RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-223	ENST00000636058	RPS8	P62241	208 aa	Known RBP	11.79	□□□□□ -0.52
CACNA1A-223	ENST00000636058	GRAP	Q13588	217 aa		11.79	□□□□□ -0.52
CACNA1A-223	ENST00000636058	AACS	Q86V21	672 aa		11.79	□□□□□ -0.52
CACNA1A-223	ENST00000636058	GRAPL	Q8TC17	118 aa	Predicted RBP	11.79	□□□□□ -0.52
CACNA1A-223	ENST00000636058	RPGR	Q92834	1020 aa	Known RBP	11.79	□□□□□ -0.52
CACNA1A-223	ENST00000636058	BCL11A	Q9H165	835 aa		11.79	□□□□□ -0.52
CACNA1A-223	ENST00000636058	CEP126	Q9P2H0	1117 aa		11.79	□□□□□ -0.52
CACNA1A-223	ENST00000636058	STAP2	Q9UGK3	403 aa		11.79	□□□□□ -0.52
CACNA1A-223	ENST00000636058	PSD	A5PKW4	1024 aa	Predicted RBP	11.78	□□□□□ -0.52
CACNA1A-223	ENST00000636058	PDE8B	O95263	885 aa		11.78	□□□□□ -0.52
CACNA1A-223	ENST00000636058	IFIT2	P09913	472 aa	Known RBP	11.78	□□□□□ -0.52
CACNA1A-223	ENST00000636058	SRGN	P10124	158 aa		11.78	□□□□□ -0.52
CACNA1A-223	ENST00000636058	PDE1A	P54750	535 aa		11.78	□□□□□ -0.52
CACNA1A-223	ENST00000636058	METTL24	Q5JXM2	366 aa		11.78	□□□□□ -0.52
CACNA1A-223	ENST00000636058	RBM17	Q96I25	401 aa	Known RBP	11.78	□□□□□ -0.52
CACNA1A-223	ENST00000636058	CRAMP1	Q96RY5	1269 aa		11.78	□□□□□ -0.52
CACNA1A-223	ENST00000636058	AOX1	Q06278	1338 aa		11.78	□□□□□ -0.52
CACNA1A-223	ENST00000636058	ARAP2	Q8WZ64	1704 aa		11.77	□□□□□ -0.52
CACNA1A-223	ENST00000636058	DLEC1	Q9Y238	1755 aa		11.77	□□□□□ -0.52
CACNA1A-223	ENST00000636058	NPR1	P16066	1061 aa		11.77	□□□□□ -0.53
CACNA1A-223	ENST00000636058	PELP1	Q8IZL8	1130 aa	Known RBP	11.77	□□□□□ -0.53
CACNA1A-223	ENST00000636058	SGIP1	Q9BQI5	828 aa		11.77	□□□□□ -0.53
CACNA1A-223	ENST00000636058	CCDC8	Q9H0W5	538 aa	Predicted RBP	11.77	□□□□□ -0.53
CACNA1A-223	ENST00000636058	TLR7	Q9NYK1	1049 aa	Known RBP	11.77	□□□□□ -0.53
CACNA1A-223	ENST00000636058	DBNL	Q9UJU6	430 aa	Known RBP	11.77	□□□□□ -0.53
CACNA1A-223	ENST00000636058	AKAP2	Q9Y2D5	859 aa		11.77	□□□□□ -0.53
CACNA1A-223	ENST00000636058	TTC41P	Q6P2S7	1318 aa		11.77	□□□□□ -0.53
CACNA1A-223	ENST00000636058	LRRC37A	A6NMS7	1700 aa		11.77	□□□□□ -0.53
CACNA1A-223	ENST00000636058		A0A1B0GUL7	405 aa		11.76	□□□□□ -0.53
CACNA1A-223	ENST00000636058	BBOX1	O75936	387 aa		11.76	□□□□□ -0.53
CACNA1A-223	ENST00000636058	FGFR2	P21802	821 aa		11.76	□□□□□ -0.53
CACNA1A-223	ENST00000636058	POLD1	P28340	1107 aa		11.76	□□□□□ -0.53
CACNA1A-223	ENST00000636058	CHRND	Q07001	517 aa		11.76	□□□□□ -0.53
CACNA1A-223	ENST00000636058	PUM3	Q15397	648 aa	Known RBP	11.76	□□□□□ -0.53
CACNA1A-223	ENST00000636058	TTC22	Q5TAA0	569 aa		11.76	□□□□□ -0.53
CACNA1A-223	ENST00000636058	PI4K2B	Q8TCG2	481 aa		11.76	□□□□□ -0.53
CACNA1A-223	ENST00000636058	MASTL	Q96GX5	879 aa		11.76	□□□□□ -0.53
CACNA1A-223	ENST00000636058	ECHDC1	Q9NTX5	307 aa		11.76	□□□□□ -0.53
CACNA1A-223	ENST00000636058	MINPP1	Q9UNW1	487 aa		11.76	□□□□□ -0.53
CACNA1A-223	ENST00000636058	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.76	□□□□□ -0.53
CACNA1A-223	ENST00000636058	GSPT1	P15170	499 aa	Known RBP	11.75	□□□□□ -0.53
CACNA1A-223	ENST00000636058	TIMM10	P62072	90 aa		11.75	□□□□□ -0.53
CACNA1A-223	ENST00000636058	ATP2B3	Q16720	1220 aa		11.75	□□□□□ -0.53
CACNA1A-223	ENST00000636058	BMP2KL	Q5H9B9	411 aa		11.75	□□□□□ -0.53
CACNA1A-223	ENST00000636058	TSHZ3	Q63HK5	1081 aa		11.75	□□□□□ -0.53
CACNA1A-223	ENST00000636058	STYK1	Q6J9G0	422 aa		11.75	□□□□□ -0.53
CACNA1A-223	ENST00000636058	C2CD5	Q86YS7	1000 aa		11.75	□□□□□ -0.53
CACNA1A-223	ENST00000636058	HELB	Q8NG08	1087 aa	Predicted RBP	11.75	□□□□□ -0.53
CACNA1A-223	ENST00000636058	GPATCH3	Q96I76	525 aa		11.75	□□□□□ -0.53
CACNA1A-223	ENST00000636058	DBNDD2	Q9BQY9	259 aa		11.75	□□□□□ -0.53
CACNA1A-223	ENST00000636058	KIAA1551	Q9HCM1	1747 aa		11.74	□□□□□ -0.53
CACNA1A-223	ENST00000636058		H0YIN7	160 aa		11.74	□□□□□ -0.53
CACNA1A-223	ENST00000636058	TAF5L	O75529	589 aa		11.74	□□□□□ -0.53
CACNA1A-223	ENST00000636058	ALDH1B1	P30837	517 aa		11.74	□□□□□ -0.53
CACNA1A-223	ENST00000636058	PTGER2	P43116	358 aa		11.74	□□□□□ -0.53
CACNA1A-223	ENST00000636058	TMC4	Q7Z404	712 aa		11.74	□□□□□ -0.53
CACNA1A-223	ENST00000636058	LPIN2	Q92539	896 aa		11.74	□□□□□ -0.53
CACNA1A-223	ENST00000636058	NEUROD6	Q96NK8	337 aa		11.74	□□□□□ -0.53
CACNA1A-223	ENST00000636058	ANKRD2	Q9GZV1	360 aa		11.74	□□□□□ -0.53
CACNA1A-223	ENST00000636058	LTBP1	Q14766	1721 aa		11.74	□□□□□ -0.53
CACNA1A-223	ENST00000636058	PPEF1	O14829	653 aa	Predicted RBP	11.73	□□□□□ -0.53
CACNA1A-223	ENST00000636058	ERC2	O15083	957 aa		11.73	□□□□□ -0.53
CACNA1A-223	ENST00000636058	GLRX3	O76003	335 aa	Known RBP	11.73	□□□□□ -0.53
CACNA1A-223	ENST00000636058	CHRNA5	P30532	468 aa		11.73	□□□□□ -0.53
CACNA1A-223	ENST00000636058	CACNA1S	Q13698	1873 aa		11.73	□□□□□ -0.53
CACNA1A-223	ENST00000636058	XAGE2	Q96GT9	111 aa		11.73	□□□□□ -0.53
CACNA1A-223	ENST00000636058	SLC5A1	P13866	664 aa		11.72	□□□□□ -0.53
CACNA1A-223	ENST00000636058	ATP5J	P18859	108 aa		11.72	□□□□□ -0.53
CACNA1A-223	ENST00000636058	ADORA1	P30542	326 aa		11.72	□□□□□ -0.53
CACNA1A-223	ENST00000636058	UBE4A	Q14139	1066 aa		11.72	□□□□□ -0.53
CACNA1A-223	ENST00000636058	SLC51A	Q86UW1	340 aa		11.72	□□□□□ -0.53
CACNA1A-223	ENST00000636058	SP8	Q8IXZ3	490 aa		11.72	□□□□□ -0.53
CACNA1A-223	ENST00000636058	CNKSR1	Q969H4	720 aa		11.72	□□□□□ -0.53
CACNA1A-223	ENST00000636058	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
CACNA1A-223	ENST00000636058	ATP6V0A2	Q9Y487	856 aa		11.72	□□□□□ -0.53
CACNA1A-223	ENST00000636058	XDH	P47989	1333 aa		11.71	□□□□□ -0.53
CACNA1A-223	ENST00000636058	SNAP23	O00161	211 aa		11.71	□□□□□ -0.53
CACNA1A-223	ENST00000636058	IFIT1	P09914	478 aa	Known RBP	11.71	□□□□□ -0.53
CACNA1A-223	ENST00000636058	SDS	P20132	328 aa		11.71	□□□□□ -0.53
CACNA1A-223	ENST00000636058	TGFB2	P61812	414 aa		11.71	□□□□□ -0.53
CACNA1A-223	ENST00000636058	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
CACNA1A-223	ENST00000636058	PODXL2	Q9NZ53	605 aa		11.71	□□□□□ -0.53
CACNA1A-223	ENST00000636058	SLX4	Q8IY92	1834 aa		11.71	□□□□□ -0.54
CACNA1A-223	ENST00000636058	ZNF804B	A4D1E1	1349 aa		11.7	□□□□□ -0.54
CACNA1A-223	ENST00000636058	IRS2	Q9Y4H2	1338 aa		11.7	□□□□□ -0.54
CACNA1A-223	ENST00000636058	WTIP	A6NIX2	430 aa	Predicted RBP	11.7	□□□□□ -0.54
CACNA1A-223	ENST00000636058	KCNA3	P22001	575 aa		11.7	□□□□□ -0.54
CACNA1A-223	ENST00000636058	GPSM2	P81274	684 aa		11.7	□□□□□ -0.54
CACNA1A-223	ENST00000636058	C8orf34	Q49A92	452 aa		11.7	□□□□□ -0.54
CACNA1A-223	ENST00000636058	CCDC158	Q5M9N0	1113 aa		11.7	□□□□□ -0.54
CACNA1A-223	ENST00000636058	GORAB	Q5T7V8	394 aa		11.7	□□□□□ -0.54
CACNA1A-223	ENST00000636058	CCDC102B	Q68D86	513 aa		11.7	□□□□□ -0.54
CACNA1A-223	ENST00000636058	PRPF40B	Q6NWY9	871 aa	Known RBP	11.7	□□□□□ -0.54
CACNA1A-223	ENST00000636058	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.7	□□□□□ -0.54
CACNA1A-223	ENST00000636058	ANKIB1	Q9P2G1	1089 aa		11.7	□□□□□ -0.54
CACNA1A-223	ENST00000636058	LEMD3	Q9Y2U8	911 aa		11.7	□□□□□ -0.54
CACNA1A-223	ENST00000636058	CD2AP	Q9Y5K6	639 aa		11.7	□□□□□ -0.54
CACNA1A-223	ENST00000636058	DUOX1	Q9NRD9	1551 aa		11.7	□□□□□ -0.54
CACNA1A-223	ENST00000636058	BRCA1	P38398	1863 aa	Known RBP	11.7	□□□□□ -0.54
CACNA1A-223	ENST00000636058	AK9	Q5TCS8	1911 aa		11.69	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms