RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, human

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBFOX1-223	ENST00000620507	SLAIN2	Q9P270	581 aa		10.81	□□□□□ -0.68
RBFOX1-223	ENST00000620507	TPCN1	Q9ULQ1	816 aa		10.81	□□□□□ -0.68
RBFOX1-223	ENST00000620507	RBM10	P98175	930 aa	Known RBP	10.81	□□□□□ -0.68
RBFOX1-223	ENST00000620507	C8orf76	Q96K31	380 aa		10.81	□□□□□ -0.68
RBFOX1-223	ENST00000620507	NACAP1	Q9BZK3	213 aa		10.81	□□□□□ -0.68
RBFOX1-223	ENST00000620507	SALL3	Q9BXA9	1300 aa		10.8	□□□□□ -0.68
RBFOX1-223	ENST00000620507	EPHA10	Q5JZY3	1008 aa		10.8	□□□□□ -0.68
RBFOX1-223	ENST00000620507	CHST3	Q7LGC8	479 aa		10.8	□□□□□ -0.68
RBFOX1-223	ENST00000620507	SEC62	Q99442	399 aa	Known RBP	10.8	□□□□□ -0.68
RBFOX1-223	ENST00000620507	HELLS	Q9NRZ9	838 aa		10.8	□□□□□ -0.68
RBFOX1-223	ENST00000620507	ZKSCAN5	Q9Y2L8	839 aa		10.8	□□□□□ -0.68
RBFOX1-223	ENST00000620507	KNDC1	Q76NI1	1749 aa		10.8	□□□□□ -0.68
RBFOX1-223	ENST00000620507	ERBB4	Q15303	1308 aa		10.8	□□□□□ -0.68
RBFOX1-223	ENST00000620507	GOLGA8B	A8MQT2	603 aa		10.8	□□□□□ -0.68
RBFOX1-223	ENST00000620507	PTPN12	Q05209	780 aa	Known RBP	10.8	□□□□□ -0.68
RBFOX1-223	ENST00000620507	NECTIN1	Q15223	517 aa		10.8	□□□□□ -0.68
RBFOX1-223	ENST00000620507	STK11IP	Q8N1F8	1099 aa		10.8	□□□□□ -0.68
RBFOX1-223	ENST00000620507	PPP1R9B	Q96SB3	815 aa		10.8	□□□□□ -0.68
RBFOX1-223	ENST00000620507	APOBR	Q0VD83	1088 aa		10.8	□□□□□ -0.68
RBFOX1-223	ENST00000620507	KLHL34	Q8N239	644 aa		10.8	□□□□□ -0.68
RBFOX1-223	ENST00000620507	IL25	Q9H293	177 aa		10.8	□□□□□ -0.68
RBFOX1-223	ENST00000620507	MTMR6	Q9Y217	621 aa		10.8	□□□□□ -0.68
RBFOX1-223	ENST00000620507	VIRMA	Q69YN4	1812 aa	Known RBP	10.79	□□□□□ -0.68
RBFOX1-223	ENST00000620507	DLG5	Q8TDM6	1919 aa		10.79	□□□□□ -0.68
RBFOX1-223	ENST00000620507	TAF5L	O75529	589 aa		10.79	□□□□□ -0.68
RBFOX1-223	ENST00000620507	CDKL5	O76039	1030 aa		10.79	□□□□□ -0.68
RBFOX1-223	ENST00000620507	IGHMBP2	P38935	993 aa	Known RBP	10.79	□□□□□ -0.68
RBFOX1-223	ENST00000620507	TTF1	Q15361	905 aa	Predicted RBP	10.79	□□□□□ -0.68
RBFOX1-223	ENST00000620507	ZNF589	Q86UQ0	364 aa	Predicted RBP	10.79	□□□□□ -0.68
RBFOX1-223	ENST00000620507	NCOA7	Q8NI08	942 aa		10.79	□□□□□ -0.68
RBFOX1-223	ENST00000620507	HAUS7	Q99871	368 aa		10.79	□□□□□ -0.68
RBFOX1-223	ENST00000620507	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.79	□□□□□ -0.68
RBFOX1-223	ENST00000620507	NUTM2B	A6NNL0	878 aa	Predicted RBP	10.79	□□□□□ -0.68
RBFOX1-223	ENST00000620507	NUTM2E	B1AL46	878 aa	Predicted RBP	10.79	□□□□□ -0.68
RBFOX1-223	ENST00000620507	CDK11B	P21127	795 aa	Known RBP	10.79	□□□□□ -0.68
RBFOX1-223	ENST00000620507	TDO2	P48775	406 aa		10.79	□□□□□ -0.68
RBFOX1-223	ENST00000620507	CDC37L1	Q7L3B6	337 aa		10.79	□□□□□ -0.68
RBFOX1-223	ENST00000620507	NUTM2A	Q8IVF1	878 aa	Predicted RBP	10.79	□□□□□ -0.68
RBFOX1-223	ENST00000620507	ZNF592	Q92610	1267 aa		10.79	□□□□□ -0.68
RBFOX1-223	ENST00000620507	LRP2BP	Q9P2M1	347 aa		10.79	□□□□□ -0.68
RBFOX1-223	ENST00000620507	CCDC69	A6NI79	296 aa		10.78	□□□□□ -0.68
RBFOX1-223	ENST00000620507	LARGE1	O95461	756 aa		10.78	□□□□□ -0.68
RBFOX1-223	ENST00000620507	RAB11FIP4	Q86YS3	637 aa		10.78	□□□□□ -0.68
RBFOX1-223	ENST00000620507	DNAJC10	Q8IXB1	793 aa		10.78	□□□□□ -0.68
RBFOX1-223	ENST00000620507	JMY	Q8N9B5	988 aa		10.78	□□□□□ -0.68
RBFOX1-223	ENST00000620507	BTG4	Q9NY30	223 aa		10.78	□□□□□ -0.68
RBFOX1-223	ENST00000620507	ORC3	Q9UBD5	711 aa	Predicted RBP	10.78	□□□□□ -0.68
RBFOX1-223	ENST00000620507	AKAP12	Q02952	1782 aa		10.78	□□□□□ -0.68
RBFOX1-223	ENST00000620507	C1orf167	Q5SNV9	1468 aa		10.78	□□□□□ -0.68
RBFOX1-223	ENST00000620507	ADAMTS2	O95450	1211 aa		10.78	□□□□□ -0.68
RBFOX1-223	ENST00000620507	ZNF165	P49910	485 aa		10.78	□□□□□ -0.68
RBFOX1-223	ENST00000620507	MAP3K12	Q12852	859 aa		10.78	□□□□□ -0.68
RBFOX1-223	ENST00000620507	SLC9C2	Q5TAH2	1124 aa		10.78	□□□□□ -0.68
RBFOX1-223	ENST00000620507	NAPB	Q9H115	298 aa		10.78	□□□□□ -0.68
RBFOX1-223	ENST00000620507	KLF18	A0A0U1RQI7	1052 aa		10.78	□□□□□ -0.68
RBFOX1-223	ENST00000620507	ATP2B1	P20020	1258 aa		10.78	□□□□□ -0.68
RBFOX1-223	ENST00000620507	GNL3L	Q9NVN8	582 aa	Known RBP	10.78	□□□□□ -0.68
RBFOX1-223	ENST00000620507	HOOK1	Q9UJC3	728 aa	Known RBP	10.78	□□□□□ -0.68
RBFOX1-223	ENST00000620507	FER1L4	A9Z1Z3	1794 aa		10.77	□□□□□ -0.68
RBFOX1-223	ENST00000620507	PTPDC1	A2A3K4	754 aa		10.77	□□□□□ -0.68
RBFOX1-223	ENST00000620507	TCIRG1	Q13488	830 aa		10.77	□□□□□ -0.68
RBFOX1-223	ENST00000620507	TRIM22	Q8IYM9	498 aa		10.77	□□□□□ -0.68
RBFOX1-223	ENST00000620507	CEP57L1	Q8IYX8	460 aa		10.77	□□□□□ -0.68
RBFOX1-223	ENST00000620507	TTC14	Q96N46	770 aa		10.77	□□□□□ -0.68
RBFOX1-223	ENST00000620507	ZNF830	Q96NB3	372 aa	Predicted RBP	10.77	□□□□□ -0.68
RBFOX1-223	ENST00000620507	ABCF2	Q9UG63	623 aa		10.77	□□□□□ -0.68
RBFOX1-223	ENST00000620507	NOL7	Q9UMY1	257 aa	Known RBP	10.77	□□□□□ -0.68
RBFOX1-223	ENST00000620507	WDR17	Q8IZU2	1322 aa		10.77	□□□□□ -0.68
RBFOX1-223	ENST00000620507	UQCRHL	A0A096LP55	91 aa		10.77	□□□□□ -0.69
RBFOX1-223	ENST00000620507	JAK2	O60674	1132 aa		10.77	□□□□□ -0.69
RBFOX1-223	ENST00000620507	UQCRH	P07919	91 aa		10.77	□□□□□ -0.69
RBFOX1-223	ENST00000620507	SLC5A1	P13866	664 aa		10.77	□□□□□ -0.69
RBFOX1-223	ENST00000620507	LRRC24	Q50LG9	513 aa		10.77	□□□□□ -0.69
RBFOX1-223	ENST00000620507	FAM200A	Q8TCP9	573 aa		10.77	□□□□□ -0.69
RBFOX1-223	ENST00000620507	XAGE2	Q96GT9	111 aa		10.77	□□□□□ -0.69
RBFOX1-223	ENST00000620507	SPATA31A3	Q5VYP0	1347 aa		10.77	□□□□□ -0.69
RBFOX1-223	ENST00000620507	IRS4	O14654	1257 aa	Predicted RBP	10.77	□□□□□ -0.69
RBFOX1-223	ENST00000620507	CTAGE5	O15320	804 aa		10.77	□□□□□ -0.69
RBFOX1-223	ENST00000620507	POLR3D	P05423	398 aa	Predicted RBP	10.77	□□□□□ -0.69
RBFOX1-223	ENST00000620507	CCAR1	Q8IX12	1150 aa	Known RBP	10.77	□□□□□ -0.69
RBFOX1-223	ENST00000620507	FSIP1	Q8NA03	581 aa		10.77	□□□□□ -0.69
RBFOX1-223	ENST00000620507	USP42	Q9H9J4	1324 aa	Known RBP	10.77	□□□□□ -0.69
RBFOX1-223	ENST00000620507	HEG1	Q9ULI3	1381 aa		10.76	□□□□□ -0.69
RBFOX1-223	ENST00000620507	TULP1	O00294	542 aa	Predicted RBP	10.76	□□□□□ -0.69
RBFOX1-223	ENST00000620507	PRC1	O43663	620 aa		10.76	□□□□□ -0.69
RBFOX1-223	ENST00000620507	TYRO3	Q06418	890 aa		10.76	□□□□□ -0.69
RBFOX1-223	ENST00000620507	DZIP3	Q86Y13	1208 aa	Known RBP	10.76	□□□□□ -0.69
RBFOX1-223	ENST00000620507	NUP133	Q8WUM0	1156 aa		10.76	□□□□□ -0.69
RBFOX1-223	ENST00000620507	UQCRFS1P1	P0C7P4	283 aa		10.75	□□□□□ -0.69
RBFOX1-223	ENST00000620507	XBP1	P17861	261 aa		10.75	□□□□□ -0.69
RBFOX1-223	ENST00000620507	PDIA6	Q15084	440 aa		10.75	□□□□□ -0.69
RBFOX1-223	ENST00000620507	ANO6	Q4KMQ2	910 aa		10.75	□□□□□ -0.69
RBFOX1-223	ENST00000620507	AEBP2	Q6ZN18	517 aa	Predicted RBP	10.75	□□□□□ -0.69
RBFOX1-223	ENST00000620507	GTF3C6	Q969F1	213 aa		10.75	□□□□□ -0.69
RBFOX1-223	ENST00000620507	TTC12	Q9H892	705 aa	Predicted RBP	10.75	□□□□□ -0.69
RBFOX1-223	ENST00000620507	RAI14	Q9P0K7	980 aa		10.75	□□□□□ -0.69
RBFOX1-223	ENST00000620507	CYP21A2	P08686	494 aa		10.75	□□□□□ -0.69
RBFOX1-223	ENST00000620507	ITGA6	P23229	1130 aa		10.75	□□□□□ -0.69
RBFOX1-223	ENST00000620507	HELB	Q8NG08	1087 aa	Predicted RBP	10.75	□□□□□ -0.69
RBFOX1-223	ENST00000620507	RASSF8	Q8NHQ8	419 aa		10.75	□□□□□ -0.69

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