RNA–Protein interactions for RNA: ENST00000625133.1

PCDHB19P-202, Transcript of protocadherin beta 19 pseudogene, humanhuman

BASIC

Gene PCDHB19P, Length 2,914 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB19P-202ENST00000625133 CPA1P15085 419 aa16.48■□□□□ 0.23
PCDHB19P-202ENST00000625133 TAF7LQ5H9L4 462 aa16.48■□□□□ 0.23
PCDHB19P-202ENST00000625133 ZSCAN30Q86W11 494 aa16.48■□□□□ 0.23
PCDHB19P-202ENST00000625133 CNTROBQ8N137 903 aa16.48■□□□□ 0.23
PCDHB19P-202ENST00000625133 DNAJC2Q99543 621 aaKnown RBP16.48■□□□□ 0.23
PCDHB19P-202ENST00000625133 GREM2Q9H772 168 aa16.48■□□□□ 0.23
PCDHB19P-202ENST00000625133 IRS4O14654 1257 aaPredicted RBP16.47■□□□□ 0.23
PCDHB19P-202ENST00000625133 GADD45BO75293 160 aaPredicted RBP16.47■□□□□ 0.23
PCDHB19P-202ENST00000625133 PDE4CQ08493 712 aa16.47■□□□□ 0.23
PCDHB19P-202ENST00000625133 BCL2L12Q9HB09 334 aa16.47■□□□□ 0.23
PCDHB19P-202ENST00000625133 NIP7Q9Y221 180 aaKnown RBP eCLIP16.47■□□□□ 0.23
PCDHB19P-202ENST00000625133 SNX14Q9Y5W7 946 aa16.47■□□□□ 0.23
PCDHB19P-202ENST00000625133 BTAF1O14981 1849 aa16.47■□□□□ 0.23
PCDHB19P-202ENST00000625133 COL15A1P39059 1388 aa16.47■□□□□ 0.23
PCDHB19P-202ENST00000625133 GLRX3O76003 335 aaKnown RBP16.47■□□□□ 0.23
PCDHB19P-202ENST00000625133 TTLL11Q8NHH1 800 aa16.47■□□□□ 0.23
PCDHB19P-202ENST00000625133 GPATCH3Q96I76 525 aa16.47■□□□□ 0.23
PCDHB19P-202ENST00000625133 LSG1Q9H089 658 aaKnown RBP16.46■□□□□ 0.23
PCDHB19P-202ENST00000625133 DBNLQ9UJU6 430 aaKnown RBP16.46■□□□□ 0.23
PCDHB19P-202ENST00000625133 CCDC57Q2TAC2 916 aa16.46■□□□□ 0.23
PCDHB19P-202ENST00000625133 USPL1Q5W0Q7 1092 aa16.46■□□□□ 0.23
PCDHB19P-202ENST00000625133 PROM2Q8N271 834 aa16.46■□□□□ 0.23
PCDHB19P-202ENST00000625133 BCL11BQ9C0K0 894 aaPredicted RBP16.46■□□□□ 0.23
PCDHB19P-202ENST00000625133 RAD50Q92878 1312 aa16.46■□□□□ 0.23
PCDHB19P-202ENST00000625133 TNNI3KQ59H18 835 aa16.46■□□□□ 0.22
PCDHB19P-202ENST00000625133 FPGT-TNNI3KV9GXZ4 949 aa16.46■□□□□ 0.22
PCDHB19P-202ENST00000625133 CSF1RP07333 972 aa16.45■□□□□ 0.22
PCDHB19P-202ENST00000625133 NUP98P52948 1817 aa16.45■□□□□ 0.22
PCDHB19P-202ENST00000625133 DIAPH3Q9NSV4 1193 aa16.45■□□□□ 0.22
PCDHB19P-202ENST00000625133 MBD3O95983 291 aa16.45■□□□□ 0.22
PCDHB19P-202ENST00000625133 TBC1D9BQ66K14 1250 aa16.45■□□□□ 0.22
PCDHB19P-202ENST00000625133 FAM196AQ6ZSG2 479 aa16.45■□□□□ 0.22
PCDHB19P-202ENST00000625133 C3orf67Q6ZVT6 689 aa16.45■□□□□ 0.22
PCDHB19P-202ENST00000625133 ARHGEF1Q92888 912 aaKnown RBP16.45■□□□□ 0.22
PCDHB19P-202ENST00000625133 IL17RAQ96F46 866 aa16.45■□□□□ 0.22
PCDHB19P-202ENST00000625133 MSNP26038 577 aaKnown RBP16.44■□□□□ 0.22
PCDHB19P-202ENST00000625133 AK2P54819 239 aa16.44■□□□□ 0.22
PCDHB19P-202ENST00000625133 USP48Q86UV5 1035 aa16.44■□□□□ 0.22
PCDHB19P-202ENST00000625133 SLFNL1Q499Z3 407 aa16.44■□□□□ 0.22
PCDHB19P-202ENST00000625133 HSP90AB3PQ58FF7 597 aa16.44■□□□□ 0.22
PCDHB19P-202ENST00000625133 POTEAQ6S8J7 498 aa16.44■□□□□ 0.22
PCDHB19P-202ENST00000625133 FAM227BQ96M60 508 aa16.44■□□□□ 0.22
PCDHB19P-202ENST00000625133 FSD1Q9BTV5 496 aa16.44■□□□□ 0.22
PCDHB19P-202ENST00000625133 SEC31BQ9NQW1 1179 aa16.43■□□□□ 0.22
PCDHB19P-202ENST00000625133 BRWD3Q6RI45 1802 aa16.43■□□□□ 0.22
PCDHB19P-202ENST00000625133 SNAP23O00161 211 aa16.43■□□□□ 0.22
PCDHB19P-202ENST00000625133 ITGA6P23229 1130 aa16.43■□□□□ 0.22
PCDHB19P-202ENST00000625133 RBM6P78332 1123 aaKnown RBP16.43■□□□□ 0.22
PCDHB19P-202ENST00000625133 KIAA1211Q6ZU35 1233 aa16.43■□□□□ 0.22
PCDHB19P-202ENST00000625133 RUFY3Q7L099 469 aa16.43■□□□□ 0.22
PCDHB19P-202ENST00000625133 PDLIM2Q96JY6 352 aa16.43■□□□□ 0.22
PCDHB19P-202ENST00000625133 TTC14Q96N46 770 aa16.43■□□□□ 0.22
PCDHB19P-202ENST00000625133 RPAP1Q9BWH6 1393 aaPredicted RBP16.43■□□□□ 0.22
PCDHB19P-202ENST00000625133 RPS6KA4O75676 772 aa16.42■□□□□ 0.22
PCDHB19P-202ENST00000625133 PTH1RQ03431 593 aa16.42■□□□□ 0.22
PCDHB19P-202ENST00000625133 DDX46Q7L014 1031 aaKnown RBP16.42■□□□□ 0.22
PCDHB19P-202ENST00000625133 TTC41PQ6P2S7 1318 aa16.42■□□□□ 0.22
PCDHB19P-202ENST00000625133 HELBQ8NG08 1087 aaPredicted RBP16.42■□□□□ 0.22
PCDHB19P-202ENST00000625133 SNRKQ9NRH2 765 aa16.42■□□□□ 0.22
PCDHB19P-202ENST00000625133 SBF2Q86WG5 1849 aa16.42■□□□□ 0.22
PCDHB19P-202ENST00000625133 EYA2O00167 538 aa16.42■□□□□ 0.22
PCDHB19P-202ENST00000625133 LARGE1O95461 756 aa16.42■□□□□ 0.22
PCDHB19P-202ENST00000625133 CTSWP56202 376 aa16.42■□□□□ 0.22
PCDHB19P-202ENST00000625133 IFIT5Q13325 482 aaKnown RBP16.42■□□□□ 0.22
PCDHB19P-202ENST00000625133 UTP14AQ9BVJ6 771 aaKnown RBP16.42■□□□□ 0.22
PCDHB19P-202ENST00000625133 PLA2G12BQ9BX93 195 aa16.42■□□□□ 0.22
PCDHB19P-202ENST00000625133 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.42■□□□□ 0.22
PCDHB19P-202ENST00000625133 CNTNAP4Q9C0A0 1308 aa16.41■□□□□ 0.22
PCDHB19P-202ENST00000625133 WDR33Q9C0J8 1336 aaKnown RBP16.41■□□□□ 0.22
PCDHB19P-202ENST00000625133 NTSR2O95665 410 aa16.41■□□□□ 0.22
PCDHB19P-202ENST00000625133 CASTP20810 708 aaKnown RBP16.41■□□□□ 0.22
PCDHB19P-202ENST00000625133 RBM10P98175 930 aaKnown RBP16.41■□□□□ 0.22
PCDHB19P-202ENST00000625133 ERFEQ4G0M1 354 aa16.41■□□□□ 0.22
PCDHB19P-202ENST00000625133 CNPY2Q9Y2B0 182 aa16.41■□□□□ 0.22
PCDHB19P-202ENST00000625133 ADCK5Q3MIX3 580 aa16.41■□□□□ 0.22
PCDHB19P-202ENST00000625133 ZNF772Q68DY9 489 aaPredicted RBP16.4■□□□□ 0.22
PCDHB19P-202ENST00000625133 COL5A3P25940 1745 aaPredicted RBP16.4■□□□□ 0.22
PCDHB19P-202ENST00000625133 NHSQ6T4R5 1651 aa16.4■□□□□ 0.22
PCDHB19P-202ENST00000625133 WTIPA6NIX2 430 aaPredicted RBP16.4■□□□□ 0.22
PCDHB19P-202ENST00000625133 GORABQ5T7V8 394 aa16.4■□□□□ 0.22
PCDHB19P-202ENST00000625133 RTCBQ9Y3I0 505 aaKnown RBP16.4■□□□□ 0.22
PCDHB19P-202ENST00000625133 CDHR2Q9BYE9 1310 aa16.4■□□□□ 0.22
PCDHB19P-202ENST00000625133 PDE8AO60658 829 aa16.39■□□□□ 0.21
PCDHB19P-202ENST00000625133 ADORA1P30542 326 aa16.39■□□□□ 0.21
PCDHB19P-202ENST00000625133 NMIQ13287 307 aaPredicted RBP16.39■□□□□ 0.21
PCDHB19P-202ENST00000625133 RC3H1Q5TC82 1133 aaKnown RBP16.39■□□□□ 0.21
PCDHB19P-202ENST00000625133 PRPF40BQ6NWY9 871 aaKnown RBP16.39■□□□□ 0.21
PCDHB19P-202ENST00000625133 LDHAL6AQ6ZMR3 332 aa16.39■□□□□ 0.21
PCDHB19P-202ENST00000625133 SLC51AQ86UW1 340 aa16.39■□□□□ 0.21
PCDHB19P-202ENST00000625133 CNNM1Q9NRU3 951 aa16.39■□□□□ 0.21
PCDHB19P-202ENST00000625133 CEP126Q9P2H0 1117 aa16.39■□□□□ 0.21
PCDHB19P-202ENST00000625133 SH3TC1Q8TE82 1336 aa16.39■□□□□ 0.21
PCDHB19P-202ENST00000625133 USP42Q9H9J4 1324 aaKnown RBP16.39■□□□□ 0.21
PCDHB19P-202ENST00000625133 EPB41L2O43491 1005 aaKnown RBP16.39■□□□□ 0.21
PCDHB19P-202ENST00000625133 TSPY26PQ9H489 355 aa16.39■□□□□ 0.21
PCDHB19P-202ENST00000625133 LIMCH1Q9UPQ0 1083 aa16.39■□□□□ 0.21
PCDHB19P-202ENST00000625133 A0A1B0GUL7 405 aa16.39■□□□□ 0.21
PCDHB19P-202ENST00000625133 RXRBP28702 533 aa16.39■□□□□ 0.21
PCDHB19P-202ENST00000625133 EVI5LQ96CN4 794 aa16.39■□□□□ 0.21
PCDHB19P-202ENST00000625133 GOLIM4O00461 696 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms