RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 CNTROBQ8N137 903 aa12.39□□□□□ -0.43
FOXCUT-201ENST00000628509 BRIP1Q9BX63 1249 aa12.39□□□□□ -0.43
FOXCUT-201ENST00000628509 IL1RAPL2Q9NP60 686 aa12.39□□□□□ -0.43
FOXCUT-201ENST00000628509 DDX60Q8IY21 1712 aaKnown RBP12.39□□□□□ -0.43
FOXCUT-201ENST00000628509 IFIT1P09914 478 aaKnown RBP12.38□□□□□ -0.43
FOXCUT-201ENST00000628509 ALDH1B1P30837 517 aa12.38□□□□□ -0.43
FOXCUT-201ENST00000628509 TNNI3KQ59H18 835 aa12.38□□□□□ -0.43
FOXCUT-201ENST00000628509 TTC22Q5TAA0 569 aa12.38□□□□□ -0.43
FOXCUT-201ENST00000628509 BCL11AQ9H165 835 aa12.38□□□□□ -0.43
FOXCUT-201ENST00000628509 BSDC1Q9NW68 430 aaPredicted RBP12.38□□□□□ -0.43
FOXCUT-201ENST00000628509 FPGT-TNNI3KV9GXZ4 949 aa12.38□□□□□ -0.43
FOXCUT-201ENST00000628509 ABCC12Q96J65 1359 aa12.38□□□□□ -0.43
FOXCUT-201ENST00000628509 POLRMTO00411 1230 aaKnown RBP12.37□□□□□ -0.43
FOXCUT-201ENST00000628509 SMARCA5O60264 1052 aaPredicted RBP12.37□□□□□ -0.43
FOXCUT-201ENST00000628509 BBOX1O75936 387 aa12.37□□□□□ -0.43
FOXCUT-201ENST00000628509 SASH1O94885 1247 aa12.37□□□□□ -0.43
FOXCUT-201ENST00000628509 SLC5A1P13866 664 aa12.37□□□□□ -0.43
FOXCUT-201ENST00000628509 POLD1P28340 1107 aa12.37□□□□□ -0.43
FOXCUT-201ENST00000628509 RPS8P62241 208 aaKnown RBP12.37□□□□□ -0.43
FOXCUT-201ENST00000628509 TFCP2Q12800 502 aa12.37□□□□□ -0.43
FOXCUT-201ENST00000628509 PUM3Q15397 648 aaKnown RBP12.37□□□□□ -0.43
FOXCUT-201ENST00000628509 PRR5LQ6MZQ0 368 aa12.37□□□□□ -0.43
FOXCUT-201ENST00000628509 DEFB132Q7Z7B7 95 aa12.37□□□□□ -0.43
FOXCUT-201ENST00000628509 NEUROD6Q96NK8 337 aa12.37□□□□□ -0.43
FOXCUT-201ENST00000628509 TRIM6-TRIM34B2RNG4 842 aa12.36□□□□□ -0.43
FOXCUT-201ENST00000628509 CDC45O75419 566 aa12.36□□□□□ -0.43
FOXCUT-201ENST00000628509 PDE8BO95263 885 aa12.36□□□□□ -0.43
FOXCUT-201ENST00000628509 MMP10P09238 476 aa12.36□□□□□ -0.43
FOXCUT-201ENST00000628509 PDE4AP27815 886 aa12.36□□□□□ -0.43
FOXCUT-201ENST00000628509 KCNJ4P48050 445 aa12.36□□□□□ -0.43
FOXCUT-201ENST00000628509 GRAPQ13588 217 aa12.36□□□□□ -0.43
FOXCUT-201ENST00000628509 ATP2B3Q16720 1220 aa12.36□□□□□ -0.43
FOXCUT-201ENST00000628509 GRAPLQ8TC17 118 aaPredicted RBP12.36□□□□□ -0.43
FOXCUT-201ENST00000628509 LPIN2Q92539 896 aa12.36□□□□□ -0.43
FOXCUT-201ENST00000628509 CCDC85AQ96PX6 553 aaPredicted RBP12.36□□□□□ -0.43
FOXCUT-201ENST00000628509 GNL3LQ9NVN8 582 aaKnown RBP12.36□□□□□ -0.43
FOXCUT-201ENST00000628509 TUBGCP6Q96RT7 1819 aa12.36□□□□□ -0.43
FOXCUT-201ENST00000628509 UQCRFS1P1P0C7P4 283 aa12.35□□□□□ -0.43
FOXCUT-201ENST00000628509 GRIPAP1Q4V328 841 aa12.35□□□□□ -0.43
FOXCUT-201ENST00000628509 ATG9AQ7Z3C6 839 aa12.35□□□□□ -0.43
FOXCUT-201ENST00000628509 SYNE4Q8N205 404 aa12.35□□□□□ -0.43
FOXCUT-201ENST00000628509 KLHDC4Q8TBB5 520 aa12.35□□□□□ -0.43
FOXCUT-201ENST00000628509 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.35□□□□□ -0.43
FOXCUT-201ENST00000628509 RUFY2Q8WXA3 655 aa12.35□□□□□ -0.43
FOXCUT-201ENST00000628509 EVI5LQ96CN4 794 aa12.35□□□□□ -0.43
FOXCUT-201ENST00000628509 CRAMP1Q96RY5 1269 aa12.35□□□□□ -0.43
FOXCUT-201ENST00000628509 RIPOR2Q9Y4F9 1068 aa12.35□□□□□ -0.43
FOXCUT-201ENST00000628509 A0A1B0GUL7 405 aa12.34□□□□□ -0.43
FOXCUT-201ENST00000628509 H0YIN7 160 aa12.34□□□□□ -0.43
FOXCUT-201ENST00000628509 NPR1P16066 1061 aa12.34□□□□□ -0.43
FOXCUT-201ENST00000628509 ATP5JP18859 108 aa12.34□□□□□ -0.43
FOXCUT-201ENST00000628509 UBE4AQ14139 1066 aa12.34□□□□□ -0.43
FOXCUT-201ENST00000628509 CRY2Q49AN0 593 aa12.34□□□□□ -0.43
FOXCUT-201ENST00000628509 CAVIN4Q5BKX8 364 aa12.34□□□□□ -0.43
FOXCUT-201ENST00000628509 TTC39AQ5SRH9 613 aa12.34□□□□□ -0.43
FOXCUT-201ENST00000628509 AMIGO3Q86WK7 504 aa12.34□□□□□ -0.43
FOXCUT-201ENST00000628509 SPDYE1Q8NFV5 336 aaPredicted RBP12.34□□□□□ -0.43
FOXCUT-201ENST00000628509 EAF2Q96CJ1 260 aaPredicted RBP12.34□□□□□ -0.43
FOXCUT-201ENST00000628509 ZNF594Q96JF6 807 aaPredicted RBP12.34□□□□□ -0.43
FOXCUT-201ENST00000628509 CLEC11AQ9Y240 323 aa12.34□□□□□ -0.43
FOXCUT-201ENST00000628509 LRP5O75197 1615 aa12.33□□□□□ -0.43
FOXCUT-201ENST00000628509 IGSF3O75054 1194 aa12.33□□□□□ -0.44
FOXCUT-201ENST00000628509 REC8O95072 547 aa12.33□□□□□ -0.44
FOXCUT-201ENST00000628509 HOXA10P31260 410 aaPredicted RBP12.33□□□□□ -0.44
FOXCUT-201ENST00000628509 TTF1Q15361 905 aaPredicted RBP12.33□□□□□ -0.44
FOXCUT-201ENST00000628509 LRRC24Q50LG9 513 aa12.33□□□□□ -0.44
FOXCUT-201ENST00000628509 SMIM5Q71RC9 77 aa12.33□□□□□ -0.44
FOXCUT-201ENST00000628509 C16orf71Q8IYS4 520 aaPredicted RBP12.33□□□□□ -0.44
FOXCUT-201ENST00000628509 UPF1Q92900 1129 aaKnown RBP eCLIP12.33□□□□□ -0.44
FOXCUT-201ENST00000628509 CNKSR1Q969H4 720 aa12.33□□□□□ -0.44
FOXCUT-201ENST00000628509 RILPL2Q969X0 211 aa12.33□□□□□ -0.44
FOXCUT-201ENST00000628509 MASTLQ96GX5 879 aa12.33□□□□□ -0.44
FOXCUT-201ENST00000628509 BACH2Q9BYV9 841 aa12.33□□□□□ -0.44
FOXCUT-201ENST00000628509 ANO8Q9HCE9 1232 aaPredicted RBP12.33□□□□□ -0.44
FOXCUT-201ENST00000628509 ZNF609O15014 1411 aa12.33□□□□□ -0.44
FOXCUT-201ENST00000628509 NRXN2Q9P2S2 1712 aa12.33□□□□□ -0.44
FOXCUT-201ENST00000628509 SALL3Q9BXA9 1300 aa12.33□□□□□ -0.44
FOXCUT-201ENST00000628509 KLRG2A4D1S0 409 aaPredicted RBP12.32□□□□□ -0.44
FOXCUT-201ENST00000628509 DDR1Q08345 913 aa12.32□□□□□ -0.44
FOXCUT-201ENST00000628509 ZSCAN25Q6NSZ9 544 aa12.32□□□□□ -0.44
FOXCUT-201ENST00000628509 VPS37DQ86XT2 251 aa12.32□□□□□ -0.44
FOXCUT-201ENST00000628509 ZNF512BQ96KM6 892 aaPredicted RBP12.32□□□□□ -0.44
FOXCUT-201ENST00000628509 MTFR1LQ9H019 292 aa12.32□□□□□ -0.44
FOXCUT-201ENST00000628509 CCDC8Q9H0W5 538 aaPredicted RBP12.32□□□□□ -0.44
FOXCUT-201ENST00000628509 LEMD3Q9Y2U8 911 aa12.32□□□□□ -0.44
FOXCUT-201ENST00000628509 RFX7Q2KHR2 1363 aa12.31□□□□□ -0.44
FOXCUT-201ENST00000628509 EPB41L2O43491 1005 aaKnown RBP12.31□□□□□ -0.44
FOXCUT-201ENST00000628509 CHRNDQ07001 517 aa12.31□□□□□ -0.44
FOXCUT-201ENST00000628509 CC2D2BQ6DHV5 1058 aa12.31□□□□□ -0.44
FOXCUT-201ENST00000628509 STYK1Q6J9G0 422 aa12.31□□□□□ -0.44
FOXCUT-201ENST00000628509 TMED8Q6PL24 325 aaPredicted RBP12.31□□□□□ -0.44
FOXCUT-201ENST00000628509 IL27Q8NEV9 243 aa12.31□□□□□ -0.44
FOXCUT-201ENST00000628509 PUS3Q9BZE2 481 aaKnown RBP12.31□□□□□ -0.44
FOXCUT-201ENST00000628509 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.31□□□□□ -0.44
FOXCUT-201ENST00000628509 SEC31BQ9NQW1 1179 aa12.31□□□□□ -0.44
FOXCUT-201ENST00000628509 ANKIB1Q9P2G1 1089 aa12.31□□□□□ -0.44
FOXCUT-201ENST00000628509 SPEF2Q9C093 1822 aa12.31□□□□□ -0.44
FOXCUT-201ENST00000628509 XDHP47989 1333 aa12.31□□□□□ -0.44
FOXCUT-201ENST00000628509 AK9Q5TCS8 1911 aa12.31□□□□□ -0.44
FOXCUT-201ENST00000628509 SEMA3EO15041 775 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms