RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 RIPOR2Q9Y4F9 1068 aa13.09□□□□□ -0.31
CPNE3-212ENST00000621783 PARP3Q9Y6F1 533 aa13.09□□□□□ -0.31
CPNE3-212ENST00000621783 TAF1P21675 1872 aa13.08□□□□□ -0.32
CPNE3-212ENST00000621783 C8orf34Q49A92 452 aa13.08□□□□□ -0.32
CPNE3-212ENST00000621783 METTL24Q5JXM2 366 aa13.08□□□□□ -0.32
CPNE3-212ENST00000621783 PI4K2BQ8TCG2 481 aa13.08□□□□□ -0.32
CPNE3-212ENST00000621783 PDGFDQ9GZP0 370 aaPredicted RBP13.08□□□□□ -0.32
CPNE3-212ENST00000621783 CCDC8Q9H0W5 538 aaPredicted RBP13.08□□□□□ -0.32
CPNE3-212ENST00000621783 TTC41PQ6P2S7 1318 aa13.08□□□□□ -0.32
CPNE3-212ENST00000621783 ANKRD18AQ8IVF6 992 aa13.07□□□□□ -0.32
CPNE3-212ENST00000621783 VGLL2Q8N8G2 317 aa13.07□□□□□ -0.32
CPNE3-212ENST00000621783 CELF1Q92879 486 aaKnown RBP13.07□□□□□ -0.32
CPNE3-212ENST00000621783 GPATCH3Q96I76 525 aa13.07□□□□□ -0.32
CPNE3-212ENST00000621783 MPHOSPH8Q99549 860 aa13.07□□□□□ -0.32
CPNE3-212ENST00000621783 CEP126Q9P2H0 1117 aa13.07□□□□□ -0.32
CPNE3-212ENST00000621783 DBNLQ9UJU6 430 aaKnown RBP13.07□□□□□ -0.32
CPNE3-212ENST00000621783 MROH5Q6ZUA9 1318 aa13.07□□□□□ -0.32
CPNE3-212ENST00000621783 A0A1B0GUL7 405 aa13.06□□□□□ -0.32
CPNE3-212ENST00000621783 CRY2Q49AN0 593 aa13.06□□□□□ -0.32
CPNE3-212ENST00000621783 DDX46Q7L014 1031 aaKnown RBP13.06□□□□□ -0.32
CPNE3-212ENST00000621783 RPGRQ92834 1020 aaKnown RBP13.06□□□□□ -0.32
CPNE3-212ENST00000621783 DBNDD2Q9BQY9 259 aa13.06□□□□□ -0.32
CPNE3-212ENST00000621783 ECHDC1Q9NTX5 307 aa13.06□□□□□ -0.32
CPNE3-212ENST00000621783 RNF216Q9NWF9 866 aaPredicted RBP13.06□□□□□ -0.32
CPNE3-212ENST00000621783 AKAP2Q9Y2D5 859 aa13.06□□□□□ -0.32
CPNE3-212ENST00000621783 LRRC37AA6NMS7 1700 aa13.05□□□□□ -0.32
CPNE3-212ENST00000621783 ATP2B3Q16720 1220 aa13.05□□□□□ -0.32
CPNE3-212ENST00000621783 SLC16A10Q8TF71 515 aa13.05□□□□□ -0.32
CPNE3-212ENST00000621783 BACH2Q9BYV9 841 aa13.05□□□□□ -0.32
CPNE3-212ENST00000621783 KLRG2A4D1S0 409 aaPredicted RBP13.04□□□□□ -0.32
CPNE3-212ENST00000621783 ERC2O15083 957 aa13.04□□□□□ -0.32
CPNE3-212ENST00000621783 GLRX3O76003 335 aaKnown RBP13.04□□□□□ -0.32
CPNE3-212ENST00000621783 PDE8BO95263 885 aa13.04□□□□□ -0.32
CPNE3-212ENST00000621783 SDSP20132 328 aa13.04□□□□□ -0.32
CPNE3-212ENST00000621783 CHRNDQ07001 517 aa13.04□□□□□ -0.32
CPNE3-212ENST00000621783 GRAPQ13588 217 aa13.04□□□□□ -0.32
CPNE3-212ENST00000621783 HELBQ8NG08 1087 aaPredicted RBP13.04□□□□□ -0.32
CPNE3-212ENST00000621783 GRAPLQ8TC17 118 aaPredicted RBP13.04□□□□□ -0.32
CPNE3-212ENST00000621783 NEUROD6Q96NK8 337 aa13.04□□□□□ -0.32
CPNE3-212ENST00000621783 BRIP1Q9BX63 1249 aa13.04□□□□□ -0.32
CPNE3-212ENST00000621783 TSHZ2Q9NRE2 1034 aa13.04□□□□□ -0.32
CPNE3-212ENST00000621783 BSDC1Q9NW68 430 aaPredicted RBP13.04□□□□□ -0.32
CPNE3-212ENST00000621783 C10orf71Q711Q0 1435 aa13.04□□□□□ -0.32
CPNE3-212ENST00000621783 ADORA1P30542 326 aa13.03□□□□□ -0.32
CPNE3-212ENST00000621783 TIMM10P62072 90 aa13.03□□□□□ -0.32
CPNE3-212ENST00000621783 RPS8P62241 208 aaKnown RBP13.03□□□□□ -0.32
CPNE3-212ENST00000621783 PUM3Q15397 648 aaKnown RBP13.03□□□□□ -0.32
CPNE3-212ENST00000621783 RBM17Q96I25 401 aaKnown RBP13.03□□□□□ -0.32
CPNE3-212ENST00000621783 AK9Q5TCS8 1911 aa13.03□□□□□ -0.32
CPNE3-212ENST00000621783 CDC45O75419 566 aa13.02□□□□□ -0.33
CPNE3-212ENST00000621783 TAF5LO75529 589 aa13.02□□□□□ -0.33
CPNE3-212ENST00000621783 FGFR2P21802 821 aa13.02□□□□□ -0.33
CPNE3-212ENST00000621783 HOXA10P31260 410 aaPredicted RBP13.02□□□□□ -0.33
CPNE3-212ENST00000621783 PDE6BP35913 854 aa13.02□□□□□ -0.33
CPNE3-212ENST00000621783 XAGE2Q96GT9 111 aa13.02□□□□□ -0.33
CPNE3-212ENST00000621783 MINPP1Q9UNW1 487 aa13.02□□□□□ -0.33
CPNE3-212ENST00000621783 DLEC1Q9Y238 1755 aa13.02□□□□□ -0.33
CPNE3-212ENST00000621783 TRIM6-TRIM34B2RNG4 842 aa13.01□□□□□ -0.33
CPNE3-212ENST00000621783 MAP4K4O95819 1239 aaPredicted RBP13.01□□□□□ -0.33
CPNE3-212ENST00000621783 SLC5A1P13866 664 aa13.01□□□□□ -0.33
CPNE3-212ENST00000621783 ATP5JP18859 108 aa13.01□□□□□ -0.33
CPNE3-212ENST00000621783 R3HDM1Q15032 1099 aaKnown RBP13.01□□□□□ -0.33
CPNE3-212ENST00000621783 LPIN2Q92539 896 aa13.01□□□□□ -0.33
CPNE3-212ENST00000621783 CRAMP1Q96RY5 1269 aa13.01□□□□□ -0.33
CPNE3-212ENST00000621783 CACNA1SQ13698 1873 aa13□□□□□ -0.33
CPNE3-212ENST00000621783 KIF13BQ9NQT8 1826 aa13□□□□□ -0.33
CPNE3-212ENST00000621783 LTBP1Q14766 1721 aa13□□□□□ -0.33
CPNE3-212ENST00000621783 SNAP23O00161 211 aa13□□□□□ -0.33
CPNE3-212ENST00000621783 ZBTB7AO95365 584 aa13□□□□□ -0.33
CPNE3-212ENST00000621783 SRGNP10124 158 aa13□□□□□ -0.33
CPNE3-212ENST00000621783 NPR1P16066 1061 aa13□□□□□ -0.33
CPNE3-212ENST00000621783 TBC1D9Q6ZT07 1266 aa13□□□□□ -0.33
CPNE3-212ENST00000621783 SLC51AQ86UW1 340 aa13□□□□□ -0.33
CPNE3-212ENST00000621783 CNTROBQ8N137 903 aa13□□□□□ -0.33
CPNE3-212ENST00000621783 RILPL2Q969X0 211 aa13□□□□□ -0.33
CPNE3-212ENST00000621783 BOLA2Q9H3K6 86 aa13□□□□□ -0.33
CPNE3-212ENST00000621783 IFIT1P09914 478 aaKnown RBP12.99□□□□□ -0.33
CPNE3-212ENST00000621783 TTC39AQ5SRH9 613 aa12.99□□□□□ -0.33
CPNE3-212ENST00000621783 GORABQ5T7V8 394 aa12.99□□□□□ -0.33
CPNE3-212ENST00000621783 ILDR2Q71H61 639 aa12.99□□□□□ -0.33
CPNE3-212ENST00000621783 C2CD5Q86YS7 1000 aa12.99□□□□□ -0.33
CPNE3-212ENST00000621783 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.99□□□□□ -0.33
CPNE3-212ENST00000621783 ANKRD2Q9GZV1 360 aa12.99□□□□□ -0.33
CPNE3-212ENST00000621783 MTFR1LQ9H019 292 aa12.99□□□□□ -0.33
CPNE3-212ENST00000621783 PPEF1O14829 653 aaPredicted RBP12.98□□□□□ -0.33
CPNE3-212ENST00000621783 UBE4AQ14139 1066 aa12.98□□□□□ -0.33
CPNE3-212ENST00000621783 CCDC158Q5M9N0 1113 aa12.98□□□□□ -0.33
CPNE3-212ENST00000621783 MASTLQ96GX5 879 aa12.98□□□□□ -0.33
CPNE3-212ENST00000621783 HAUS7Q99871 368 aa12.98□□□□□ -0.33
CPNE3-212ENST00000621783 KIAA1551Q9HCM1 1747 aa12.98□□□□□ -0.33
CPNE3-212ENST00000621783 PSDA5PKW4 1024 aaPredicted RBP12.97□□□□□ -0.33
CPNE3-212ENST00000621783 BBOX1O75936 387 aa12.97□□□□□ -0.33
CPNE3-212ENST00000621783 SEC24BO95487 1268 aa12.97□□□□□ -0.33
CPNE3-212ENST00000621783 PHKA1P46020 1223 aa12.97□□□□□ -0.33
CPNE3-212ENST00000621783 STYK1Q6J9G0 422 aa12.97□□□□□ -0.33
CPNE3-212ENST00000621783 TMC4Q7Z404 712 aa12.97□□□□□ -0.33
CPNE3-212ENST00000621783 EVI5LQ96CN4 794 aa12.97□□□□□ -0.33
CPNE3-212ENST00000621783 DNAJC2Q99543 621 aaKnown RBP12.97□□□□□ -0.33
CPNE3-212ENST00000621783 NDUFB9Q9Y6M9 179 aa12.97□□□□□ -0.33
CPNE3-212ENST00000621783 RFX7Q2KHR2 1363 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms