RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 VGLL2Q8N8G2 317 aa14.41□□□□□ -0.1
LINC00963-220ENST00000625171 SIL1Q9H173 461 aa14.41□□□□□ -0.1
LINC00963-220ENST00000625171 CD2APQ9Y5K6 639 aa14.41□□□□□ -0.1
LINC00963-220ENST00000625171 POLRMTO00411 1230 aaKnown RBP14.4□□□□□ -0.1
LINC00963-220ENST00000625171 SERPINB2P05120 415 aa14.4□□□□□ -0.1
LINC00963-220ENST00000625171 ATP5JP18859 108 aa14.4□□□□□ -0.1
LINC00963-220ENST00000625171 CRY2Q49AN0 593 aa14.4□□□□□ -0.1
LINC00963-220ENST00000625171 TAF7LQ5H9L4 462 aa14.4□□□□□ -0.1
LINC00963-220ENST00000625171 BICDL1Q6ZP65 573 aa14.4□□□□□ -0.1
LINC00963-220ENST00000625171 AACSQ86V21 672 aa14.4□□□□□ -0.1
LINC00963-220ENST00000625171 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.4□□□□□ -0.1
LINC00963-220ENST00000625171 ZNF594Q96JF6 807 aaPredicted RBP14.4□□□□□ -0.1
LINC00963-220ENST00000625171 ZNF512BQ96KM6 892 aaPredicted RBP14.4□□□□□ -0.1
LINC00963-220ENST00000625171 PUS3Q9BZE2 481 aaKnown RBP14.4□□□□□ -0.1
LINC00963-220ENST00000625171 BSDC1Q9NW68 430 aaPredicted RBP14.4□□□□□ -0.1
LINC00963-220ENST00000625171 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.4□□□□□ -0.1
LINC00963-220ENST00000625171 PDE8BO95263 885 aa14.39□□□□□ -0.11
LINC00963-220ENST00000625171 SDSP20132 328 aa14.39□□□□□ -0.11
LINC00963-220ENST00000625171 PRR5LQ6MZQ0 368 aa14.39□□□□□ -0.11
LINC00963-220ENST00000625171 CNBD1Q8NA66 436 aa14.39□□□□□ -0.11
LINC00963-220ENST00000625171 GPBP1L1Q9HC44 474 aaPredicted RBP14.39□□□□□ -0.11
LINC00963-220ENST00000625171 ABCC12Q96J65 1359 aa14.38□□□□□ -0.11
LINC00963-220ENST00000625171 EPB41L2O43491 1005 aaKnown RBP14.38□□□□□ -0.11
LINC00963-220ENST00000625171 CDC45O75419 566 aa14.38□□□□□ -0.11
LINC00963-220ENST00000625171 HSPA6P17066 643 aa14.38□□□□□ -0.11
LINC00963-220ENST00000625171 HOXA10P31260 410 aaPredicted RBP14.38□□□□□ -0.11
LINC00963-220ENST00000625171 IGHMBP2P38935 993 aaKnown RBP14.38□□□□□ -0.11
LINC00963-220ENST00000625171 FAM177BA6PVY3 158 aa14.37□□□□□ -0.11
LINC00963-220ENST00000625171 MSH5O43196 834 aa14.37□□□□□ -0.11
LINC00963-220ENST00000625171 FGFR2P21802 821 aa14.37□□□□□ -0.11
LINC00963-220ENST00000625171 RPS8P62241 208 aaKnown RBP14.37□□□□□ -0.11
LINC00963-220ENST00000625171 ST5P78524 1137 aa14.37□□□□□ -0.11
LINC00963-220ENST00000625171 DDR1Q08345 913 aa14.37□□□□□ -0.11
LINC00963-220ENST00000625171 MPHOSPH8Q99549 860 aa14.37□□□□□ -0.11
LINC00963-220ENST00000625171 BRIP1Q9BX63 1249 aa14.37□□□□□ -0.11
LINC00963-220ENST00000625171 CNNM1Q9NRU3 951 aa14.37□□□□□ -0.11
LINC00963-220ENST00000625171 DBNLQ9UJU6 430 aaKnown RBP14.37□□□□□ -0.11
LINC00963-220ENST00000625171 RBM19Q9Y4C8 960 aaKnown RBP14.37□□□□□ -0.11
LINC00963-220ENST00000625171 NRXN2Q9P2S2 1712 aa14.37□□□□□ -0.11
LINC00963-220ENST00000625171 A0A1B0GUL7 405 aa14.36□□□□□ -0.11
LINC00963-220ENST00000625171 ANKRD18AQ8IVF6 992 aa14.36□□□□□ -0.11
LINC00963-220ENST00000625171 SEC31BQ9NQW1 1179 aa14.36□□□□□ -0.11
LINC00963-220ENST00000625171 ZNF609O15014 1411 aa14.35□□□□□ -0.11
LINC00963-220ENST00000625171 METTL24Q5JXM2 366 aa14.35□□□□□ -0.11
LINC00963-220ENST00000625171 C3orf67Q6ZVT6 689 aa14.35□□□□□ -0.11
LINC00963-220ENST00000625171 CNTROBQ8N137 903 aa14.35□□□□□ -0.11
LINC00963-220ENST00000625171 LPIN2Q92539 896 aa14.35□□□□□ -0.11
LINC00963-220ENST00000625171 EVI5LQ96CN4 794 aa14.35□□□□□ -0.11
LINC00963-220ENST00000625171 CCDC8Q9H0W5 538 aaPredicted RBP14.35□□□□□ -0.11
LINC00963-220ENST00000625171 BBOX1O75936 387 aa14.34□□□□□ -0.11
LINC00963-220ENST00000625171 TIMM10P62072 90 aa14.34□□□□□ -0.11
LINC00963-220ENST00000625171 PUM3Q15397 648 aaKnown RBP14.34□□□□□ -0.11
LINC00963-220ENST00000625171 CASC1Q6TDU7 716 aa14.34□□□□□ -0.11
LINC00963-220ENST00000625171 TBC1D9Q6ZT07 1266 aa14.34□□□□□ -0.11
LINC00963-220ENST00000625171 DDX46Q7L014 1031 aaKnown RBP14.34□□□□□ -0.11
LINC00963-220ENST00000625171 TMC4Q7Z404 712 aa14.34□□□□□ -0.11
LINC00963-220ENST00000625171 CCDC85AQ96PX6 553 aaPredicted RBP14.34□□□□□ -0.11
LINC00963-220ENST00000625171 CRAMP1Q96RY5 1269 aa14.34□□□□□ -0.11
LINC00963-220ENST00000625171 HAUS7Q99871 368 aa14.34□□□□□ -0.11
LINC00963-220ENST00000625171 GRAPQ13588 217 aa14.33□□□□□ -0.12
LINC00963-220ENST00000625171 UBE4AQ14139 1066 aa14.33□□□□□ -0.12
LINC00963-220ENST00000625171 ATP2B3Q16720 1220 aa14.33□□□□□ -0.12
LINC00963-220ENST00000625171 CCDC158Q5M9N0 1113 aa14.33□□□□□ -0.12
LINC00963-220ENST00000625171 MSL1Q68DK7 614 aa14.33□□□□□ -0.12
LINC00963-220ENST00000625171 GRAPLQ8TC17 118 aaPredicted RBP14.33□□□□□ -0.12
LINC00963-220ENST00000625171 DBNDD2Q9BQY9 259 aa14.33□□□□□ -0.12
LINC00963-220ENST00000625171 ANKRD2Q9GZV1 360 aa14.33□□□□□ -0.12
LINC00963-220ENST00000625171 TLR7Q9NYK1 1049 aaKnown RBP14.33□□□□□ -0.12
LINC00963-220ENST00000625171 MINPP1Q9UNW1 487 aa14.33□□□□□ -0.12
LINC00963-220ENST00000625171 PARP3Q9Y6F1 533 aa14.33□□□□□ -0.12
LINC00963-220ENST00000625171 RFX7Q2KHR2 1363 aa14.33□□□□□ -0.12
LINC00963-220ENST00000625171 HIP1O00291 1037 aa14.32□□□□□ -0.12
LINC00963-220ENST00000625171 CHMLP26374 656 aa14.32□□□□□ -0.12
LINC00963-220ENST00000625171 PDE6BP35913 854 aa14.32□□□□□ -0.12
LINC00963-220ENST00000625171 XAGE2Q96GT9 111 aa14.32□□□□□ -0.12
LINC00963-220ENST00000625171 SNRKQ9NRH2 765 aa14.32□□□□□ -0.12
LINC00963-220ENST00000625171 NPHP1O15259 732 aa14.31□□□□□ -0.12
LINC00963-220ENST00000625171 IGSF3O75054 1194 aa14.31□□□□□ -0.12
LINC00963-220ENST00000625171 SEC24BO95487 1268 aa14.31□□□□□ -0.12
LINC00963-220ENST00000625171 MMP10P09238 476 aa14.31□□□□□ -0.12
LINC00963-220ENST00000625171 CHRNDQ07001 517 aa14.31□□□□□ -0.12
LINC00963-220ENST00000625171 CELF1Q92879 486 aaKnown RBP14.31□□□□□ -0.12
LINC00963-220ENST00000625171 RBM17Q96I25 401 aaKnown RBP14.31□□□□□ -0.12
LINC00963-220ENST00000625171 NEUROD6Q96NK8 337 aa14.31□□□□□ -0.12
LINC00963-220ENST00000625171 UPF2Q9HAU5 1272 aaKnown RBP14.31□□□□□ -0.12
LINC00963-220ENST00000625171 IFIT1P09914 478 aaKnown RBP14.3□□□□□ -0.12
LINC00963-220ENST00000625171 UQCRFS1P1P0C7P4 283 aa14.3□□□□□ -0.12
LINC00963-220ENST00000625171 SLC5A1P13866 664 aa14.3□□□□□ -0.12
LINC00963-220ENST00000625171 ARID4AP29374 1257 aaPredicted RBP14.3□□□□□ -0.12
LINC00963-220ENST00000625171 TSHZ3Q63HK5 1081 aa14.3□□□□□ -0.12
LINC00963-220ENST00000625171 C15orf52Q6ZUT6 534 aaKnown RBP14.3□□□□□ -0.12
LINC00963-220ENST00000625171 IL27Q8NEV9 243 aa14.3□□□□□ -0.12
LINC00963-220ENST00000625171 TRIM6-TRIM34B2RNG4 842 aa14.29□□□□□ -0.12
LINC00963-220ENST00000625171 REC8O95072 547 aa14.29□□□□□ -0.12
LINC00963-220ENST00000625171 SRGNP10124 158 aa14.29□□□□□ -0.12
LINC00963-220ENST00000625171 NPR1P16066 1061 aa14.29□□□□□ -0.12
LINC00963-220ENST00000625171 RBM25P49756 843 aaKnown RBP14.29□□□□□ -0.12
LINC00963-220ENST00000625171 RPGRQ92834 1020 aaKnown RBP14.29□□□□□ -0.12
LINC00963-220ENST00000625171 TBC1D32Q96NH3 1257 aa14.29□□□□□ -0.12
LINC00963-220ENST00000625171 PODXL2Q9NZ53 605 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms