069 864 aaPredicted RBP7.46□□□□□ -1.22
PDE4D-228ENST00000636120 Q6ZUG5 572 aa7.46□□□□□ -1.22
PDE4D-228ENST00000636120 RUFY3Q7L099 469 aa7.46□□□□□ -1.22
PDE4D-228ENST00000636120 RTN1Q16799 776 aa7.45□□□□□ -1.22
PDE4D-228ENST00000636120 ARHGAP29Q52LW3 1261 aa7.45□□□□□ -1.22
PDE4D-228ENST00000636120 TPTE2Q6XPS3 522 aa7.45□□□□□ -1.22
PDE4D-228ENST00000636120 TAF4BQ92750 862 aa7.45□□□□□ -1.22
PDE4D-228ENST00000636120 GBP3Q9H0R5 595 aa7.45□□□□□ -1.22
PDE4D-228ENST00000636120 LMTK3Q96Q04 1460 aa7.45□□□□□ -1.22
PDE4D-228ENST00000636120 MYO1BO43795 1136 aa7.45□□□□□ -1.22
PDE4D-228ENST00000636120 CHMLP26374 656 aa7.45□□□□□ -1.22
PDE4D-228ENST00000636120 TFCP2Q12800 502 aa7.45□□□□□ -1.22
PDE4D-228ENST00000636120 UQCRHLA0A096LP55 91 aa7.45□□□□□ -1.22
PDE4D-228ENST00000636120 UQCRHP07919 91 aa7.45□□□□□ -1.22
PDE4D-228ENST00000636120 TSPY3P0CV98 308 aa7.45□□□□□ -1.22
PDE4D-228ENST00000636120 TSPY8P0CW00 308 aa7.45□□□□□ -1.22
PDE4D-228ENST00000636120 ZSCAN23Q3MJ62 389 aa7.45□□□□□ -1.22
PDE4D-228ENST00000636120 CCDC102BQ68D86 513 aa7.45□□□□□ -1.22
PDE4D-228ENST00000636120 VPS36Q86VN1 386 aa7.45□□□□□ -1.22
PDE4D-228ENST00000636120 CCDC150Q8NCX0 1101 aa7.45□□□□□ -1.22
PDE4D-228ENST00000636120 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.45□□□□□ -1.22
PDE4D-228ENST00000636120 RTCBQ9Y3I0 505 aaKnown RBP7.45□□□□□ -1.22
PDE4D-228ENST00000636120 F13A1P00488 732 aa7.45□□□□□ -1.22
PDE4D-228ENST00000636120 FILIP1Q7Z7B0 1213 aa7.45□□□□□ -1.22
PDE4D-228ENST00000636120 BRF1Q92994 677 aa7.45□□□□□ -1.22
PDE4D-228ENST00000636120 HDAC9Q9UKV0 1011 aa7.45□□□□□ -1.22
PDE4D-228ENST00000636120 CASQ1P31415 396 aa7.45□□□□□ -1.22
PDE4D-228ENST00000636120 CREB3L3Q68CJ9 461 aa7.45□□□□□ -1.22
PDE4D-228ENST00000636120 MICU3Q86XE3 530 aa7.45□□□□□ -1.22
PDE4D-228ENST00000636120 CERS3Q8IU89 383 aa7.45□□□□□ -1.22
PDE4D-228ENST00000636120 USP26Q9BXU7 913 aa7.45□□□□□ -1.22
PDE4D-228ENST00000636120 RBM28Q9NW13 759 aaKnown RBP7.45□□□□□ -1.22
PDE4D-228ENST00000636120 ABCA9Q8IUA7 1624 aa7.44□□□□□ -1.22
PDE4D-228ENST00000636120 KIF5CO60282 957 aa7.44□□□□□ -1.22
PDE4D-228ENST00000636120 YEATS4O95619 227 aa7.44□□□□□ -1.22
PDE4D-228ENST00000636120 NBPF7P0C2Y1 421 aaPredicted RBP7.44□□□□□ -1.22
PDE4D-228ENST00000636120 MATR3P43243 847 aaKnown RBP eCLIP7.44□□□□□ -1.228e-7■■■■□ 21.5
PDE4D-228ENST00000636120 HAND2P61296 217 aa7.44□□□□□ -1.22
PDE4D-228ENST00000636120 PTPN14Q15678 1187 aa7.44□□□□□ -1.22
PDE4D-228ENST00000636120 SLC9C2Q5TAH2 1124 aa7.44□□□□□ -1.22
PDE4D-228ENST00000636120 CCDC66A2RUB6 948 aa7.44□□□□□ -1.22
PDE4D-228ENST00000636120 CWF19L2Q2TBE0 894 aaKnown RBP7.44□□□□□ -1.22
PDE4D-228ENST00000636120 MPHOSPH6Q99547 160 aaKnown RBP7.44□□□□□ -1.22
PDE4D-228ENST00000636120 ERVV-2B6SEH9 535 aa7.44□□□□□ -1.22
PDE4D-228ENST00000636120 UBAP1LF5GYI3 381 aa7.44□□□□□ -1.22
PDE4D-228ENST00000636120 C16orf71Q8IYS4 520 aaPredicted RBP7.44□□□□□ -1.22
PDE4D-228ENST00000636120 ACSBG1Q96GR2 724 aa7.44□□□□□ -1.22
PDE4D-228ENST00000636120 RBM17Q96I25 401 aaKnown RBP7.44□□□□□ -1.22
PDE4D-228ENST00000636120 ALG1Q9BT22 464 aa7.44□□□□□ -1.22
PDE4D-228ENST00000636120 DENND2AQ9ULE3 1009 aa7.44□□□□□ -1.22
PDE4D-228ENST00000636120 CDC42BPGQ6DT37 1551 aa7.44□□□□□ -1.22
PDE4D-228ENST00000636120 RAB3GAP1Q15042 981 aa7.44□□□□□ -1.22
PDE4D-228ENST00000636120 LEKR1Q6ZMV7 388 aa7.44□□□□□ -1.22
PDE4D-228ENST00000636120 CABLES1Q8TDN4 633 aa7.44□□□□□ -1.22
PDE4D-228ENST00000636120 PA2G4Q9UQ80 394 aaKnown RBP7.44□□□□□ -1.22
PDE4D-228ENST00000636120 JARID2Q92833 1246 aaPredicted RBP7.44□□□□□ -1.22
PDE4D-228ENST00000636120 CTAGE1Q96RT6 745 aa7.44□□□□□ -1.22
PDE4D-228ENST00000636120 CDK12Q9NYV4 1490 aaPredicted RBP7.43□□□□□ -1.22
PDE4D-228ENST00000636120 ABCC4O15439 1325 aa7.43□□□□□ -1.22
PDE4D-228ENST00000636120 SETBP1Q9Y6X0 1596 aa7.43□□□□□ -1.22
PDE4D-228ENST00000636120 PRC1O43663 620 aa7.43□□□□□ -1.22
PDE4D-228ENST00000636120 BRAPQ7Z569 592 aa7.43□□□□□ -1.22
PDE4D-228ENST00000636120 TNNQ9UQP3 1299 aa7.43□□□□□ -1.22
PDE4D-228ENST00000636120 KDRP35968 1356 aa7.43□□□□□ -1.22
PDE4D-228ENST00000636120 RNF17Q9BXT8 1623 aaKnown RBP7.43□□□□□ -1.22
PDE4D-228ENST00000636120 WDHD1O75717 1129 aaPredicted RBP7.43□□□□□ -1.22
PDE4D-228ENST00000636120 ERMNQ8TAM6 284 aa7.43□□□□□ -1.22
PDE4D-228ENST00000636120 NPHP4O75161 1426 aaPredicted RBP7.43□□□□□ -1.22
PDE4D-228ENST00000636120 USO1O60763 962 aaKnown RBP7.43□□□□□ -1.22
PDE4D-228ENST00000636120 DHX32Q7L7V1 743 aaKnown RBP7.43□□□□□ -1.22
PDE4D-228ENST00000636120 KIF18AQ8NI77 898 aa7.43□□□□□ -1.22
PDE4D-228ENST00000636120 SSH2Q76I76 1423 aa7.43□□□□□ -1.22
PDE4D-228ENST00000636120 POTEB2H3BUK9 544 aa7.43□□□□□ -1.22
PDE4D-228ENST00000636120 PDE8AO60658 829 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms