RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 PGBD1Q96JS3 809 aa17.99■□□□□ 0.47
LINC00552-201ENST00000625151 DBNDD2Q9BQY9 259 aa17.99■□□□□ 0.47
LINC00552-201ENST00000625151 MYH15Q9Y2K3 1946 aa17.99■□□□□ 0.47
LINC00552-201ENST00000625151 CYP21A2P08686 494 aa17.99■□□□□ 0.47
LINC00552-201ENST00000625151 BRF1Q92994 677 aa17.99■□□□□ 0.47
LINC00552-201ENST00000625151 COL18A1P39060 1754 aa17.99■□□□□ 0.47
LINC00552-201ENST00000625151 NR1I2O75469 434 aa17.98■□□□□ 0.47
LINC00552-201ENST00000625151 RBM43Q6ZSC3 357 aaKnown RBP17.98■□□□□ 0.47
LINC00552-201ENST00000625151 DDX11Q96FC9 970 aa17.98■□□□□ 0.47
LINC00552-201ENST00000625151 CLSTN2Q9H4D0 955 aa17.98■□□□□ 0.47
LINC00552-201ENST00000625151 CBX8Q9HC52 389 aa17.98■□□□□ 0.47
LINC00552-201ENST00000625151 DDX19AQ9NUU7 478 aaKnown RBP17.98■□□□□ 0.47
LINC00552-201ENST00000625151 NLRP2Q9NX02 1062 aa17.98■□□□□ 0.47
LINC00552-201ENST00000625151 MEGF6O75095 1541 aa17.98■□□□□ 0.47
LINC00552-201ENST00000625151 ROBO1Q9Y6N7 1651 aa17.98■□□□□ 0.47
LINC00552-201ENST00000625151 TPM3P06753 285 aa17.98■□□□□ 0.47
LINC00552-201ENST00000625151 GTF2F1P35269 517 aaKnown RBP eCLIP17.98■□□□□ 0.47
LINC00552-201ENST00000625151 RESTQ13127 1097 aa17.98■□□□□ 0.47
LINC00552-201ENST00000625151 RABL6Q3YEC7 729 aaPredicted RBP17.98■□□□□ 0.47
LINC00552-201ENST00000625151 ATP5J2-PTCD1G3V325 749 aa17.97■□□□□ 0.47
LINC00552-201ENST00000625151 PTCD1O75127 700 aaKnown RBP17.97■□□□□ 0.47
LINC00552-201ENST00000625151 DDX46Q7L014 1031 aaKnown RBP17.97■□□□□ 0.47
LINC00552-201ENST00000625151 LRRC2Q9BYS8 371 aa17.97■□□□□ 0.47
LINC00552-201ENST00000625151 RFX7Q2KHR2 1363 aa17.97■□□□□ 0.47
LINC00552-201ENST00000625151 GOLGA6L6A8MZA4 724 aa17.97■□□□□ 0.47
LINC00552-201ENST00000625151 HSP90B1P14625 803 aaKnown RBP17.97■□□□□ 0.47
LINC00552-201ENST00000625151 PTGS1P23219 599 aa17.97■□□□□ 0.47
LINC00552-201ENST00000625151 U3KPZ7 1027 aaPredicted RBP17.97■□□□□ 0.47
LINC00552-201ENST00000625151 ZNF710Q8N1W2 664 aa17.96■□□□□ 0.47
LINC00552-201ENST00000625151 BICD2Q8TD16 824 aa17.96■□□□□ 0.47
LINC00552-201ENST00000625151 HAUS7Q99871 368 aa17.96■□□□□ 0.47
LINC00552-201ENST00000625151 MCMDC2Q4G0Z9 681 aa17.96■□□□□ 0.47
LINC00552-201ENST00000625151 STOX1Q6ZVD7 989 aa17.96■□□□□ 0.47
LINC00552-201ENST00000625151 FAM177BA6PVY3 158 aa17.95■□□□□ 0.46
LINC00552-201ENST00000625151 SNRPA1P09661 255 aaKnown RBP17.95■□□□□ 0.46
LINC00552-201ENST00000625151 TATP17735 454 aaPredicted RBP17.95■□□□□ 0.46
LINC00552-201ENST00000625151 SCRN1Q12765 414 aa17.95■□□□□ 0.46
LINC00552-201ENST00000625151 CCDC9Q9Y3X0 531 aaKnown RBP17.95■□□□□ 0.46
LINC00552-201ENST00000625151 A0A087WZG4 1122 aa17.95■□□□□ 0.46
LINC00552-201ENST00000625151 H3BQV1 296 aa17.94■□□□□ 0.46
LINC00552-201ENST00000625151 SLFNL1Q499Z3 407 aa17.94■□□□□ 0.46
LINC00552-201ENST00000625151 IFFO2Q5TF58 517 aa17.94■□□□□ 0.46
LINC00552-201ENST00000625151 CASP7P55210 303 aa17.94■□□□□ 0.46
LINC00552-201ENST00000625151 IFNL2Q8IZJ0 200 aa17.94■□□□□ 0.46
LINC00552-201ENST00000625151 TTC5Q8N0Z6 440 aa17.94■□□□□ 0.46
LINC00552-201ENST00000625151 DNAJC25Q9H1X3 360 aa17.93■□□□□ 0.46
LINC00552-201ENST00000625151 CPDO75976 1380 aa17.93■□□□□ 0.46
LINC00552-201ENST00000625151 CCDC186Q7Z3E2 898 aa17.93■□□□□ 0.46
LINC00552-201ENST00000625151 TDRD7Q8NHU6 1098 aaKnown RBP17.93■□□□□ 0.46
LINC00552-201ENST00000625151 SMARCC2Q8TAQ2 1214 aa17.93■□□□□ 0.46
LINC00552-201ENST00000625151 NRBP1Q9UHY1 535 aa17.93■□□□□ 0.46
LINC00552-201ENST00000625151 KIF3AQ9Y496 699 aa17.93■□□□□ 0.46
LINC00552-201ENST00000625151 SH3TC1Q8TE82 1336 aa17.92■□□□□ 0.46
LINC00552-201ENST00000625151 PIP4K2BP78356 416 aa17.92■□□□□ 0.46
LINC00552-201ENST00000625151 LMBR1LQ6UX01 489 aa17.92■□□□□ 0.46
LINC00552-201ENST00000625151 PLA2G4DQ86XP0 818 aa17.92■□□□□ 0.46
LINC00552-201ENST00000625151 KBTBD3Q8NAB2 608 aa17.92■□□□□ 0.46
LINC00552-201ENST00000625151 ABCA3Q99758 1704 aa17.92■□□□□ 0.46
LINC00552-201ENST00000625151 GLI3P10071 1580 aa17.92■□□□□ 0.46
LINC00552-201ENST00000625151 CYP27B1O15528 508 aa17.92■□□□□ 0.46
LINC00552-201ENST00000625151 ZNF75DP51815 510 aa17.92■□□□□ 0.46
LINC00552-201ENST00000625151 CEBPZQ03701 1054 aaKnown RBP17.92■□□□□ 0.46
LINC00552-201ENST00000625151 LRMPQ12912 555 aa17.92■□□□□ 0.46
LINC00552-201ENST00000625151 FMNL2Q96PY5 1086 aa17.92■□□□□ 0.46
LINC00552-201ENST00000625151 TRIM5Q9C035 493 aa17.92■□□□□ 0.46
LINC00552-201ENST00000625151 ZSCAN16Q9H4T2 348 aaPredicted RBP17.92■□□□□ 0.46
LINC00552-201ENST00000625151 LAMB4A4D0S4 1761 aa17.92■□□□□ 0.46
LINC00552-201ENST00000625151 ZNF165P49910 485 aa17.91■□□□□ 0.46
LINC00552-201ENST00000625151 FOSBP53539 338 aa17.91■□□□□ 0.46
LINC00552-201ENST00000625151 FGD1P98174 961 aa17.91■□□□□ 0.46
LINC00552-201ENST00000625151 PRDM11Q9NQV5 511 aa17.91■□□□□ 0.46
LINC00552-201ENST00000625151 PFKFB2O60825 505 aa17.91■□□□□ 0.46
LINC00552-201ENST00000625151 ADD1P35611 737 aaKnown RBP17.91■□□□□ 0.46
LINC00552-201ENST00000625151 NSUN7Q8NE18 718 aaKnown RBP17.91■□□□□ 0.46
LINC00552-201ENST00000625151 FTOQ9C0B1 505 aaKnown RBP eCLIP17.91■□□□□ 0.46
LINC00552-201ENST00000625151 A0A0G2JLW4 131 aa17.9■□□□□ 0.46
LINC00552-201ENST00000625151 CTDNEP1O95476 244 aa17.9■□□□□ 0.46
LINC00552-201ENST00000625151 DRC7Q8IY82 874 aa17.9■□□□□ 0.46
LINC00552-201ENST00000625151 DCAF5Q96JK2 942 aa17.9■□□□□ 0.46
LINC00552-201ENST00000625151 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.9■□□□□ 0.46
LINC00552-201ENST00000625151 CFAP45Q9UL16 551 aa17.9■□□□□ 0.46
LINC00552-201ENST00000625151 PALLDQ8WX93 1383 aa17.9■□□□□ 0.46
LINC00552-201ENST00000625151 GOLIM4O00461 696 aa17.9■□□□□ 0.46
LINC00552-201ENST00000625151 RIOK3O14730 519 aaKnown RBP17.9■□□□□ 0.46
LINC00552-201ENST00000625151 APOBRQ0VD83 1088 aa17.9■□□□□ 0.46
LINC00552-201ENST00000625151 BCL2L12Q9HB09 334 aa17.9■□□□□ 0.46
LINC00552-201ENST00000625151 CSB-PGBD3P0DP91 1061 aa17.89■□□□□ 0.46
LINC00552-201ENST00000625151 FOXO4P98177 505 aa17.89■□□□□ 0.46
LINC00552-201ENST00000625151 DHX32Q7L7V1 743 aaKnown RBP17.89■□□□□ 0.46
LINC00552-201ENST00000625151 ATG9AQ7Z3C6 839 aa17.89■□□□□ 0.46
LINC00552-201ENST00000625151 PLBD2Q8NHP8 589 aa17.89■□□□□ 0.46
LINC00552-201ENST00000625151 NEUROD6Q96NK8 337 aa17.89■□□□□ 0.46
LINC00552-201ENST00000625151 LLPHQ9BRT6 129 aaKnown RBP17.89■□□□□ 0.46
LINC00552-201ENST00000625151 CCDC94Q9BW85 323 aaPredicted RBP17.89■□□□□ 0.45
LINC00552-201ENST00000625151 PAG1Q9NWQ8 432 aa17.89■□□□□ 0.45
LINC00552-201ENST00000625151 PKD1L3Q7Z443 1732 aa17.89■□□□□ 0.45
LINC00552-201ENST00000625151 TJP1Q07157 1748 aa17.88■□□□□ 0.45
LINC00552-201ENST00000625151 PTPDC1A2A3K4 754 aa17.88■□□□□ 0.45
LINC00552-201ENST00000625151 PPFIA3O75145 1194 aa17.88■□□□□ 0.45
LINC00552-201ENST00000625151 HMGB1P09429 215 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms