RNA–Protein interactions for RNA: ENST00000622132.4

ABCB1-211, Transcript of ATP binding cassette subfamily B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCB1, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-211ENST00000622132 UPF3BQ9BZI7 483 aaKnown RBP10.2□□□□□ -0.78
ABCB1-211ENST00000622132 MKNK2Q9HBH9 465 aa10.2□□□□□ -0.78
ABCB1-211ENST00000622132 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.2□□□□□ -0.78
ABCB1-211ENST00000622132 ZNF213O14771 459 aa10.2□□□□□ -0.78
ABCB1-211ENST00000622132 HIBADHP31937 336 aaKnown RBP10.2□□□□□ -0.78
ABCB1-211ENST00000622132 DNTTIP2Q5QJE6 756 aaKnown RBP10.2□□□□□ -0.78
ABCB1-211ENST00000622132 XAGE2Q96GT9 111 aa10.2□□□□□ -0.78
ABCB1-211ENST00000622132 ZNF287Q9HBT7 754 aa10.2□□□□□ -0.78
ABCB1-211ENST00000622132 MROH5Q6ZUA9 1318 aa10.2□□□□□ -0.78
ABCB1-211ENST00000622132 ADRA2BP18089 450 aa10.2□□□□□ -0.78
ABCB1-211ENST00000622132 ARHGEF1Q92888 912 aaKnown RBP10.2□□□□□ -0.78
ABCB1-211ENST00000622132 TRIM44Q96DX7 344 aaPredicted RBP10.2□□□□□ -0.78
ABCB1-211ENST00000622132 COL15A1P39059 1388 aa10.2□□□□□ -0.78
ABCB1-211ENST00000622132 KNDC1Q76NI1 1749 aa10.2□□□□□ -0.78
ABCB1-211ENST00000622132 KIF20BQ96Q89 1820 aa10.19□□□□□ -0.78
ABCB1-211ENST00000622132 GSTO1P78417 241 aa10.19□□□□□ -0.78
ABCB1-211ENST00000622132 RRP9O43818 475 aaKnown RBP10.19□□□□□ -0.78
ABCB1-211ENST00000622132 KDM4AO75164 1064 aa10.19□□□□□ -0.78
ABCB1-211ENST00000622132 CASTP20810 708 aaKnown RBP10.19□□□□□ -0.78
ABCB1-211ENST00000622132 ERFEQ4G0M1 354 aa10.19□□□□□ -0.78
ABCB1-211ENST00000622132 SUSD4Q5VX71 490 aa10.19□□□□□ -0.78
ABCB1-211ENST00000622132 C2CD5Q86YS7 1000 aa10.19□□□□□ -0.78
ABCB1-211ENST00000622132 PDRG1Q9NUG6 133 aa10.19□□□□□ -0.78
ABCB1-211ENST00000622132 CCDC69A6NI79 296 aa10.19□□□□□ -0.78
ABCB1-211ENST00000622132 IGKV5-2P06315 115 aa10.19□□□□□ -0.78
ABCB1-211ENST00000622132 MMP10P09238 476 aa10.19□□□□□ -0.78
ABCB1-211ENST00000622132 STK3Q13188 491 aa10.19□□□□□ -0.78
ABCB1-211ENST00000622132 SAFBQ15424 915 aaKnown RBP eCLIP10.19□□□□□ -0.78
ABCB1-211ENST00000622132 PLCB2Q00722 1185 aa10.19□□□□□ -0.78
ABCB1-211ENST00000622132 NUP133Q8WUM0 1156 aa10.19□□□□□ -0.78
ABCB1-211ENST00000622132 IQSEC2Q5JU85 1478 aa10.19□□□□□ -0.78
ABCB1-211ENST00000622132 PTMSP20962 102 aa10.18□□□□□ -0.78
ABCB1-211ENST00000622132 LRRC24Q50LG9 513 aa10.18□□□□□ -0.78
ABCB1-211ENST00000622132 CRNKL1Q9BZJ0 848 aaKnown RBP10.18□□□□□ -0.78
ABCB1-211ENST00000622132 COPRSQ9NQ92 184 aa10.18□□□□□ -0.78
ABCB1-211ENST00000622132 DENND2AQ9ULE3 1009 aa10.18□□□□□ -0.78
ABCB1-211ENST00000622132 COL3A1P02461 1466 aaPredicted RBP10.18□□□□□ -0.78
ABCB1-211ENST00000622132 GSE1Q14687 1217 aa10.18□□□□□ -0.78
ABCB1-211ENST00000622132 MPNDQ8N594 471 aa10.18□□□□□ -0.78
ABCB1-211ENST00000622132 CHMP5Q9NZZ3 219 aa10.18□□□□□ -0.78
ABCB1-211ENST00000622132 HDAC9Q9UKV0 1011 aa10.18□□□□□ -0.78
ABCB1-211ENST00000622132 ATF5Q9Y2D1 282 aaPredicted RBP10.18□□□□□ -0.78
ABCB1-211ENST00000622132 XRN1Q8IZH2 1706 aaKnown RBP10.18□□□□□ -0.78
ABCB1-211ENST00000622132 FMN2Q9NZ56 1722 aa10.18□□□□□ -0.78
ABCB1-211ENST00000622132 XBP1P17861 261 aa10.18□□□□□ -0.78
ABCB1-211ENST00000622132 RANBP6O60518 1105 aaKnown RBP10.17□□□□□ -0.78
ABCB1-211ENST00000622132 LDHBP07195 334 aaKnown RBP10.17□□□□□ -0.78
ABCB1-211ENST00000622132 HAND2P61296 217 aa10.17□□□□□ -0.78
ABCB1-211ENST00000622132 MCMDC2Q4G0Z9 681 aa10.17□□□□□ -0.78
ABCB1-211ENST00000622132 SMIM5Q71RC9 77 aa10.17□□□□□ -0.78
ABCB1-211ENST00000622132 CCDC34Q96HJ3 373 aa10.17□□□□□ -0.78
ABCB1-211ENST00000622132 ZNF142P52746 1687 aaPredicted RBP10.17□□□□□ -0.78
ABCB1-211ENST00000622132 MPHOSPH10O00566 681 aaKnown RBP10.17□□□□□ -0.78
ABCB1-211ENST00000622132 CNKSR1Q969H4 720 aa10.17□□□□□ -0.78
ABCB1-211ENST00000622132 RNF41Q9H4P4 317 aaPredicted RBP10.17□□□□□ -0.78
ABCB1-211ENST00000622132 ZNF444Q8N0Y2 327 aaPredicted RBP10.17□□□□□ -0.78
ABCB1-211ENST00000622132 SEC31BQ9NQW1 1179 aa10.17□□□□□ -0.78
ABCB1-211ENST00000622132 H7C1W4 665 aa10.17□□□□□ -0.78
ABCB1-211ENST00000622132 MYO1BO43795 1136 aa10.17□□□□□ -0.78
ABCB1-211ENST00000622132 NUCB2P80303 420 aa10.17□□□□□ -0.78
ABCB1-211ENST00000622132 ITPK1Q13572 414 aa10.17□□□□□ -0.78
ABCB1-211ENST00000622132 LARGE2Q8N3Y3 721 aa10.17□□□□□ -0.78
ABCB1-211ENST00000622132 PUS3Q9BZE2 481 aaKnown RBP10.17□□□□□ -0.78
ABCB1-211ENST00000622132 FBXO3Q9UK99 471 aa10.17□□□□□ -0.78
ABCB1-211ENST00000622132 BCS1LQ9Y276 419 aa10.17□□□□□ -0.78
ABCB1-211ENST00000622132 MYOM1P52179 1685 aa10.16□□□□□ -0.78
ABCB1-211ENST00000622132 EIF5P55010 431 aaKnown RBP10.16□□□□□ -0.78
ABCB1-211ENST00000622132 MAGEB6Q8N7X4 407 aa10.16□□□□□ -0.78
ABCB1-211ENST00000622132 EAF2Q96CJ1 260 aaPredicted RBP10.16□□□□□ -0.78
ABCB1-211ENST00000622132 ESYT1Q9BSJ8 1104 aa10.16□□□□□ -0.78
ABCB1-211ENST00000622132 CHD2O14647 1828 aaKnown RBP10.16□□□□□ -0.78
ABCB1-211ENST00000622132 RNF113AO15541 343 aaKnown RBP10.16□□□□□ -0.78
ABCB1-211ENST00000622132 SSFA2P28290 1259 aa10.16□□□□□ -0.78
ABCB1-211ENST00000622132 NMIQ13287 307 aaPredicted RBP10.16□□□□□ -0.78
ABCB1-211ENST00000622132 SLC4A8Q2Y0W8 1093 aa10.16□□□□□ -0.78
ABCB1-211ENST00000622132 RC3H1Q5TC82 1133 aaKnown RBP10.16□□□□□ -0.78
ABCB1-211ENST00000622132 SLC4A4Q9Y6R1 1079 aa10.16□□□□□ -0.78
ABCB1-211ENST00000622132 IQCA1Q86XH1 822 aa10.16□□□□□ -0.78
ABCB1-211ENST00000622132 CWC22Q9HCG8 908 aaKnown RBP10.16□□□□□ -0.78
ABCB1-211ENST00000622132 PXDNQ92626 1479 aa10.16□□□□□ -0.78
ABCB1-211ENST00000622132 PDCP20941 246 aa10.15□□□□□ -0.78
ABCB1-211ENST00000622132 CHRNDQ07001 517 aa10.15□□□□□ -0.78
ABCB1-211ENST00000622132 TBC1D9BQ66K14 1250 aa10.15□□□□□ -0.78
ABCB1-211ENST00000622132 MIGA1Q8NAN2 632 aa10.15□□□□□ -0.78
ABCB1-211ENST00000622132 LINC00116Q8NCU8 138 aa10.15□□□□□ -0.78
ABCB1-211ENST00000622132 GZF1Q9H116 711 aaPredicted RBP10.15□□□□□ -0.78
ABCB1-211ENST00000622132 KDM2BQ8NHM5 1336 aa10.15□□□□□ -0.78
ABCB1-211ENST00000622132 TRIM22Q8IYM9 498 aa10.15□□□□□ -0.78
ABCB1-211ENST00000622132 SYAP1Q96A49 352 aaPredicted RBP10.15□□□□□ -0.78
ABCB1-211ENST00000622132 K7ELQ4 463 aaPredicted RBP10.15□□□□□ -0.78
ABCB1-211ENST00000622132 SUPT20HQ8NEM7 779 aa10.15□□□□□ -0.78
ABCB1-211ENST00000622132 BRMS1Q9HCU9 246 aa10.15□□□□□ -0.78
ABCB1-211ENST00000622132 PDE8BO95263 885 aa10.15□□□□□ -0.79
ABCB1-211ENST00000622132 HMGB1P09429 215 aaKnown RBP10.15□□□□□ -0.79
ABCB1-211ENST00000622132 SYNE4Q8N205 404 aa10.15□□□□□ -0.79
ABCB1-211ENST00000622132 TTLL11Q8NHH1 800 aa10.15□□□□□ -0.79
ABCB1-211ENST00000622132 NDUFB9Q9Y6M9 179 aa10.15□□□□□ -0.79
ABCB1-211ENST00000622132 MAGEB6P1A0A0J9YX57 407 aa10.14□□□□□ -0.79
ABCB1-211ENST00000622132 HLA-DOAP06340 250 aa10.14□□□□□ -0.79
ABCB1-211ENST00000622132 ISCA1Q9BUE6 129 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms