RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 CUL9Q8IWT3 2517 aa19.42■□□□□ 0.7
SNX12-206ENST00000622259 COL6A3P12111 3177 aa19.41■□□□□ 0.7
SNX12-206ENST00000622259 PER1O15534 1290 aaPredicted RBP19.41■□□□□ 0.7
SNX12-206ENST00000622259 VIL1P09327 827 aaKnown RBP19.41■□□□□ 0.7
SNX12-206ENST00000622259 INTS3Q68E01 1043 aaKnown RBP19.41■□□□□ 0.7
SNX12-206ENST00000622259 LRP10Q7Z4F1 713 aa19.4■□□□□ 0.7
SNX12-206ENST00000622259 OTUD5Q96G74 571 aa19.4■□□□□ 0.7
SNX12-206ENST00000622259 THUMPD2Q9BTF0 503 aaKnown RBP19.4■□□□□ 0.7
SNX12-206ENST00000622259 NSFL1CQ9UNZ2 370 aaKnown RBP19.4■□□□□ 0.7
SNX12-206ENST00000622259 SLC17A8Q8NDX2 589 aa19.39■□□□□ 0.69
SNX12-206ENST00000622259 C6orf229H3BNL8 230 aa19.38■□□□□ 0.69
SNX12-206ENST00000622259 ZNF280AP59817 542 aaPredicted RBP19.38■□□□□ 0.69
SNX12-206ENST00000622259 EIF4A1P60842 406 aaKnown RBP19.38■□□□□ 0.69
SNX12-206ENST00000622259 GPSM2P81274 684 aa19.38■□□□□ 0.69
SNX12-206ENST00000622259 CNGB1Q14028 1251 aaPredicted RBP19.38■□□□□ 0.69
SNX12-206ENST00000622259 KDM3BQ7LBC6 1761 aa19.38■□□□□ 0.69
SNX12-206ENST00000622259 CELF1Q92879 486 aaKnown RBP19.37■□□□□ 0.69
SNX12-206ENST00000622259 ZNF428Q96B54 188 aa19.37■□□□□ 0.69
SNX12-206ENST00000622259 DDX60Q8IY21 1712 aaKnown RBP19.37■□□□□ 0.69
SNX12-206ENST00000622259 SREBF2Q12772 1141 aa19.36■□□□□ 0.69
SNX12-206ENST00000622259 NLRP10Q86W26 655 aa19.36■□□□□ 0.69
SNX12-206ENST00000622259 H0YGN5 161 aa19.35■□□□□ 0.69
SNX12-206ENST00000622259 CAP1Q01518 475 aa19.35■□□□□ 0.69
SNX12-206ENST00000622259 TMC4Q7Z404 712 aa19.35■□□□□ 0.69
SNX12-206ENST00000622259 ARMC5Q96C12 935 aa19.35■□□□□ 0.69
SNX12-206ENST00000622259 PTPN22Q9Y2R2 807 aa19.35■□□□□ 0.69
SNX12-206ENST00000622259 PITPNM2Q9BZ72 1349 aa19.34■□□□□ 0.69
SNX12-206ENST00000622259 HTATSF1O43719 755 aaKnown RBP19.34■□□□□ 0.69
SNX12-206ENST00000622259 ANXA1P04083 346 aa19.34■□□□□ 0.69
SNX12-206ENST00000622259 PTPN12Q05209 780 aaKnown RBP19.34■□□□□ 0.69
SNX12-206ENST00000622259 TTLL12Q14166 644 aaPredicted RBP19.34■□□□□ 0.69
SNX12-206ENST00000622259 PDIA6Q15084 440 aa19.34■□□□□ 0.69
SNX12-206ENST00000622259 PROSER3Q2NL68 480 aa19.34■□□□□ 0.69
SNX12-206ENST00000622259 TBC1D16Q8TBP0 767 aa19.34■□□□□ 0.69
SNX12-206ENST00000622259 MYOZ2Q9NPC6 264 aa19.33■□□□□ 0.68
SNX12-206ENST00000622259 TRMT112Q9UI30 125 aaKnown RBP19.33■□□□□ 0.68
SNX12-206ENST00000622259 RSBN1LQ6PCB5 846 aaPredicted RBP19.32■□□□□ 0.68
SNX12-206ENST00000622259 CHRDL2Q6WN34 429 aa19.32■□□□□ 0.68
SNX12-206ENST00000622259 CD99L2Q8TCZ2 262 aa19.32■□□□□ 0.68
SNX12-206ENST00000622259 GMLQ99445 158 aa19.32■□□□□ 0.68
SNX12-206ENST00000622259 EYA3Q99504 573 aa19.32■□□□□ 0.68
SNX12-206ENST00000622259 TIMELESSQ9UNS1 1208 aa19.32■□□□□ 0.68
SNX12-206ENST00000622259 SH3TC1Q8TE82 1336 aa19.31■□□□□ 0.68
SNX12-206ENST00000622259 NBPF9Q3BBW0 867 aa19.31■□□□□ 0.68
SNX12-206ENST00000622259 SPRYD7Q5W111 196 aa19.31■□□□□ 0.68
SNX12-206ENST00000622259 AGBL3Q8NEM8 1001 aa19.31■□□□□ 0.68
SNX12-206ENST00000622259 ZNF609O15014 1411 aa19.31■□□□□ 0.68
SNX12-206ENST00000622259 PRKG1Q13976 671 aa19.3■□□□□ 0.68
SNX12-206ENST00000622259 RBM27Q9P2N5 1060 aaKnown RBP19.3■□□□□ 0.68
SNX12-206ENST00000622259 ERBB4Q15303 1308 aa19.29■□□□□ 0.68
SNX12-206ENST00000622259 IGF2BP3O00425 579 aaKnown RBP eCLIP19.29■□□□□ 0.68
SNX12-206ENST00000622259 U2AF1L5P0DN76 240 aaPredicted RBP19.29■□□□□ 0.68
SNX12-206ENST00000622259 U2AF1Q01081 240 aaKnown RBP eCLIP19.29■□□□□ 0.68
SNX12-206ENST00000622259 IFNL1Q8IU54 200 aa19.29■□□□□ 0.68
SNX12-206ENST00000622259 FZD1Q9UP38 647 aa19.29■□□□□ 0.68
SNX12-206ENST00000622259 PSME4Q14997 1843 aa19.29■□□□□ 0.68
SNX12-206ENST00000622259 LAMA3Q16787 3333 aa19.28■□□□□ 0.68
SNX12-206ENST00000622259 ALDH1A1P00352 501 aa19.28■□□□□ 0.68
SNX12-206ENST00000622259 USP17L8P0C7I0 530 aa19.28■□□□□ 0.68
SNX12-206ENST00000622259 PNISRQ8TF01 805 aaKnown RBP19.28■□□□□ 0.68
SNX12-206ENST00000622259 ZNF333Q96JL9 665 aa19.28■□□□□ 0.68
SNX12-206ENST00000622259 ZC3H12CQ9C0D7 883 aaKnown RBP19.28■□□□□ 0.68
SNX12-206ENST00000622259 LDLRAD1Q5T700 205 aa19.27■□□□□ 0.68
SNX12-206ENST00000622259 DLG5Q8TDM6 1919 aa19.26■□□□□ 0.67
SNX12-206ENST00000622259 EIF2S2P20042 333 aaKnown RBP19.26■□□□□ 0.67
SNX12-206ENST00000622259 TCIRG1Q13488 830 aa19.26■□□□□ 0.67
SNX12-206ENST00000622259 SF3B3Q15393 1217 aaKnown RBP19.26■□□□□ 0.67
SNX12-206ENST00000622259 ERO1AQ96HE7 468 aa19.26■□□□□ 0.67
SNX12-206ENST00000622259 TMEM106CQ9BVX2 250 aa19.26■□□□□ 0.67
SNX12-206ENST00000622259 EFCC1Q9HA90 598 aa19.26■□□□□ 0.67
SNX12-206ENST00000622259 AIMP1Q12904 312 aaKnown RBP19.25■□□□□ 0.67
SNX12-206ENST00000622259 HSP90AB3PQ58FF7 597 aa19.25■□□□□ 0.67
SNX12-206ENST00000622259 COPS6Q7L5N1 327 aa19.25■□□□□ 0.67
SNX12-206ENST00000622259 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.25■□□□□ 0.67
SNX12-206ENST00000622259 G3V3G9 751 aa19.24■□□□□ 0.67
SNX12-206ENST00000622259 UFL1O94874 794 aa19.24■□□□□ 0.67
SNX12-206ENST00000622259 DCAF8Q5TAQ9 597 aa19.24■□□□□ 0.67
SNX12-206ENST00000622259 XAGE3Q8WTP9 111 aa19.24■□□□□ 0.67
SNX12-206ENST00000622259 FAM89AQ96GI7 184 aa19.24■□□□□ 0.67
SNX12-206ENST00000622259 MXD3Q9BW11 206 aa19.24■□□□□ 0.67
SNX12-206ENST00000622259 PODXL2Q9NZ53 605 aa19.24■□□□□ 0.67
SNX12-206ENST00000622259 MANSC4A6NHS7 340 aaPredicted RBP19.23■□□□□ 0.67
SNX12-206ENST00000622259 WNT10BO00744 389 aa19.23■□□□□ 0.67
SNX12-206ENST00000622259 NF2P35240 595 aa19.23■□□□□ 0.67
SNX12-206ENST00000622259 CRHR2Q13324 411 aa19.23■□□□□ 0.67
SNX12-206ENST00000622259 ARMC9Q7Z3E5 817 aa19.23■□□□□ 0.67
SNX12-206ENST00000622259 NECTIN2Q92692 538 aa19.23■□□□□ 0.67
SNX12-206ENST00000622259 ANGEL1Q9UNK9 670 aaKnown RBP19.23■□□□□ 0.67
SNX12-206ENST00000622259 NUDCQ9Y266 331 aa19.23■□□□□ 0.67
SNX12-206ENST00000622259 MYCP01106 439 aaPredicted RBP19.22■□□□□ 0.67
SNX12-206ENST00000622259 RPS8P62241 208 aaKnown RBP19.22■□□□□ 0.67
SNX12-206ENST00000622259 CFAP53Q96M91 514 aa19.22■□□□□ 0.67
SNX12-206ENST00000622259 INHBEP58166 350 aa19.21■□□□□ 0.67
SNX12-206ENST00000622259 RTL5Q5HYW3 569 aaPredicted RBP19.21■□□□□ 0.67
SNX12-206ENST00000622259 CLMNQ96JQ2 1002 aa19.21■□□□□ 0.67
SNX12-206ENST00000622259 PRO3102Q9H379 93 aa19.21■□□□□ 0.67
SNX12-206ENST00000622259 PTCH2Q9Y6C5 1203 aa19.21■□□□□ 0.67
SNX12-206ENST00000622259 LAMB1P07942 1786 aa19.2■□□□□ 0.66
SNX12-206ENST00000622259 USP17L3A6NCW0 530 aa19.2■□□□□ 0.66
SNX12-206ENST00000622259 USP17L4A6NCW7 530 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms