RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 CEP126Q9P2H0 1117 aa9.22□□□□□ -0.93
PTP4A1-206ENST00000627002 FPGT-TNNI3KV9GXZ4 949 aa9.22□□□□□ -0.93
PTP4A1-206ENST00000627002 RGPD3A6NKT7 1758 aaPredicted RBP9.22□□□□□ -0.93
PTP4A1-206ENST00000627002 RGPD4Q7Z3J3 1758 aa9.22□□□□□ -0.93
PTP4A1-206ENST00000627002 TRIM6-TRIM34B2RNG4 842 aa9.21□□□□□ -0.94
PTP4A1-206ENST00000627002 NPHP1O15259 732 aa9.21□□□□□ -0.94
PTP4A1-206ENST00000627002 GYS1P13807 737 aa9.21□□□□□ -0.94
PTP4A1-206ENST00000627002 ANP32AP39687 249 aaKnown RBP9.21□□□□□ -0.94
PTP4A1-206ENST00000627002 SF3B3Q15393 1217 aaKnown RBP9.21□□□□□ -0.94
PTP4A1-206ENST00000627002 LRRC24Q50LG9 513 aa9.21□□□□□ -0.94
PTP4A1-206ENST00000627002 TBC1D9Q6ZT07 1266 aa9.21□□□□□ -0.94
PTP4A1-206ENST00000627002 CNTROBQ8N137 903 aa9.21□□□□□ -0.94
PTP4A1-206ENST00000627002 PI4K2BQ8TCG2 481 aa9.21□□□□□ -0.94
PTP4A1-206ENST00000627002 CCDC85AQ96PX6 553 aaPredicted RBP9.21□□□□□ -0.94
PTP4A1-206ENST00000627002 CDC5LQ99459 802 aaKnown RBP9.21□□□□□ -0.94
PTP4A1-206ENST00000627002 CCDC8Q9H0W5 538 aaPredicted RBP9.21□□□□□ -0.94
PTP4A1-206ENST00000627002 CNNM1Q9NRU3 951 aa9.21□□□□□ -0.94
PTP4A1-206ENST00000627002 IGHMBP2P38935 993 aaKnown RBP9.2□□□□□ -0.94
PTP4A1-206ENST00000627002 NFIXQ14938 502 aa9.2□□□□□ -0.94
PTP4A1-206ENST00000627002 ZNF827Q17R98 1081 aa9.2□□□□□ -0.94
PTP4A1-206ENST00000627002 METTL24Q5JXM2 366 aa9.2□□□□□ -0.94
PTP4A1-206ENST00000627002 TSHZ3Q63HK5 1081 aa9.2□□□□□ -0.94
PTP4A1-206ENST00000627002 NLRP3Q96P20 1036 aa9.2□□□□□ -0.94
PTP4A1-206ENST00000627002 MPHOSPH8Q99549 860 aa9.2□□□□□ -0.94
PTP4A1-206ENST00000627002 PUS3Q9BZE2 481 aaKnown RBP9.2□□□□□ -0.94
PTP4A1-206ENST00000627002 RIPOR2Q9Y4F9 1068 aa9.2□□□□□ -0.94
PTP4A1-206ENST00000627002 MROH5Q6ZUA9 1318 aa9.2□□□□□ -0.94
PTP4A1-206ENST00000627002 ZNF609O15014 1411 aa9.2□□□□□ -0.94
PTP4A1-206ENST00000627002 TNS1Q9HBL0 1735 aaKnown RBP9.19□□□□□ -0.94
PTP4A1-206ENST00000627002 ATP5JP18859 108 aa9.19□□□□□ -0.94
PTP4A1-206ENST00000627002 NLGN1Q8N2Q7 840 aa9.19□□□□□ -0.94
PTP4A1-206ENST00000627002 CNBD1Q8NA66 436 aa9.19□□□□□ -0.94
PTP4A1-206ENST00000627002 RILPL2Q969X0 211 aa9.19□□□□□ -0.94
PTP4A1-206ENST00000627002 TLR7Q9NYK1 1049 aaKnown RBP9.19□□□□□ -0.94
PTP4A1-206ENST00000627002 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.19□□□□□ -0.94
PTP4A1-206ENST00000627002 ABCC12Q96J65 1359 aa9.19□□□□□ -0.94
PTP4A1-206ENST00000627002 RIC1Q4ADV7 1423 aa9.19□□□□□ -0.94
PTP4A1-206ENST00000627002 C4AP0C0L4 1744 aa9.19□□□□□ -0.94
PTP4A1-206ENST00000627002 COL24A1Q17RW2 1714 aa9.19□□□□□ -0.94
PTP4A1-206ENST00000627002 A0A1B0GUL7 405 aa9.18□□□□□ -0.94
PTP4A1-206ENST00000627002 C19orf67A6NJJ6 358 aa9.18□□□□□ -0.94
PTP4A1-206ENST00000627002 SEC24BO95487 1268 aa9.18□□□□□ -0.94
PTP4A1-206ENST00000627002 TM4SF1P30408 202 aa9.18□□□□□ -0.94
PTP4A1-206ENST00000627002 MFAP1P55081 439 aaKnown RBP9.18□□□□□ -0.94
PTP4A1-206ENST00000627002 LAMB2P55268 1798 aa9.18□□□□□ -0.94
PTP4A1-206ENST00000627002 ST5P78524 1137 aa9.18□□□□□ -0.94
PTP4A1-206ENST00000627002 UBR3Q6ZT12 1888 aa9.18□□□□□ -0.94
PTP4A1-206ENST00000627002 ANKRD18AQ8IVF6 992 aa9.18□□□□□ -0.94
PTP4A1-206ENST00000627002 EVI5LQ96CN4 794 aa9.18□□□□□ -0.94
PTP4A1-206ENST00000627002 NEUROD6Q96NK8 337 aa9.18□□□□□ -0.94
PTP4A1-206ENST00000627002 DBNDD2Q9BQY9 259 aa9.18□□□□□ -0.94
PTP4A1-206ENST00000627002 STK32BQ9NY57 414 aa9.18□□□□□ -0.94
PTP4A1-206ENST00000627002 DBNLQ9UJU6 430 aaKnown RBP9.18□□□□□ -0.94
PTP4A1-206ENST00000627002 HIP1O00291 1037 aa9.17□□□□□ -0.94
PTP4A1-206ENST00000627002 REC8O95072 547 aa9.17□□□□□ -0.94
PTP4A1-206ENST00000627002 PDE8BO95263 885 aa9.17□□□□□ -0.94
PTP4A1-206ENST00000627002 SERPINB2P05120 415 aa9.17□□□□□ -0.94
PTP4A1-206ENST00000627002 PUM3Q15397 648 aaKnown RBP9.17□□□□□ -0.94
PTP4A1-206ENST00000627002 ATP2B3Q16720 1220 aa9.17□□□□□ -0.94
PTP4A1-206ENST00000627002 CCDC158Q5M9N0 1113 aa9.17□□□□□ -0.94
PTP4A1-206ENST00000627002 GORABQ5T7V8 394 aa9.17□□□□□ -0.94
PTP4A1-206ENST00000627002 DDX46Q7L014 1031 aaKnown RBP9.17□□□□□ -0.94
PTP4A1-206ENST00000627002 TICAM2Q86XR7 235 aa9.17□□□□□ -0.94
PTP4A1-206ENST00000627002 COL23A1Q86Y22 540 aaPredicted RBP9.17□□□□□ -0.94
PTP4A1-206ENST00000627002 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.17□□□□□ -0.94
PTP4A1-206ENST00000627002 TBC1D32Q96NH3 1257 aa9.17□□□□□ -0.94
PTP4A1-206ENST00000627002 SEC31BQ9NQW1 1179 aa9.17□□□□□ -0.94
PTP4A1-206ENST00000627002 BSDC1Q9NW68 430 aaPredicted RBP9.17□□□□□ -0.94
PTP4A1-206ENST00000627002 DDX60Q8IY21 1712 aaKnown RBP9.17□□□□□ -0.94
PTP4A1-206ENST00000627002 PNPLA7Q6ZV29 1317 aa9.16□□□□□ -0.94
PTP4A1-206ENST00000627002 POLRMTO00411 1230 aaKnown RBP9.16□□□□□ -0.94
PTP4A1-206ENST00000627002 SLC5A1P13866 664 aa9.16□□□□□ -0.94
PTP4A1-206ENST00000627002 CHMLP26374 656 aa9.16□□□□□ -0.94
PTP4A1-206ENST00000627002 TIMM10P62072 90 aa9.16□□□□□ -0.94
PTP4A1-206ENST00000627002 SLC15A2Q16348 729 aa9.16□□□□□ -0.94
PTP4A1-206ENST00000627002 PRR5LQ6MZQ0 368 aa9.16□□□□□ -0.94
PTP4A1-206ENST00000627002 C3orf67Q6ZVT6 689 aa9.16□□□□□ -0.94
PTP4A1-206ENST00000627002 VGLL2Q8N8G2 317 aa9.16□□□□□ -0.94
PTP4A1-206ENST00000627002 RUFY2Q8WXA3 655 aa9.16□□□□□ -0.94
PTP4A1-206ENST00000627002 LPIN2Q92539 896 aa9.16□□□□□ -0.94
PTP4A1-206ENST00000627002 DDRGK1Q96HY6 314 aa9.16□□□□□ -0.94
PTP4A1-206ENST00000627002 HAUS7Q99871 368 aa9.16□□□□□ -0.94
PTP4A1-206ENST00000627002 C22orf23Q9BZE7 217 aa9.16□□□□□ -0.94
PTP4A1-206ENST00000627002 BOLA2Q9H3K6 86 aa9.16□□□□□ -0.94
PTP4A1-206ENST00000627002 CREBZFQ9NS37 354 aa9.16□□□□□ -0.94
PTP4A1-206ENST00000627002 RFX7Q2KHR2 1363 aa9.15□□□□□ -0.94
PTP4A1-206ENST00000627002 EPB41L2O43491 1005 aaKnown RBP9.15□□□□□ -0.94
PTP4A1-206ENST00000627002 MAP4K4O95819 1239 aaPredicted RBP9.15□□□□□ -0.94
PTP4A1-206ENST00000627002 IFIT1P09914 478 aaKnown RBP9.15□□□□□ -0.94
PTP4A1-206ENST00000627002 RPS8P62241 208 aaKnown RBP9.15□□□□□ -0.94
PTP4A1-206ENST00000627002 TTC39AQ5SRH9 613 aa9.15□□□□□ -0.94
PTP4A1-206ENST00000627002 XAGE2Q96GT9 111 aa9.15□□□□□ -0.94
PTP4A1-206ENST00000627002 ZNF512BQ96KM6 892 aaPredicted RBP9.15□□□□□ -0.94
PTP4A1-206ENST00000627002 ESYT1Q9BSJ8 1104 aa9.15□□□□□ -0.94
PTP4A1-206ENST00000627002 DIAPH3Q9NSV4 1193 aa9.15□□□□□ -0.94
PTP4A1-206ENST00000627002 MYH3P11055 1940 aa9.15□□□□□ -0.95
PTP4A1-206ENST00000627002 FGFR2P21802 821 aa9.14□□□□□ -0.95
PTP4A1-206ENST00000627002 RBM25P49756 843 aaKnown RBP9.14□□□□□ -0.95
PTP4A1-206ENST00000627002 CHRNDQ07001 517 aa9.14□□□□□ -0.95
PTP4A1-206ENST00000627002 DDR1Q08345 913 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms