RNA–Protein interactions for RNA: ENST00000630224.2

TCF4-269, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-269ENST00000630224 SPIRE2Q8WWL2 714 aa8.08□□□□□ -1.12
TCF4-269ENST00000630224 ATG3Q9NT62 314 aa8.08□□□□□ -1.12
TCF4-269ENST00000630224 FCF1Q9Y324 198 aaKnown RBP8.08□□□□□ -1.12
TCF4-269ENST00000630224 COL5A3P25940 1745 aaPredicted RBP8.08□□□□□ -1.12
TCF4-269ENST00000630224 ZBTB24O43167 697 aaPredicted RBP8.07□□□□□ -1.12
TCF4-269ENST00000630224 IL13P35225 146 aa8.07□□□□□ -1.12
TCF4-269ENST00000630224 EIF4A2Q14240 407 aaKnown RBP8.07□□□□□ -1.12
TCF4-269ENST00000630224 NGEFQ8N5V2 710 aa8.07□□□□□ -1.12
TCF4-269ENST00000630224 RUNDC1Q96C34 613 aa8.07□□□□□ -1.12
TCF4-269ENST00000630224 DCAF5Q96JK2 942 aa8.07□□□□□ -1.12
TCF4-269ENST00000630224 SLC4A9Q96Q91 983 aa8.07□□□□□ -1.12
TCF4-269ENST00000630224 TBC1D2Q9BYX2 928 aa8.07□□□□□ -1.12
TCF4-269ENST00000630224 PRDM9Q9NQV7 894 aa8.07□□□□□ -1.12
TCF4-269ENST00000630224 SRP68Q9UHB9 627 aaKnown RBP8.07□□□□□ -1.12
TCF4-269ENST00000630224 SPG7Q9UQ90 795 aa8.07□□□□□ -1.12
TCF4-269ENST00000630224 COL3A1P02461 1466 aaPredicted RBP8.06□□□□□ -1.12
TCF4-269ENST00000630224 TIAM2Q8IVF5 1701 aa8.06□□□□□ -1.12
TCF4-269ENST00000630224 MAPK8IP3Q9UPT6 1336 aa8.06□□□□□ -1.12
TCF4-269ENST00000630224 MKRN1Q9UHC7 482 aaKnown RBP8.06□□□□□ -1.12
TCF4-269ENST00000630224 ZBED9Q6R2W3 1325 aa8.05□□□□□ -1.12
TCF4-269ENST00000630224 MOXD2PA6NHM9 499 aa8.05□□□□□ -1.12
TCF4-269ENST00000630224 PHKG2P15735 406 aa8.05□□□□□ -1.12
TCF4-269ENST00000630224 NDUFV2P19404 249 aa8.05□□□□□ -1.12
TCF4-269ENST00000630224 DDR1Q08345 913 aa8.05□□□□□ -1.12
TCF4-269ENST00000630224 RETREG3Q86VR2 466 aa8.05□□□□□ -1.12
TCF4-269ENST00000630224 CCDC146Q8IYE0 955 aa8.05□□□□□ -1.12
TCF4-269ENST00000630224 FAM160A2Q8N612 972 aaPredicted RBP8.05□□□□□ -1.12
TCF4-269ENST00000630224 AFDNP55196 1824 aaKnown RBP8.05□□□□□ -1.12
TCF4-269ENST00000630224 PTCD1O75127 700 aaKnown RBP8.04□□□□□ -1.12
TCF4-269ENST00000630224 RPS6KA4O75676 772 aa8.04□□□□□ -1.12
TCF4-269ENST00000630224 VEGFAP15692 232 aaPredicted RBP8.04□□□□□ -1.12
TCF4-269ENST00000630224 LAPTM4AQ15012 233 aa8.04□□□□□ -1.12
TCF4-269ENST00000630224 IFNL2Q8IZJ0 200 aa8.04□□□□□ -1.12
TCF4-269ENST00000630224 CCDC24Q8N4L8 307 aa8.04□□□□□ -1.12
TCF4-269ENST00000630224 KDRP35968 1356 aa8.04□□□□□ -1.12
TCF4-269ENST00000630224 APAF1O14727 1248 aa8.03□□□□□ -1.12
TCF4-269ENST00000630224 HMOX1P09601 288 aa8.03□□□□□ -1.12
TCF4-269ENST00000630224 PRKAR2BP31323 418 aa8.03□□□□□ -1.12
TCF4-269ENST00000630224 MTMR2Q13614 643 aa8.03□□□□□ -1.12
TCF4-269ENST00000630224 SULT6B1Q6IMI4 303 aa8.03□□□□□ -1.12
TCF4-269ENST00000630224 SYMPKQ92797 1274 aaKnown RBP8.03□□□□□ -1.12
TCF4-269ENST00000630224 RSPH6AQ9H0K4 717 aa8.03□□□□□ -1.12
TCF4-269ENST00000630224 CACNA1SQ13698 1873 aa8.02□□□□□ -1.12
TCF4-269ENST00000630224 GLTPD2A6NH11 291 aa8.02□□□□□ -1.13
TCF4-269ENST00000630224 FOXN1O15353 648 aa8.02□□□□□ -1.13
TCF4-269ENST00000630224 LMNB1P20700 586 aa8.02□□□□□ -1.13
TCF4-269ENST00000630224 RC3H1Q5TC82 1133 aaKnown RBP8.02□□□□□ -1.13
TCF4-269ENST00000630224 ZNF697Q5TEC3 545 aa8.02□□□□□ -1.13
TCF4-269ENST00000630224 CNTNAP4Q9C0A0 1308 aa8.02□□□□□ -1.13
TCF4-269ENST00000630224 ZNF831Q5JPB2 1677 aa8.02□□□□□ -1.13
TCF4-269ENST00000630224 TJP1Q07157 1748 aa8.01□□□□□ -1.13
TCF4-269ENST00000630224 SPDYE5A6NIY4 337 aa8.01□□□□□ -1.13
TCF4-269ENST00000630224 GFRA3O60609 400 aa8.01□□□□□ -1.13
TCF4-269ENST00000630224 CD2BP2O95400 341 aaKnown RBP8.01□□□□□ -1.13
TCF4-269ENST00000630224 JUNDP17535 347 aa8.01□□□□□ -1.13
TCF4-269ENST00000630224 CRKLP46109 303 aaKnown RBP8.01□□□□□ -1.13
TCF4-269ENST00000630224 MMP16P51512 607 aa8.01□□□□□ -1.13
TCF4-269ENST00000630224 CABP4P57796 275 aa8.01□□□□□ -1.13
TCF4-269ENST00000630224 LMOD3Q0VAK6 560 aa8.01□□□□□ -1.13
TCF4-269ENST00000630224 CSPP1Q1MSJ5 1256 aa8.01□□□□□ -1.13
TCF4-269ENST00000630224 TPRNQ4KMQ1 711 aa8.01□□□□□ -1.13
TCF4-269ENST00000630224 SPRYD7Q5W111 196 aa8.01□□□□□ -1.13
TCF4-269ENST00000630224 RSBN1LQ6PCB5 846 aaPredicted RBP8.01□□□□□ -1.13
TCF4-269ENST00000630224 RIC3Q7Z5B4 369 aa8.01□□□□□ -1.13
TCF4-269ENST00000630224 ZNF598Q86UK7 904 aaKnown RBP8.01□□□□□ -1.13
TCF4-269ENST00000630224 AEBP1Q8IUX7 1158 aa8.01□□□□□ -1.13
TCF4-269ENST00000630224 PLEKHF1Q96S99 279 aa8.01□□□□□ -1.13
TCF4-269ENST00000630224 PCDHGC3Q9UN70 934 aa8.01□□□□□ -1.13
TCF4-269ENST00000630224 PDZRN3Q9UPQ7 1066 aa8.01□□□□□ -1.13
TCF4-269ENST00000630224 DLEC1Q9Y238 1755 aa8.01□□□□□ -1.13
TCF4-269ENST00000630224 USP42Q9H9J4 1324 aaKnown RBP8.01□□□□□ -1.13
TCF4-269ENST00000630224 POTECB2RU33 542 aa8□□□□□ -1.13
TCF4-269ENST00000630224 POLRMTO00411 1230 aaKnown RBP8□□□□□ -1.13
TCF4-269ENST00000630224 DXOO77932 396 aaKnown RBP8□□□□□ -1.13
TCF4-269ENST00000630224 GJA5P36382 358 aa8□□□□□ -1.13
TCF4-269ENST00000630224 TMPOP42166 694 aaKnown RBP8□□□□□ -1.13
TCF4-269ENST00000630224 RPIAP49247 311 aa8□□□□□ -1.13
TCF4-269ENST00000630224 NEUROD2Q15784 382 aa8□□□□□ -1.13
TCF4-269ENST00000630224 NFE2L2Q16236 605 aa8□□□□□ -1.13
TCF4-269ENST00000630224 CCDC27Q2M243 656 aa8□□□□□ -1.13
TCF4-269ENST00000630224 USPL1Q5W0Q7 1092 aa8□□□□□ -1.13
TCF4-269ENST00000630224 Q6ZNB5 142 aa8□□□□□ -1.13
TCF4-269ENST00000630224 LIAT1Q6ZQX7 453 aa8□□□□□ -1.13
TCF4-269ENST00000630224 DDRGK1Q96HY6 314 aa8□□□□□ -1.13
TCF4-269ENST00000630224 KDM4CQ9H3R0 1056 aa8□□□□□ -1.13
TCF4-269ENST00000630224 ZBTB3Q9H5J0 574 aa8□□□□□ -1.13
TCF4-269ENST00000630224 RRP7AQ9Y3A4 280 aaKnown RBP8□□□□□ -1.13
TCF4-269ENST00000630224 NCAPD2Q15021 1401 aa8□□□□□ -1.13
TCF4-269ENST00000630224 DICER1Q9UPY3 1922 aaKnown RBP7.99□□□□□ -1.13
TCF4-269ENST00000630224 ERVV-2B6SEH9 535 aa7.99□□□□□ -1.13
TCF4-269ENST00000630224 NFKBIEO00221 500 aa7.99□□□□□ -1.13
TCF4-269ENST00000630224 KDM6AO15550 1401 aaPredicted RBP7.99□□□□□ -1.13
TCF4-269ENST00000630224 TM4SF1P30408 202 aa7.99□□□□□ -1.13
TCF4-269ENST00000630224 RIPK4P57078 832 aa7.99□□□□□ -1.13
TCF4-269ENST00000630224 CALD1Q05682 793 aaKnown RBP7.99□□□□□ -1.13
TCF4-269ENST00000630224 PLA2G2CQ5R387 149 aa7.99□□□□□ -1.13
TCF4-269ENST00000630224 ZNF530Q6P9A1 599 aaPredicted RBP7.99□□□□□ -1.13
TCF4-269ENST00000630224 C2CD5Q86YS7 1000 aa7.99□□□□□ -1.13
TCF4-269ENST00000630224 NFATC2IPQ8NCF5 419 aa7.99□□□□□ -1.13
TCF4-269ENST00000630224 GAS2L2Q8NHY3 880 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms