RNA–Protein interactions for RNA: ENST00000622320.4

RRP12-215, Transcript of ribosomal RNA processing 12 homolog, human

TSL 4

Gene RRP12, Length 543 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RRP12-215	ENST00000622320	PITPNM2	Q9BZ72	1349 aa		13.66	□□□□□ -0.22
RRP12-215	ENST00000622320	DLG5	Q8TDM6	1919 aa		13.66	□□□□□ -0.22
RRP12-215	ENST00000622320	DOK7	Q18PE1	504 aa		13.66	□□□□□ -0.22
RRP12-215	ENST00000622320	OTOP1	Q7RTM1	612 aa		13.66	□□□□□ -0.22
RRP12-215	ENST00000622320	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.66	□□□□□ -0.22
RRP12-215	ENST00000622320	ERBB4	Q15303	1308 aa		13.65	□□□□□ -0.22
RRP12-215	ENST00000622320	C6orf229	H3BNL8	230 aa		13.65	□□□□□ -0.22
RRP12-215	ENST00000622320	HTATSF1	O43719	755 aa	Known RBP	13.65	□□□□□ -0.22
RRP12-215	ENST00000622320	EN2	P19622	333 aa	Predicted RBP	13.65	□□□□□ -0.22
RRP12-215	ENST00000622320	ZNF280A	P59817	542 aa	Predicted RBP	13.65	□□□□□ -0.22
RRP12-215	ENST00000622320	SCARF1	Q14162	830 aa		13.65	□□□□□ -0.22
RRP12-215	ENST00000622320	VIL1	P09327	827 aa	Known RBP	13.64	□□□□□ -0.23
RRP12-215	ENST00000622320	TTLL12	Q14166	644 aa	Predicted RBP	13.64	□□□□□ -0.23
RRP12-215	ENST00000622320	EYA3	Q99504	573 aa		13.64	□□□□□ -0.23
RRP12-215	ENST00000622320	POLL	Q9UGP5	575 aa		13.64	□□□□□ -0.23
RRP12-215	ENST00000622320	BRCA2	P51587	3418 aa		13.64	□□□□□ -0.23
RRP12-215	ENST00000622320	SH3TC1	Q8TE82	1336 aa		13.64	□□□□□ -0.23
RRP12-215	ENST00000622320	EIF4A1	P60842	406 aa	Known RBP	13.63	□□□□□ -0.23
RRP12-215	ENST00000622320	GPSM2	P81274	684 aa		13.63	□□□□□ -0.23
RRP12-215	ENST00000622320	NLRP10	Q86W26	655 aa		13.63	□□□□□ -0.23
RRP12-215	ENST00000622320	ARMC5	Q96C12	935 aa		13.63	□□□□□ -0.23
RRP12-215	ENST00000622320	SCAF8	Q9UPN6	1271 aa	Known RBP	13.63	□□□□□ -0.23
RRP12-215	ENST00000622320	ALDH1A1	P00352	501 aa		13.62	□□□□□ -0.23
RRP12-215	ENST00000622320	PRAMEF18	Q5VWM3	479 aa		13.62	□□□□□ -0.23
RRP12-215	ENST00000622320	LRP10	Q7Z4F1	713 aa		13.62	□□□□□ -0.23
RRP12-215	ENST00000622320	SLC17A8	Q8NDX2	589 aa		13.62	□□□□□ -0.23
RRP12-215	ENST00000622320	AGBL3	Q8NEM8	1001 aa		13.62	□□□□□ -0.23
RRP12-215	ENST00000622320	PNISR	Q8TF01	805 aa	Known RBP	13.62	□□□□□ -0.23
RRP12-215	ENST00000622320	CELF1	Q92879	486 aa	Known RBP	13.62	□□□□□ -0.23
RRP12-215	ENST00000622320	THUMPD2	Q9BTF0	503 aa	Known RBP	13.62	□□□□□ -0.23
RRP12-215	ENST00000622320	SZT2	Q5T011	3432 aa		13.62	□□□□□ -0.23
RRP12-215	ENST00000622320	CENPF	P49454	3210 aa		13.61	□□□□□ -0.23
RRP12-215	ENST00000622320	CEP290	O15078	2479 aa		13.61	□□□□□ -0.23
RRP12-215	ENST00000622320	TCIRG1	Q13488	830 aa		13.61	□□□□□ -0.23
RRP12-215	ENST00000622320	CNGB1	Q14028	1251 aa	Predicted RBP	13.61	□□□□□ -0.23
RRP12-215	ENST00000622320	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.61	□□□□□ -0.23
RRP12-215	ENST00000622320	CFAP53	Q96M91	514 aa		13.61	□□□□□ -0.23
RRP12-215	ENST00000622320	MYOZ2	Q9NPC6	264 aa		13.61	□□□□□ -0.23
RRP12-215	ENST00000622320	TRMT112	Q9UI30	125 aa	Known RBP	13.61	□□□□□ -0.23
RRP12-215	ENST00000622320	PTPN22	Q9Y2R2	807 aa		13.61	□□□□□ -0.23
RRP12-215	ENST00000622320	ZNF646	O15015	1829 aa	Predicted RBP	13.61	□□□□□ -0.23
RRP12-215	ENST00000622320		H0YGN5	161 aa		13.6	□□□□□ -0.23
RRP12-215	ENST00000622320	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.6	□□□□□ -0.23
RRP12-215	ENST00000622320	NF2	P35240	595 aa		13.6	□□□□□ -0.23
RRP12-215	ENST00000622320	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
RRP12-215	ENST00000622320	HSP90AB3P	Q58FF7	597 aa		13.6	□□□□□ -0.23
RRP12-215	ENST00000622320	TBC1D16	Q8TBP0	767 aa		13.6	□□□□□ -0.23
RRP12-215	ENST00000622320	OTUD5	Q96G74	571 aa		13.6	□□□□□ -0.23
RRP12-215	ENST00000622320	ERO1A	Q96HE7	468 aa		13.6	□□□□□ -0.23
RRP12-215	ENST00000622320		G3V3G9	751 aa		13.59	□□□□□ -0.23
RRP12-215	ENST00000622320	PTPN12	Q05209	780 aa	Known RBP	13.59	□□□□□ -0.23
RRP12-215	ENST00000622320	DCAF8	Q5TAQ9	597 aa		13.59	□□□□□ -0.23
RRP12-215	ENST00000622320	SPRYD7	Q5W111	196 aa		13.59	□□□□□ -0.23
RRP12-215	ENST00000622320	CHRDL2	Q6WN34	429 aa		13.59	□□□□□ -0.23
RRP12-215	ENST00000622320	CD99L2	Q8TCZ2	262 aa		13.59	□□□□□ -0.23
RRP12-215	ENST00000622320	NECTIN2	Q92692	538 aa		13.59	□□□□□ -0.23
RRP12-215	ENST00000622320	NUDC	Q9Y266	331 aa		13.59	□□□□□ -0.23
RRP12-215	ENST00000622320	UFL1	O94874	794 aa		13.58	□□□□□ -0.24
RRP12-215	ENST00000622320	ANXA1	P04083	346 aa		13.58	□□□□□ -0.24
RRP12-215	ENST00000622320	USP17L8	P0C7I0	530 aa		13.58	□□□□□ -0.24
RRP12-215	ENST00000622320	PDIA6	Q15084	440 aa		13.58	□□□□□ -0.24
RRP12-215	ENST00000622320	PROSER3	Q2NL68	480 aa		13.58	□□□□□ -0.24
RRP12-215	ENST00000622320	GML	Q99445	158 aa		13.58	□□□□□ -0.24
RRP12-215	ENST00000622320	TMEM106C	Q9BVX2	250 aa		13.58	□□□□□ -0.24
RRP12-215	ENST00000622320	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.58	□□□□□ -0.24
RRP12-215	ENST00000622320	MANSC4	A6NHS7	340 aa	Predicted RBP	13.57	□□□□□ -0.24
RRP12-215	ENST00000622320	ARMC9	Q7Z3E5	817 aa		13.57	□□□□□ -0.24
RRP12-215	ENST00000622320	IFNL1	Q8IU54	200 aa		13.57	□□□□□ -0.24
RRP12-215	ENST00000622320	ZNF428	Q96B54	188 aa		13.57	□□□□□ -0.24
RRP12-215	ENST00000622320	ZNF333	Q96JL9	665 aa		13.57	□□□□□ -0.24
RRP12-215	ENST00000622320	CUL9	Q8IWT3	2517 aa		13.57	□□□□□ -0.24
RRP12-215	ENST00000622320	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
RRP12-215	ENST00000622320	PRKG1	Q13976	671 aa		13.56	□□□□□ -0.24
RRP12-215	ENST00000622320	SF3B3	Q15393	1217 aa	Known RBP	13.56	□□□□□ -0.24
RRP12-215	ENST00000622320	NBPF9	Q3BBW0	867 aa		13.56	□□□□□ -0.24
RRP12-215	ENST00000622320	EFCC1	Q9HA90	598 aa		13.56	□□□□□ -0.24
RRP12-215	ENST00000622320	PODXL2	Q9NZ53	605 aa		13.55	□□□□□ -0.24
RRP12-215	ENST00000622320	RBM27	Q9P2N5	1060 aa	Known RBP	13.55	□□□□□ -0.24
RRP12-215	ENST00000622320	COL1A1	P02452	1464 aa	Predicted RBP	13.55	□□□□□ -0.24
RRP12-215	ENST00000622320	EIF2S2	P20042	333 aa	Known RBP	13.54	□□□□□ -0.24
RRP12-215	ENST00000622320	INHBE	P58166	350 aa		13.54	□□□□□ -0.24
RRP12-215	ENST00000622320	CAP1	Q01518	475 aa		13.54	□□□□□ -0.24
RRP12-215	ENST00000622320	AIMP1	Q12904	312 aa	Known RBP	13.54	□□□□□ -0.24
RRP12-215	ENST00000622320	CRHR2	Q13324	411 aa		13.54	□□□□□ -0.24
RRP12-215	ENST00000622320	LDLRAD1	Q5T700	205 aa		13.54	□□□□□ -0.24
RRP12-215	ENST00000622320	XAGE3	Q8WTP9	111 aa		13.54	□□□□□ -0.24
RRP12-215	ENST00000622320	GGA1	Q9UJY5	639 aa		13.54	□□□□□ -0.24
RRP12-215	ENST00000622320	ANGEL1	Q9UNK9	670 aa	Known RBP	13.54	□□□□□ -0.24
RRP12-215	ENST00000622320	SSC5D	A1L4H1	1573 aa		13.54	□□□□□ -0.24
RRP12-215	ENST00000622320	USP17L3	A6NCW0	530 aa		13.53	□□□□□ -0.24
RRP12-215	ENST00000622320	USP17L4	A6NCW7	530 aa		13.53	□□□□□ -0.24
RRP12-215	ENST00000622320	WNT10B	O00744	389 aa		13.53	□□□□□ -0.24
RRP12-215	ENST00000622320	ZBTB48	P10074	688 aa	Predicted RBP	13.53	□□□□□ -0.24
RRP12-215	ENST00000622320	SLC4A8	Q2Y0W8	1093 aa		13.53	□□□□□ -0.24
RRP12-215	ENST00000622320	SLC9C1	Q4G0N8	1177 aa		13.53	□□□□□ -0.24
RRP12-215	ENST00000622320	COPS6	Q7L5N1	327 aa		13.53	□□□□□ -0.24
RRP12-215	ENST00000622320	USP17L1	Q7RTZ2	530 aa		13.53	□□□□□ -0.24
RRP12-215	ENST00000622320	ANKIB1	Q9P2G1	1089 aa		13.53	□□□□□ -0.24
RRP12-215	ENST00000622320	SASH1	O94885	1247 aa		13.52	□□□□□ -0.25
RRP12-215	ENST00000622320	RPS8	P62241	208 aa	Known RBP	13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms