RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 LRFN2Q9ULH4 789 aa6.87□□□□□ -1.31
VPS8-228ENST00000628962 TRIM33Q9UPN9 1127 aa6.87□□□□□ -1.31
VPS8-228ENST00000628962 KCNMB2Q9Y691 235 aa6.87□□□□□ -1.31
VPS8-228ENST00000628962 FAM196BA6NMK8 535 aa6.86□□□□□ -1.31
VPS8-228ENST00000628962 USP17L15C9J2P7 530 aa6.86□□□□□ -1.31
VPS8-228ENST00000628962 USP17L10C9JJH3 530 aa6.86□□□□□ -1.31
VPS8-228ENST00000628962 USP17L13C9JLJ4 530 aa6.86□□□□□ -1.31
VPS8-228ENST00000628962 USP17L12C9JPN9 530 aa6.86□□□□□ -1.31
VPS8-228ENST00000628962 USP17L11C9JVI0 530 aa6.86□□□□□ -1.31
VPS8-228ENST00000628962 USP17L21D6R901 530 aa6.86□□□□□ -1.31
VPS8-228ENST00000628962 USP17L18D6R9N7 530 aa6.86□□□□□ -1.31
VPS8-228ENST00000628962 USP17L22D6RA61 530 aa6.86□□□□□ -1.31
VPS8-228ENST00000628962 USP17L17D6RBQ6 530 aa6.86□□□□□ -1.31
VPS8-228ENST00000628962 USP17L19D6RCP7 530 aa6.86□□□□□ -1.31
VPS8-228ENST00000628962 USP17L20D6RJB6 530 aa6.86□□□□□ -1.31
VPS8-228ENST00000628962 USP17L24Q0WX57 530 aa6.86□□□□□ -1.31
VPS8-228ENST00000628962 FLIIQ13045 1269 aa6.86□□□□□ -1.31
VPS8-228ENST00000628962 CMTR1Q8N1G2 835 aaKnown RBP6.86□□□□□ -1.31
VPS8-228ENST00000628962 GALNT11Q8NCW6 608 aa6.86□□□□□ -1.31
VPS8-228ENST00000628962 MUC3BQ9H195 1237 aa6.86□□□□□ -1.31
VPS8-228ENST00000628962 RBSNQ9H1K0 784 aa6.86□□□□□ -1.31
VPS8-228ENST00000628962 PPME1Q9Y570 386 aa6.86□□□□□ -1.31
VPS8-228ENST00000628962 DHX15O43143 795 aaKnown RBP6.85□□□□□ -1.31
VPS8-228ENST00000628962 NFIAQ12857 509 aa6.85□□□□□ -1.31
VPS8-228ENST00000628962 TREML1Q86YW5 311 aa6.85□□□□□ -1.31
VPS8-228ENST00000628962 RGL4Q8IZJ4 473 aa6.85□□□□□ -1.31
VPS8-228ENST00000628962 GLMNQ92990 594 aa6.85□□□□□ -1.31
VPS8-228ENST00000628962 ARXQ96QS3 562 aa6.85□□□□□ -1.31
VPS8-228ENST00000628962 RNF114Q9Y508 228 aa6.85□□□□□ -1.31
VPS8-228ENST00000628962 TM4SF5O14894 197 aa6.84□□□□□ -1.31
VPS8-228ENST00000628962 WISP1O95388 367 aa6.84□□□□□ -1.31
VPS8-228ENST00000628962 UVSSAQ2YD98 709 aa6.84□□□□□ -1.31
VPS8-228ENST00000628962 LCE1DQ5T752 114 aa6.84□□□□□ -1.31
VPS8-228ENST00000628962 INTS5Q6P9B9 1019 aaKnown RBP6.84□□□□□ -1.31
VPS8-228ENST00000628962 PRR19A6NJB7 356 aa6.83□□□□□ -1.32
VPS8-228ENST00000628962 DTX1Q86Y01 620 aa6.83□□□□□ -1.32
VPS8-228ENST00000628962 VTI1AQ96AJ9 217 aa6.83□□□□□ -1.32
VPS8-228ENST00000628962 KRTAP4-7Q9BYR0 210 aa6.83□□□□□ -1.32
VPS8-228ENST00000628962 CEP41Q9BYV8 373 aa6.83□□□□□ -1.32
VPS8-228ENST00000628962 C7orf69Q9H7B7 122 aa6.83□□□□□ -1.32
VPS8-228ENST00000628962 CD68P34810 354 aaPredicted RBP6.82□□□□□ -1.32
VPS8-228ENST00000628962 GRIK1P39086 918 aa6.82□□□□□ -1.32
VPS8-228ENST00000628962 RNF43Q68DV7 783 aa6.82□□□□□ -1.32
VPS8-228ENST00000628962 FNBP4Q8N3X1 1017 aaPredicted RBP6.82□□□□□ -1.32
VPS8-228ENST00000628962 FAM46AQ96IP4 442 aaKnown RBP6.82□□□□□ -1.32
VPS8-228ENST00000628962 PPP1R12CQ9BZL4 782 aa6.82□□□□□ -1.32
VPS8-228ENST00000628962 KCNK4Q9NYG8 393 aa6.82□□□□□ -1.32
VPS8-228ENST00000628962 LINC01387J3KSC0 135 aa6.81□□□□□ -1.32
VPS8-228ENST00000628962 ACAD11Q709F0 780 aa6.81□□□□□ -1.32
VPS8-228ENST00000628962 TRIM42Q8IWZ5 723 aa6.81□□□□□ -1.32
VPS8-228ENST00000628962 DBNDD2Q9BQY9 259 aa6.81□□□□□ -1.32
VPS8-228ENST00000628962 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.81□□□□□ -1.32
VPS8-228ENST00000628962 HMX2A2RU54 273 aa6.8□□□□□ -1.32
VPS8-228ENST00000628962 TRIP4Q15650 581 aaPredicted RBP6.8□□□□□ -1.32
VPS8-228ENST00000628962 COX20Q5RI15 118 aa6.8□□□□□ -1.32
VPS8-228ENST00000628962 KIAA1211Q6ZU35 1233 aa6.8□□□□□ -1.32
VPS8-228ENST00000628962 NLRP13Q86W25 1043 aa6.8□□□□□ -1.32
VPS8-228ENST00000628962 UTP4Q969X6 686 aaKnown RBP6.8□□□□□ -1.32
VPS8-228ENST00000628962 MYRFLQ96LU7 910 aa6.8□□□□□ -1.32
VPS8-228ENST00000628962 VRTNQ9H8Y1 702 aa6.8□□□□□ -1.32
VPS8-228ENST00000628962 FZD5Q13467 585 aa6.79□□□□□ -1.32
VPS8-228ENST00000628962 COL13A1Q5TAT6 717 aaPredicted RBP6.79□□□□□ -1.32
VPS8-228ENST00000628962 TXNDC11Q6PKC3 985 aa6.79□□□□□ -1.32
VPS8-228ENST00000628962 ADAMTSL4Q6UY14 1074 aa6.79□□□□□ -1.32
VPS8-228ENST00000628962 ETFBKMTQ8IXQ9 262 aa6.79□□□□□ -1.32
VPS8-228ENST00000628962 OR13H1Q8NG92 308 aa6.79□□□□□ -1.32
VPS8-228ENST00000628962 WNT11O96014 354 aa6.78□□□□□ -1.32
VPS8-228ENST00000628962 ATP11AP98196 1134 aa6.78□□□□□ -1.32
VPS8-228ENST00000628962 LACRTQ9GZZ8 138 aa6.78□□□□□ -1.32
VPS8-228ENST00000628962 ADGRE2Q9UHX3 823 aa6.78□□□□□ -1.32
VPS8-228ENST00000628962 CDC27P30260 824 aa6.77□□□□□ -1.33
VPS8-228ENST00000628962 FKBP5Q13451 457 aaPredicted RBP6.77□□□□□ -1.33
VPS8-228ENST00000628962 CLEC10AQ8IUN9 316 aa6.77□□□□□ -1.33
VPS8-228ENST00000628962 FAM20CQ8IXL6 584 aa6.77□□□□□ -1.33
VPS8-228ENST00000628962 KLHL23Q8NBE8 558 aa6.77□□□□□ -1.33
VPS8-228ENST00000628962 FAM83CQ9BQN1 747 aa6.77□□□□□ -1.33
VPS8-228ENST00000628962 CARD10Q9BWT7 1032 aa6.77□□□□□ -1.33
VPS8-228ENST00000628962 FSCN2O14926 492 aa6.76□□□□□ -1.33
VPS8-228ENST00000628962 SMNDC1O75940 238 aaKnown RBP eCLIP6.76□□□□□ -1.33
VPS8-228ENST00000628962 LMOD1P29536 600 aaPredicted RBP6.76□□□□□ -1.33
VPS8-228ENST00000628962 HYAL2Q12891 473 aa6.76□□□□□ -1.33
VPS8-228ENST00000628962 DUOXA2Q1HG44 320 aa6.76□□□□□ -1.33
VPS8-228ENST00000628962 CEP135Q66GS9 1140 aa6.76□□□□□ -1.33
VPS8-228ENST00000628962 SHKBP1Q8TBC3 707 aa6.76□□□□□ -1.33
VPS8-228ENST00000628962 FOXD4L4Q8WXT5 416 aaPredicted RBP6.76□□□□□ -1.33
VPS8-228ENST00000628962 ADAM11O75078 769 aa6.75□□□□□ -1.33
VPS8-228ENST00000628962 KIF4AO95239 1232 aa6.75□□□□□ -1.33
VPS8-228ENST00000628962 FAM26DQ5JW98 314 aa6.75□□□□□ -1.33
VPS8-228ENST00000628962 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.75□□□□□ -1.33
VPS8-228ENST00000628962 PROSER2Q86WR7 435 aaPredicted RBP6.75□□□□□ -1.33
VPS8-228ENST00000628962 CLUAP1Q96AJ1 413 aa6.75□□□□□ -1.33
VPS8-228ENST00000628962 SPACA7Q96KW9 195 aa6.75□□□□□ -1.33
VPS8-228ENST00000628962 RASSF4Q9H2L5 321 aa6.75□□□□□ -1.33
VPS8-228ENST00000628962 DDX3YO15523 660 aaKnown RBP6.74□□□□□ -1.33
VPS8-228ENST00000628962 EPHA1P21709 976 aa6.74□□□□□ -1.33
VPS8-228ENST00000628962 BRD2P25440 801 aaKnown RBP6.74□□□□□ -1.33
VPS8-228ENST00000628962 CDC25BP30305 580 aa6.74□□□□□ -1.33
VPS8-228ENST00000628962 FAM200AQ8TCP9 573 aa6.74□□□□□ -1.33
VPS8-228ENST00000628962 UBASH3BQ8TF42 649 aa6.74□□□□□ -1.33
VPS8-228ENST00000628962 CALR3Q96L12 384 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms