RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 ZNF646O15015 1829 aaPredicted RBP8.43□□□□□ -1.06
LINC00649-220ENST00000628906 PSMD14O00487 310 aa8.42□□□□□ -1.06
LINC00649-220ENST00000628906 RGL2O15211 777 aa8.42□□□□□ -1.06
LINC00649-220ENST00000628906 PPM1GO15355 546 aaPredicted RBP8.42□□□□□ -1.06
LINC00649-220ENST00000628906 PTPN12Q05209 780 aaKnown RBP8.42□□□□□ -1.06
LINC00649-220ENST00000628906 TCIRG1Q13488 830 aa8.42□□□□□ -1.06
LINC00649-220ENST00000628906 KIF4BQ2VIQ3 1234 aa8.42□□□□□ -1.06
LINC00649-220ENST00000628906 LDLRAD1Q5T700 205 aa8.42□□□□□ -1.06
LINC00649-220ENST00000628906 DZIP3Q86Y13 1208 aaKnown RBP8.42□□□□□ -1.06
LINC00649-220ENST00000628906 HCN4Q9Y3Q4 1203 aa8.42□□□□□ -1.06
LINC00649-220ENST00000628906 ZNF330Q9Y3S2 320 aaPredicted RBP8.42□□□□□ -1.06
LINC00649-220ENST00000628906 ATP6V0A2Q9Y487 856 aa8.42□□□□□ -1.06
LINC00649-220ENST00000628906 TCERG1O14776 1098 aaKnown RBP8.41□□□□□ -1.06
LINC00649-220ENST00000628906 EIF4A2Q14240 407 aaKnown RBP8.41□□□□□ -1.06
LINC00649-220ENST00000628906 ANGEL2Q5VTE6 544 aaKnown RBP8.41□□□□□ -1.06
LINC00649-220ENST00000628906 NPM2Q86SE8 214 aaKnown RBP8.41□□□□□ -1.06
LINC00649-220ENST00000628906 ZNF496Q96IT1 587 aaPredicted RBP8.41□□□□□ -1.06
LINC00649-220ENST00000628906 FAM161BQ96MY7 647 aa8.41□□□□□ -1.06
LINC00649-220ENST00000628906 LGR6Q9HBX8 967 aa8.41□□□□□ -1.06
LINC00649-220ENST00000628906 FARP2O94887 1054 aaPredicted RBP8.4□□□□□ -1.06
LINC00649-220ENST00000628906 CAPN2P17655 700 aa8.4□□□□□ -1.06
LINC00649-220ENST00000628906 SCARF1Q14162 830 aa8.4□□□□□ -1.06
LINC00649-220ENST00000628906 OTUD7BQ6GQQ9 843 aa8.4□□□□□ -1.06
LINC00649-220ENST00000628906 NECTIN2Q92692 538 aa8.4□□□□□ -1.06
LINC00649-220ENST00000628906 RPGRQ92834 1020 aaKnown RBP8.4□□□□□ -1.06
LINC00649-220ENST00000628906 TMX4Q9H1E5 349 aaPredicted RBP8.4□□□□□ -1.06
LINC00649-220ENST00000628906 NIP7Q9Y221 180 aaKnown RBP eCLIP8.4□□□□□ -1.06
LINC00649-220ENST00000628906 ZNF652Q9Y2D9 606 aa8.4□□□□□ -1.06
LINC00649-220ENST00000628906 RIC1Q4ADV7 1423 aa8.39□□□□□ -1.07
LINC00649-220ENST00000628906 ROCK2O75116 1388 aaKnown RBP8.39□□□□□ -1.07
LINC00649-220ENST00000628906 A1BGP04217 495 aa8.39□□□□□ -1.07
LINC00649-220ENST00000628906 ZBTB48P10074 688 aaPredicted RBP8.39□□□□□ -1.07
LINC00649-220ENST00000628906 GTF2E1P29083 439 aaPredicted RBP8.39□□□□□ -1.07
LINC00649-220ENST00000628906 MAGEA10P43363 369 aaPredicted RBP8.39□□□□□ -1.07
LINC00649-220ENST00000628906 TTLL12Q14166 644 aaPredicted RBP8.39□□□□□ -1.07
LINC00649-220ENST00000628906 RBM17Q96I25 401 aaKnown RBP8.39□□□□□ -1.07
LINC00649-220ENST00000628906 TESPA1A2RU30 521 aaPredicted RBP8.38□□□□□ -1.07
LINC00649-220ENST00000628906 FAM177BA6PVY3 158 aa8.38□□□□□ -1.07
LINC00649-220ENST00000628906 GNRH1P01148 92 aa8.38□□□□□ -1.07
LINC00649-220ENST00000628906 MRE11P49959 708 aa8.38□□□□□ -1.07
LINC00649-220ENST00000628906 PRMT2P55345 433 aa8.38□□□□□ -1.07
LINC00649-220ENST00000628906 MKRN4PQ13434 485 aaPredicted RBP8.38□□□□□ -1.07
LINC00649-220ENST00000628906 ZNF697Q5TEC3 545 aa8.38□□□□□ -1.07
LINC00649-220ENST00000628906 PRAMEF18Q5VWM3 479 aa8.38□□□□□ -1.07
LINC00649-220ENST00000628906 DPP8Q6V1X1 898 aaPredicted RBP8.38□□□□□ -1.07
LINC00649-220ENST00000628906 U2AF1L4Q8WU68 220 aaKnown RBP8.38□□□□□ -1.07
LINC00649-220ENST00000628906 COL26A1Q96A83 441 aa8.38□□□□□ -1.07
LINC00649-220ENST00000628906 PTPN18Q99952 460 aa8.38□□□□□ -1.07
LINC00649-220ENST00000628906 LRFN3Q9BTN0 628 aa8.38□□□□□ -1.07
LINC00649-220ENST00000628906 UBE2OQ9C0C9 1292 aaKnown RBP8.38□□□□□ -1.07
LINC00649-220ENST00000628906 SEMA6BQ9H3T3 888 aa8.38□□□□□ -1.07
LINC00649-220ENST00000628906 POLKQ9UBT6 870 aa8.38□□□□□ -1.07
LINC00649-220ENST00000628906 RNMTO43148 476 aaKnown RBP8.37□□□□□ -1.07
LINC00649-220ENST00000628906 SGPL1O95470 568 aa8.37□□□□□ -1.07
LINC00649-220ENST00000628906 CCL5P13501 91 aa8.37□□□□□ -1.07
LINC00649-220ENST00000628906 ZNF280AP59817 542 aaPredicted RBP8.37□□□□□ -1.07
LINC00649-220ENST00000628906 FOXK2Q01167 660 aa8.37□□□□□ -1.07
LINC00649-220ENST00000628906 ARMC9Q7Z3E5 817 aa8.37□□□□□ -1.07
LINC00649-220ENST00000628906 SP8Q8IXZ3 490 aa8.37□□□□□ -1.07
LINC00649-220ENST00000628906 SLC10A4Q96EP9 437 aa8.37□□□□□ -1.07
LINC00649-220ENST00000628906 RNF208Q9H0X6 261 aa8.37□□□□□ -1.07
LINC00649-220ENST00000628906 ZMYND8Q9ULU4 1186 aaPredicted RBP8.37□□□□□ -1.07
LINC00649-220ENST00000628906 COL2A1P02458 1487 aaPredicted RBP8.37□□□□□ -1.07
LINC00649-220ENST00000628906 SSC5DA1L4H1 1573 aa8.36□□□□□ -1.07
LINC00649-220ENST00000628906 VIL1P09327 827 aaKnown RBP8.36□□□□□ -1.07
LINC00649-220ENST00000628906 NF2P35240 595 aa8.36□□□□□ -1.07
LINC00649-220ENST00000628906 NYXQ9GZU5 481 aa8.36□□□□□ -1.07
LINC00649-220ENST00000628906 KCNQ5Q9NR82 932 aa8.36□□□□□ -1.07
LINC00649-220ENST00000628906 ABCC12Q96J65 1359 aa8.35□□□□□ -1.07
LINC00649-220ENST00000628906 HEG1Q9ULI3 1381 aa8.35□□□□□ -1.07
LINC00649-220ENST00000628906 CHD8Q9HCK8 2581 aa8.35□□□□□ -1.07
LINC00649-220ENST00000628906 BBOX1O75936 387 aa8.35□□□□□ -1.07
LINC00649-220ENST00000628906 TNNT2P45379 298 aaPredicted RBP8.35□□□□□ -1.07
LINC00649-220ENST00000628906 NUTM1Q86Y26 1132 aa8.35□□□□□ -1.07
LINC00649-220ENST00000628906 ATXN2LQ8WWM7 1075 aaKnown RBP8.35□□□□□ -1.07
LINC00649-220ENST00000628906 MYLIPQ8WY64 445 aa8.35□□□□□ -1.07
LINC00649-220ENST00000628906 ZDBF2Q9HCK1 2354 aa8.35□□□□□ -1.07
LINC00649-220ENST00000628906 RTL9Q8NET4 1388 aa8.35□□□□□ -1.07
LINC00649-220ENST00000628906 UNCXA6NJT0 531 aa8.34□□□□□ -1.07
LINC00649-220ENST00000628906 GRK4P32298 578 aa8.34□□□□□ -1.07
LINC00649-220ENST00000628906 MAP3K11Q16584 847 aa8.34□□□□□ -1.07
LINC00649-220ENST00000628906 TTC5Q8N0Z6 440 aa8.34□□□□□ -1.07
LINC00649-220ENST00000628906 ADAMTS19Q8TE59 1207 aa8.34□□□□□ -1.07
LINC00649-220ENST00000628906 L3MBTL2Q969R5 705 aa8.34□□□□□ -1.07
LINC00649-220ENST00000628906 WNK4Q96J92 1243 aa8.34□□□□□ -1.07
LINC00649-220ENST00000628906 UHRF1Q96T88 793 aaPredicted RBP8.34□□□□□ -1.07
LINC00649-220ENST00000628906 SCAF8Q9UPN6 1271 aaKnown RBP8.34□□□□□ -1.07
LINC00649-220ENST00000628906 UBR2Q8IWV8 1755 aa8.34□□□□□ -1.07
LINC00649-220ENST00000628906 ALPK3Q96L96 1907 aa8.34□□□□□ -1.07
LINC00649-220ENST00000628906 FAM205AQ6ZU69 1335 aa8.33□□□□□ -1.08
LINC00649-220ENST00000628906 LAMB1P07942 1786 aa8.33□□□□□ -1.08
LINC00649-220ENST00000628906 SYN1P17600 705 aa8.33□□□□□ -1.08
LINC00649-220ENST00000628906 TAF1P21675 1872 aa8.33□□□□□ -1.08
LINC00649-220ENST00000628906 WASHC4Q2M389 1173 aa8.33□□□□□ -1.08
LINC00649-220ENST00000628906 AEBP1Q8IUX7 1158 aa8.33□□□□□ -1.08
LINC00649-220ENST00000628906 C7orf61Q8IZ16 206 aa8.33□□□□□ -1.08
LINC00649-220ENST00000628906 PAWRQ96IZ0 340 aaKnown RBP8.33□□□□□ -1.08
LINC00649-220ENST00000628906 ASB2Q96Q27 587 aa8.33□□□□□ -1.08
LINC00649-220ENST00000628906 ARHGAP39Q9C0H5 1083 aa8.33□□□□□ -1.08
LINC00649-220ENST00000628906 DBNDD1Q9H9R9 158 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms