RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 HOXA10P31260 410 aaPredicted RBP21.91■■□□□ 1.1
PTCHD3-202ENST00000622555 A0A1B0GUL6 1792 aa21.9■■□□□ 1.1
PTCHD3-202ENST00000622555 IFIT2P09913 472 aaKnown RBP21.9■■□□□ 1.1
PTCHD3-202ENST00000622555 SRGNP10124 158 aa21.9■■□□□ 1.1
PTCHD3-202ENST00000622555 NPR1P16066 1061 aa21.9■■□□□ 1.1
PTCHD3-202ENST00000622555 TNNI3KQ59H18 835 aa21.9■■□□□ 1.1
PTCHD3-202ENST00000622555 PLEKHM2Q8IWE5 1019 aa21.9■■□□□ 1.1
PTCHD3-202ENST00000622555 EAF2Q96CJ1 260 aaPredicted RBP21.9■■□□□ 1.1
PTCHD3-202ENST00000622555 FPGT-TNNI3KV9GXZ4 949 aa21.9■■□□□ 1.1
PTCHD3-202ENST00000622555 C2CD5Q86YS7 1000 aa21.89■■□□□ 1.1
PTCHD3-202ENST00000622555 CRAMP1Q96RY5 1269 aa21.89■■□□□ 1.1
PTCHD3-202ENST00000622555 KIF13BQ9NQT8 1826 aa21.89■■□□□ 1.09
PTCHD3-202ENST00000622555 CACNA1SQ13698 1873 aa21.89■■□□□ 1.09
PTCHD3-202ENST00000622555 HELBQ8NG08 1087 aaPredicted RBP21.89■■□□□ 1.09
PTCHD3-202ENST00000622555 GPR108Q9NPR9 543 aa21.89■■□□□ 1.09
PTCHD3-202ENST00000622555 ZNF609O15014 1411 aa21.88■■□□□ 1.09
PTCHD3-202ENST00000622555 H0YIN7 160 aa21.88■■□□□ 1.09
PTCHD3-202ENST00000622555 MX1P20591 662 aa21.88■■□□□ 1.09
PTCHD3-202ENST00000622555 CHRNDQ07001 517 aa21.88■■□□□ 1.09
PTCHD3-202ENST00000622555 VGLL2Q8N8G2 317 aa21.88■■□□□ 1.09
PTCHD3-202ENST00000622555 MASTLQ96GX5 879 aa21.88■■□□□ 1.09
PTCHD3-202ENST00000622555 CCDC8Q9H0W5 538 aaPredicted RBP21.88■■□□□ 1.09
PTCHD3-202ENST00000622555 AKAP2Q9Y2D5 859 aa21.88■■□□□ 1.09
PTCHD3-202ENST00000622555 SALL3Q9BXA9 1300 aa21.87■■□□□ 1.09
PTCHD3-202ENST00000622555 PDE8BO95263 885 aa21.86■■□□□ 1.09
PTCHD3-202ENST00000622555 PDE1AP54750 535 aa21.86■■□□□ 1.09
PTCHD3-202ENST00000622555 MINPP1Q9UNW1 487 aa21.86■■□□□ 1.09
PTCHD3-202ENST00000622555 TAF5LO75529 589 aa21.86■■□□□ 1.09
PTCHD3-202ENST00000622555 BBOX1O75936 387 aa21.86■■□□□ 1.09
PTCHD3-202ENST00000622555 CHRNA5P30532 468 aa21.86■■□□□ 1.09
PTCHD3-202ENST00000622555 ZNF622Q969S3 477 aaKnown RBP eCLIP21.86■■□□□ 1.09
PTCHD3-202ENST00000622555 NEUROD6Q96NK8 337 aa21.86■■□□□ 1.09
PTCHD3-202ENST00000622555 SGIP1Q9BQI5 828 aa21.86■■□□□ 1.09
PTCHD3-202ENST00000622555 TLR7Q9NYK1 1049 aaKnown RBP21.86■■□□□ 1.09
PTCHD3-202ENST00000622555 A0A1B0GUL7 405 aa21.85■■□□□ 1.09
PTCHD3-202ENST00000622555 ALDH1B1P30837 517 aa21.85■■□□□ 1.09
PTCHD3-202ENST00000622555 TIMM10P62072 90 aa21.85■■□□□ 1.09
PTCHD3-202ENST00000622555 ATP2B3Q16720 1220 aa21.85■■□□□ 1.09
PTCHD3-202ENST00000622555 TSHZ3Q63HK5 1081 aa21.85■■□□□ 1.09
PTCHD3-202ENST00000622555 DLEC1Q9Y238 1755 aa21.85■■□□□ 1.09
PTCHD3-202ENST00000622555 PUM3Q15397 648 aaKnown RBP21.84■■□□□ 1.09
PTCHD3-202ENST00000622555 STYK1Q6J9G0 422 aa21.84■■□□□ 1.09
PTCHD3-202ENST00000622555 GPATCH3Q96I76 525 aa21.84■■□□□ 1.09
PTCHD3-202ENST00000622555 STAP2Q9UGK3 403 aa21.84■■□□□ 1.09
PTCHD3-202ENST00000622555 PTGER2P43116 358 aa21.83■■□□□ 1.09
PTCHD3-202ENST00000622555 DBNDD2Q9BQY9 259 aa21.83■■□□□ 1.09
PTCHD3-202ENST00000622555 OSBPL3Q9H4L5 887 aa21.83■■□□□ 1.09
PTCHD3-202ENST00000622555 DBNLQ9UJU6 430 aaKnown RBP21.83■■□□□ 1.09
PTCHD3-202ENST00000622555 RBM19Q9Y4C8 960 aaKnown RBP21.83■■□□□ 1.09
PTCHD3-202ENST00000622555 PPEF1O14829 653 aaPredicted RBP21.83■■□□□ 1.08
PTCHD3-202ENST00000622555 ANKRD2Q9GZV1 360 aa21.83■■□□□ 1.08
PTCHD3-202ENST00000622555 ARAP2Q8WZ64 1704 aa21.83■■□□□ 1.08
PTCHD3-202ENST00000622555 TMC4Q7Z404 712 aa21.82■■□□□ 1.08
PTCHD3-202ENST00000622555 SPON1Q9HCB6 807 aa21.82■■□□□ 1.08
PTCHD3-202ENST00000622555 ECHDC1Q9NTX5 307 aa21.82■■□□□ 1.08
PTCHD3-202ENST00000622555 LRRC37AA6NMS7 1700 aa21.81■■□□□ 1.08
PTCHD3-202ENST00000622555 AOX1Q06278 1338 aa21.81■■□□□ 1.08
PTCHD3-202ENST00000622555 TTC41PQ6P2S7 1318 aa21.81■■□□□ 1.08
PTCHD3-202ENST00000622555 LPIN2Q92539 896 aa21.81■■□□□ 1.08
PTCHD3-202ENST00000622555 SLX4Q8IY92 1834 aa21.81■■□□□ 1.08
PTCHD3-202ENST00000622555 SLC5A1P13866 664 aa21.8■■□□□ 1.08
PTCHD3-202ENST00000622555 FGFR2P21802 821 aa21.8■■□□□ 1.08
PTCHD3-202ENST00000622555 TTC22Q5TAA0 569 aa21.8■■□□□ 1.08
PTCHD3-202ENST00000622555 SLC51AQ86UW1 340 aa21.8■■□□□ 1.08
PTCHD3-202ENST00000622555 CNKSR1Q969H4 720 aa21.8■■□□□ 1.08
PTCHD3-202ENST00000622555 XAGE2Q96GT9 111 aa21.8■■□□□ 1.08
PTCHD3-202ENST00000622555 PPP1R1BQ9UD71 204 aaPredicted RBP21.8■■□□□ 1.08
PTCHD3-202ENST00000622555 SNAP23O00161 211 aa21.8■■□□□ 1.08
PTCHD3-202ENST00000622555 ADORA1P30542 326 aa21.8■■□□□ 1.08
PTCHD3-202ENST00000622555 GORABQ5T7V8 394 aa21.8■■□□□ 1.08
PTCHD3-202ENST00000622555 KLHL34Q8N239 644 aa21.8■■□□□ 1.08
PTCHD3-202ENST00000622555 ANKIB1Q9P2G1 1089 aa21.8■■□□□ 1.08
PTCHD3-202ENST00000622555 KIAA1551Q9HCM1 1747 aa21.79■■□□□ 1.08
PTCHD3-202ENST00000622555 ERC2O15083 957 aa21.79■■□□□ 1.08
PTCHD3-202ENST00000622555 IFIT1P09914 478 aaKnown RBP21.79■■□□□ 1.08
PTCHD3-202ENST00000622555 DPEP1P16444 411 aa21.79■■□□□ 1.08
PTCHD3-202ENST00000622555 KCNJ4P48050 445 aa21.79■■□□□ 1.08
PTCHD3-202ENST00000622555 A0A0G2JLW4 131 aa21.78■■□□□ 1.08
PTCHD3-202ENST00000622555 UBE4AQ14139 1066 aa21.78■■□□□ 1.08
PTCHD3-202ENST00000622555 PRPF40BQ6NWY9 871 aaKnown RBP21.78■■□□□ 1.08
PTCHD3-202ENST00000622555 SP8Q8IXZ3 490 aa21.78■■□□□ 1.08
PTCHD3-202ENST00000622555 PI4K2BQ8TCG2 481 aa21.78■■□□□ 1.08
PTCHD3-202ENST00000622555 ATP6V0A2Q9Y487 856 aa21.78■■□□□ 1.08
PTCHD3-202ENST00000622555 XDHP47989 1333 aa21.78■■□□□ 1.08
PTCHD3-202ENST00000622555 TGFB2P61812 414 aa21.77■■□□□ 1.08
PTCHD3-202ENST00000622555 BMP2KLQ5H9B9 411 aa21.77■■□□□ 1.08
PTCHD3-202ENST00000622555 GLRX3O76003 335 aaKnown RBP21.77■■□□□ 1.08
PTCHD3-202ENST00000622555 GSPT1P15170 499 aaKnown RBP21.77■■□□□ 1.08
PTCHD3-202ENST00000622555 GPSM2P81274 684 aa21.77■■□□□ 1.08
PTCHD3-202ENST00000622555 TMX4Q9H1E5 349 aaPredicted RBP21.77■■□□□ 1.08
PTCHD3-202ENST00000622555 CD2APQ9Y5K6 639 aa21.77■■□□□ 1.08
PTCHD3-202ENST00000622555 AK9Q5TCS8 1911 aa21.76■■□□□ 1.07
PTCHD3-202ENST00000622555 CCDC158Q5M9N0 1113 aa21.76■■□□□ 1.07
PTCHD3-202ENST00000622555 NSFL1CQ9UNZ2 370 aaKnown RBP21.76■■□□□ 1.07
PTCHD3-202ENST00000622555 WTIPA6NIX2 430 aaPredicted RBP21.75■■□□□ 1.07
PTCHD3-202ENST00000622555 ZNF804BA4D1E1 1349 aa21.75■■□□□ 1.07
PTCHD3-202ENST00000622555 ATP5JP18859 108 aa21.75■■□□□ 1.07
PTCHD3-202ENST00000622555 KCNA3P22001 575 aa21.75■■□□□ 1.07
PTCHD3-202ENST00000622555 TTC39AQ5SRH9 613 aa21.75■■□□□ 1.07
PTCHD3-202ENST00000622555 TTLL6Q8N841 843 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms