RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 PAG1Q9NWQ8 432 aa23.1■■□□□ 1.29
LAPTM4B-204ENST00000619747 NUP188Q5SRE5 1749 aa23.09■■□□□ 1.29
LAPTM4B-204ENST00000619747 PCCAP05165 728 aaPredicted RBP23.09■■□□□ 1.29
LAPTM4B-204ENST00000619747 IFIT1P09914 478 aaKnown RBP23.09■■□□□ 1.29
LAPTM4B-204ENST00000619747 NASPP49321 788 aaPredicted RBP23.09■■□□□ 1.29
LAPTM4B-204ENST00000619747 GREM2Q9H772 168 aa23.09■■□□□ 1.29
LAPTM4B-204ENST00000619747 MARCH10Q8NA82 808 aaPredicted RBP23.08■■□□□ 1.29
LAPTM4B-204ENST00000619747 RBM27Q9P2N5 1060 aaKnown RBP23.08■■□□□ 1.29
LAPTM4B-204ENST00000619747 ZNF609O15014 1411 aa23.08■■□□□ 1.29
LAPTM4B-204ENST00000619747 MED23Q9ULK4 1368 aa23.08■■□□□ 1.29
LAPTM4B-204ENST00000619747 KBTBD3Q8NAB2 608 aa23.08■■□□□ 1.29
LAPTM4B-204ENST00000619747 NSFL1CQ9UNZ2 370 aaKnown RBP23.08■■□□□ 1.29
LAPTM4B-204ENST00000619747 SPATA31A1Q5TZJ5 1347 aa23.07■■□□□ 1.28
LAPTM4B-204ENST00000619747 ATP6V1AP38606 617 aa23.07■■□□□ 1.28
LAPTM4B-204ENST00000619747 KCNQ4P56696 695 aa23.07■■□□□ 1.28
LAPTM4B-204ENST00000619747 ME3Q16798 604 aa23.07■■□□□ 1.28
LAPTM4B-204ENST00000619747 KLHL40Q2TBA0 621 aa23.07■■□□□ 1.28
LAPTM4B-204ENST00000619747 PPP4R3BQ5MIZ7 849 aa23.07■■□□□ 1.28
LAPTM4B-204ENST00000619747 VPS53Q5VIR6 699 aa23.07■■□□□ 1.28
LAPTM4B-204ENST00000619747 TRIM28Q13263 835 aaKnown RBP23.07■■□□□ 1.28
LAPTM4B-204ENST00000619747 PI16Q6UXB8 463 aa23.07■■□□□ 1.28
LAPTM4B-204ENST00000619747 TPCN1Q9ULQ1 816 aa23.07■■□□□ 1.28
LAPTM4B-204ENST00000619747 SMC3Q9UQE7 1217 aa23.07■■□□□ 1.28
LAPTM4B-204ENST00000619747 TJP1Q07157 1748 aa23.07■■□□□ 1.28
LAPTM4B-204ENST00000619747 KCNQ2O43526 872 aa23.06■■□□□ 1.28
LAPTM4B-204ENST00000619747 ITGA6P23229 1130 aa23.06■■□□□ 1.28
LAPTM4B-204ENST00000619747 RNF20Q5VTR2 975 aa23.06■■□□□ 1.28
LAPTM4B-204ENST00000619747 LDHAL6AQ6ZMR3 332 aa23.06■■□□□ 1.28
LAPTM4B-204ENST00000619747 AEBP2Q6ZN18 517 aaPredicted RBP23.06■■□□□ 1.28
LAPTM4B-204ENST00000619747 MTERF4Q7Z6M4 381 aaKnown RBP23.06■■□□□ 1.28
LAPTM4B-204ENST00000619747 IRS4O14654 1257 aaPredicted RBP23.06■■□□□ 1.28
LAPTM4B-204ENST00000619747 STK3Q13188 491 aa23.06■■□□□ 1.28
LAPTM4B-204ENST00000619747 MCMDC2Q4G0Z9 681 aa23.06■■□□□ 1.28
LAPTM4B-204ENST00000619747 BLOC1S2Q6QNY1 142 aa23.06■■□□□ 1.28
LAPTM4B-204ENST00000619747 COL14A1Q05707 1796 aaKnown RBP23.06■■□□□ 1.28
LAPTM4B-204ENST00000619747 TTLL11Q8NHH1 800 aa23.06■■□□□ 1.28
LAPTM4B-204ENST00000619747 GPT2Q8TD30 523 aa23.06■■□□□ 1.28
LAPTM4B-204ENST00000619747 XAGE2Q96GT9 111 aa23.06■■□□□ 1.28
LAPTM4B-204ENST00000619747 COL16A1Q07092 1604 aaPredicted RBP23.05■■□□□ 1.28
LAPTM4B-204ENST00000619747 PTMSP20962 102 aa23.05■■□□□ 1.28
LAPTM4B-204ENST00000619747 SCARF1Q14162 830 aa23.05■■□□□ 1.28
LAPTM4B-204ENST00000619747 HSP90AB3PQ58FF7 597 aa23.05■■□□□ 1.28
LAPTM4B-204ENST00000619747 ANP32BQ92688 251 aaKnown RBP23.05■■□□□ 1.28
LAPTM4B-204ENST00000619747 KCNB2Q92953 911 aa23.05■■□□□ 1.28
LAPTM4B-204ENST00000619747 LRRC2Q9BYS8 371 aa23.05■■□□□ 1.28
LAPTM4B-204ENST00000619747 TM6SF1Q9BZW5 370 aa23.05■■□□□ 1.28
LAPTM4B-204ENST00000619747 A0A0G2JLW4 131 aa23.04■■□□□ 1.28
LAPTM4B-204ENST00000619747 SYT1P21579 422 aa23.04■■□□□ 1.28
LAPTM4B-204ENST00000619747 METTL24Q5JXM2 366 aa23.04■■□□□ 1.28
LAPTM4B-204ENST00000619747 HELBQ8NG08 1087 aaPredicted RBP23.04■■□□□ 1.28
LAPTM4B-204ENST00000619747 CNNM1Q9NRU3 951 aa23.04■■□□□ 1.28
LAPTM4B-204ENST00000619747 HCLS1P14317 486 aaPredicted RBP23.03■■□□□ 1.28
LAPTM4B-204ENST00000619747 GJB2P29033 226 aa23.03■■□□□ 1.28
LAPTM4B-204ENST00000619747 UBN2Q6ZU65 1347 aa23.03■■□□□ 1.28
LAPTM4B-204ENST00000619747 DYNC1I1O14576 645 aa23.03■■□□□ 1.28
LAPTM4B-204ENST00000619747 CIAO1O76071 339 aa23.03■■□□□ 1.28
LAPTM4B-204ENST00000619747 CSF1RP07333 972 aa23.03■■□□□ 1.28
LAPTM4B-204ENST00000619747 ST3GAL1Q11201 340 aa23.03■■□□□ 1.28
LAPTM4B-204ENST00000619747 TTC39AQ5SRH9 613 aa23.03■■□□□ 1.28
LAPTM4B-204ENST00000619747 CCDC94Q9BW85 323 aaPredicted RBP23.03■■□□□ 1.28
LAPTM4B-204ENST00000619747 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.03■■□□□ 1.28
LAPTM4B-204ENST00000619747 CYP21A2P08686 494 aa23.02■■□□□ 1.28
LAPTM4B-204ENST00000619747 PSMA5P28066 241 aa23.02■■□□□ 1.28
LAPTM4B-204ENST00000619747 FAM98CQ17RN3 349 aaKnown RBP23.02■■□□□ 1.28
LAPTM4B-204ENST00000619747 CCDC158Q5M9N0 1113 aa23.02■■□□□ 1.28
LAPTM4B-204ENST00000619747 GPR108Q9NPR9 543 aa23.02■■□□□ 1.28
LAPTM4B-204ENST00000619747 CRKLP46109 303 aaKnown RBP23.01■■□□□ 1.27
LAPTM4B-204ENST00000619747 SMIM5Q71RC9 77 aa23.01■■□□□ 1.27
LAPTM4B-204ENST00000619747 RPAP1Q9BWH6 1393 aaPredicted RBP23.01■■□□□ 1.27
LAPTM4B-204ENST00000619747 LOC102724428A0A0B4J2F2 783 aa23.01■■□□□ 1.27
LAPTM4B-204ENST00000619747 SNAP23O00161 211 aa23.01■■□□□ 1.27
LAPTM4B-204ENST00000619747 CTSWP56202 376 aa23.01■■□□□ 1.27
LAPTM4B-204ENST00000619747 SIK1P57059 783 aa23.01■■□□□ 1.27
LAPTM4B-204ENST00000619747 IL6STP40189 918 aaPredicted RBP23.01■■□□□ 1.27
LAPTM4B-204ENST00000619747 ITPK1Q13572 414 aa23.01■■□□□ 1.27
LAPTM4B-204ENST00000619747 WDR33Q9C0J8 1336 aaKnown RBP23■■□□□ 1.27
LAPTM4B-204ENST00000619747 STX6O43752 255 aa23■■□□□ 1.27
LAPTM4B-204ENST00000619747 RPS6KB1P23443 525 aa23■■□□□ 1.27
LAPTM4B-204ENST00000619747 C8orf37Q96NL8 207 aa23■■□□□ 1.27
LAPTM4B-204ENST00000619747 INTS5Q6P9B9 1019 aaKnown RBP23■■□□□ 1.27
LAPTM4B-204ENST00000619747 VPS37CA5D8V6 355 aaPredicted RBP22.99■■□□□ 1.27
LAPTM4B-204ENST00000619747 ZAP70P43403 619 aa22.99■■□□□ 1.27
LAPTM4B-204ENST00000619747 WASHC4Q2M389 1173 aa22.99■■□□□ 1.27
LAPTM4B-204ENST00000619747 ANKRD18BA2A2Z9 1011 aa22.99■■□□□ 1.27
LAPTM4B-204ENST00000619747 VGLL3A8MV65 326 aa22.99■■□□□ 1.27
LAPTM4B-204ENST00000619747 GADD45BO75293 160 aaPredicted RBP22.99■■□□□ 1.27
LAPTM4B-204ENST00000619747 TMEM51Q9NW97 253 aa22.99■■□□□ 1.27
LAPTM4B-204ENST00000619747 TOB2Q14106 344 aaPredicted RBP22.98■■□□□ 1.27
LAPTM4B-204ENST00000619747 ATP2B3Q16720 1220 aa22.98■■□□□ 1.27
LAPTM4B-204ENST00000619747 ZSCAN23Q3MJ62 389 aa22.98■■□□□ 1.27
LAPTM4B-204ENST00000619747 NEK1Q96PY6 1258 aa22.98■■□□□ 1.27
LAPTM4B-204ENST00000619747 PLA2G12BQ9BX93 195 aa22.98■■□□□ 1.27
LAPTM4B-204ENST00000619747 AKAP2Q9Y2D5 859 aa22.98■■□□□ 1.27
LAPTM4B-204ENST00000619747 RIPOR2Q9Y4F9 1068 aa22.98■■□□□ 1.27
LAPTM4B-204ENST00000619747 TCHHQ07283 1943 aa22.98■■□□□ 1.27
LAPTM4B-204ENST00000619747 SUSD4Q5VX71 490 aa22.98■■□□□ 1.27
LAPTM4B-204ENST00000619747 CCDC87Q9NVE4 849 aa22.98■■□□□ 1.27
LAPTM4B-204ENST00000619747 FAM182BQ5T319 152 aa22.97■■□□□ 1.27
LAPTM4B-204ENST00000619747 USPL1Q5W0Q7 1092 aa22.97■■□□□ 1.27
LAPTM4B-204ENST00000619747 TTLL5Q6EMB2 1281 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms