RNA–Protein interactions for RNA: ENST00000628176.2

MECP2-217, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3 BASIC

Gene MECP2, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-217ENST00000628176 CSF1RP07333 972 aa17.26■□□□□ 0.35
MECP2-217ENST00000628176 HSP90B1P14625 803 aaKnown RBP17.26■□□□□ 0.35
MECP2-217ENST00000628176 SPRYD3Q8NCJ5 442 aa17.26■□□□□ 0.35
MECP2-217ENST00000628176 CACNA1SQ13698 1873 aa17.25■□□□□ 0.35
MECP2-217ENST00000628176 ATP8B2P98198 1209 aa17.25■□□□□ 0.35
MECP2-217ENST00000628176 RABL6Q3YEC7 729 aaPredicted RBP17.25■□□□□ 0.35
MECP2-217ENST00000628176 PA2G4Q9UQ80 394 aaKnown RBP17.25■□□□□ 0.35
MECP2-217ENST00000628176 SPEF2Q9C093 1822 aa17.25■□□□□ 0.35
MECP2-217ENST00000628176 SRGAP3O43295 1099 aa17.24■□□□□ 0.35
MECP2-217ENST00000628176 C2CD5Q86YS7 1000 aa17.24■□□□□ 0.35
MECP2-217ENST00000628176 NLGN2Q8NFZ4 835 aa17.24■□□□□ 0.35
MECP2-217ENST00000628176 OSBPL3Q9H4L5 887 aa17.24■□□□□ 0.35
MECP2-217ENST00000628176 KIF13BQ9NQT8 1826 aa17.24■□□□□ 0.35
MECP2-217ENST00000628176 DPEP1P16444 411 aa17.24■□□□□ 0.35
MECP2-217ENST00000628176 ITGA6P23229 1130 aa17.24■□□□□ 0.35
MECP2-217ENST00000628176 MTX1Q13505 466 aa17.24■□□□□ 0.35
MECP2-217ENST00000628176 SF3B3Q15393 1217 aaKnown RBP17.24■□□□□ 0.35
MECP2-217ENST00000628176 CELF1Q92879 486 aaKnown RBP17.24■□□□□ 0.35
MECP2-217ENST00000628176 KLRG2A4D1S0 409 aaPredicted RBP17.23■□□□□ 0.35
MECP2-217ENST00000628176 RFX5P48382 616 aaPredicted RBP17.23■□□□□ 0.35
MECP2-217ENST00000628176 ZNF622Q969S3 477 aaKnown RBP eCLIP17.23■□□□□ 0.356e-14■□□□□ 8.7
MECP2-217ENST00000628176 SRGNP10124 158 aa17.22■□□□□ 0.35
MECP2-217ENST00000628176 PDE6BP35913 854 aa17.22■□□□□ 0.35
MECP2-217ENST00000628176 CRY2Q49AN0 593 aa17.22■□□□□ 0.35
MECP2-217ENST00000628176 CCDC152Q4G0S7 254 aa17.22■□□□□ 0.35
MECP2-217ENST00000628176 CASC1Q6TDU7 716 aa17.22■□□□□ 0.35
MECP2-217ENST00000628176 USP26Q9BXU7 913 aa17.22■□□□□ 0.35
MECP2-217ENST00000628176 FHDC1Q9C0D6 1143 aaPredicted RBP17.22■□□□□ 0.35
MECP2-217ENST00000628176 SIL1Q9H173 461 aa17.22■□□□□ 0.35
MECP2-217ENST00000628176 KIAA1551Q9HCM1 1747 aa17.22■□□□□ 0.35
MECP2-217ENST00000628176 KCNA3P22001 575 aa17.21■□□□□ 0.35
MECP2-217ENST00000628176 RPGRQ92834 1020 aaKnown RBP17.21■□□□□ 0.35
MECP2-217ENST00000628176 PUS3Q9BZE2 481 aaKnown RBP17.21■□□□□ 0.35
MECP2-217ENST00000628176 H0YIN7 160 aa17.21■□□□□ 0.35
MECP2-217ENST00000628176 OLFM4Q6UX06 510 aa17.21■□□□□ 0.35
MECP2-217ENST00000628176 SSH3Q8TE77 659 aa17.21■□□□□ 0.35
MECP2-217ENST00000628176 ZNF219Q9P2Y4 722 aaPredicted RBP17.21■□□□□ 0.35
MECP2-217ENST00000628176 RIC1Q4ADV7 1423 aa17.2■□□□□ 0.34
MECP2-217ENST00000628176 CD2BP2O95400 341 aaKnown RBP17.2■□□□□ 0.34
MECP2-217ENST00000628176 PTPN12Q05209 780 aaKnown RBP17.2■□□□□ 0.34
MECP2-217ENST00000628176 IFIT5Q13325 482 aaKnown RBP17.2■□□□□ 0.34
MECP2-217ENST00000628176 POLA2Q14181 598 aa17.2■□□□□ 0.34
MECP2-217ENST00000628176 CCDC57Q2TAC2 916 aa17.2■□□□□ 0.34
MECP2-217ENST00000628176 DDX46Q7L014 1031 aaKnown RBP17.2■□□□□ 0.34
MECP2-217ENST00000628176 CWC22Q9HCG8 908 aaKnown RBP17.2■□□□□ 0.34
MECP2-217ENST00000628176 SLX4Q8IY92 1834 aa17.2■□□□□ 0.34
MECP2-217ENST00000628176 GOLGA6L22H0YM25 854 aa17.19■□□□□ 0.34
MECP2-217ENST00000628176 HSP90AA1P07900 732 aaKnown RBP17.19■□□□□ 0.34
MECP2-217ENST00000628176 NUCB2P80303 420 aa17.19■□□□□ 0.34
MECP2-217ENST00000628176 LRRC24Q50LG9 513 aa17.19■□□□□ 0.34
MECP2-217ENST00000628176 GRPEL1Q9HAV7 217 aa17.19■□□□□ 0.34
MECP2-217ENST00000628176 ANKRD18BA2A2Z9 1011 aa17.18■□□□□ 0.34
MECP2-217ENST00000628176 APBB1O00213 710 aa17.18■□□□□ 0.34
MECP2-217ENST00000628176 REC8O95072 547 aa17.18■□□□□ 0.34
MECP2-217ENST00000628176 MASTLQ96GX5 879 aa17.18■□□□□ 0.34
MECP2-217ENST00000628176 RBM17Q96I25 401 aaKnown RBP17.18■□□□□ 0.34
MECP2-217ENST00000628176 EXOC6BQ9Y2D4 811 aa17.18■□□□□ 0.34
MECP2-217ENST00000628176 NPR1P16066 1061 aa17.18■□□□□ 0.34
MECP2-217ENST00000628176 CD2APQ9Y5K6 639 aa17.18■□□□□ 0.34
MECP2-217ENST00000628176 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.18■□□□□ 0.34
MECP2-217ENST00000628176 HOXA10P31260 410 aaPredicted RBP17.17■□□□□ 0.34
MECP2-217ENST00000628176 TAF7LQ5H9L4 462 aa17.17■□□□□ 0.34
MECP2-217ENST00000628176 SYT17Q9BSW7 474 aa17.17■□□□□ 0.34
MECP2-217ENST00000628176 DLEC1Q9Y238 1755 aa17.16■□□□□ 0.34
MECP2-217ENST00000628176 WTIPA6NIX2 430 aaPredicted RBP17.16■□□□□ 0.34
MECP2-217ENST00000628176 SURF6O75683 361 aaKnown RBP17.16■□□□□ 0.34
MECP2-217ENST00000628176 CYP2E1P05181 493 aaPredicted RBP17.16■□□□□ 0.34
MECP2-217ENST00000628176 SDSP20132 328 aa17.16■□□□□ 0.34
MECP2-217ENST00000628176 RPS8P62241 208 aaKnown RBP17.16■□□□□ 0.34
MECP2-217ENST00000628176 GRAPQ13588 217 aa17.16■□□□□ 0.34
MECP2-217ENST00000628176 HELBQ8NG08 1087 aaPredicted RBP17.16■□□□□ 0.34
MECP2-217ENST00000628176 GRAPLQ8TC17 118 aaPredicted RBP17.16■□□□□ 0.34
MECP2-217ENST00000628176 EPB41L2O43491 1005 aaKnown RBP17.16■□□□□ 0.34
MECP2-217ENST00000628176 TGFB2P61812 414 aa17.16■□□□□ 0.34
MECP2-217ENST00000628176 KLHL40Q2TBA0 621 aa17.16■□□□□ 0.34
MECP2-217ENST00000628176 HSP90AB4PQ58FF6 505 aa17.16■□□□□ 0.34
MECP2-217ENST00000628176 ANKRD18AQ8IVF6 992 aa17.16■□□□□ 0.34
MECP2-217ENST00000628176 IL17RAQ96F46 866 aa17.16■□□□□ 0.34
MECP2-217ENST00000628176 GZF1Q9H116 711 aaPredicted RBP17.16■□□□□ 0.34
MECP2-217ENST00000628176 RTL9Q8NET4 1388 aa17.15■□□□□ 0.34
MECP2-217ENST00000628176 BRCA1P38398 1863 aaKnown RBP17.15■□□□□ 0.34
MECP2-217ENST00000628176 SNAP23O00161 211 aa17.15■□□□□ 0.34
MECP2-217ENST00000628176 CLCN1P35523 988 aa17.15■□□□□ 0.34
MECP2-217ENST00000628176 PRPF40BQ6NWY9 871 aaKnown RBP17.15■□□□□ 0.34
MECP2-217ENST00000628176 LDHAL6AQ6ZMR3 332 aa17.15■□□□□ 0.34
MECP2-217ENST00000628176 CRAMP1Q96RY5 1269 aa17.15■□□□□ 0.34
MECP2-217ENST00000628176 ST18O60284 1047 aa17.14■□□□□ 0.33
MECP2-217ENST00000628176 STYK1Q6J9G0 422 aa17.14■□□□□ 0.33
MECP2-217ENST00000628176 ATG9AQ7Z3C6 839 aa17.14■□□□□ 0.33
MECP2-217ENST00000628176 MPHOSPH8Q99549 860 aa17.14■□□□□ 0.33
MECP2-217ENST00000628176 COPRSQ9NQ92 184 aa17.14■□□□□ 0.33
MECP2-217ENST00000628176 SALL3Q9BXA9 1300 aa17.13■□□□□ 0.33
MECP2-217ENST00000628176 ERC2O15083 957 aa17.13■□□□□ 0.33
MECP2-217ENST00000628176 IGHMBP2P38935 993 aaKnown RBP17.13■□□□□ 0.33
MECP2-217ENST00000628176 C16orf71Q8IYS4 520 aaPredicted RBP17.13■□□□□ 0.33
MECP2-217ENST00000628176 CDC5LQ99459 802 aaKnown RBP17.13■□□□□ 0.33
MECP2-217ENST00000628176 RRAGDQ9NQL2 400 aaPredicted RBP17.13■□□□□ 0.33
MECP2-217ENST00000628176 CNNM1Q9NRU3 951 aa17.13■□□□□ 0.33
MECP2-217ENST00000628176 EYA2O00167 538 aa17.13■□□□□ 0.33
MECP2-217ENST00000628176 PPEF1O14829 653 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms