RNA–Protein interactions for RNA: ENST00000618449.4

CPEB1-216, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,459 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-216ENST00000618449 DNAJC2Q99543 621 aaKnown RBP13.61□□□□□ -0.23
CPEB1-216ENST00000618449 LAMB2P55268 1798 aa13.6□□□□□ -0.23
CPEB1-216ENST00000618449 ADORA1P30542 326 aa13.59□□□□□ -0.23
CPEB1-216ENST00000618449 RFC4P35249 363 aa13.59□□□□□ -0.23
CPEB1-216ENST00000618449 SLC27A3Q5K4L6 730 aa13.59□□□□□ -0.23
CPEB1-216ENST00000618449 VGLL2Q8N8G2 317 aa13.59□□□□□ -0.23
CPEB1-216ENST00000618449 RUFY2Q8WXA3 655 aa13.59□□□□□ -0.23
CPEB1-216ENST00000618449 TNPO1Q92973 898 aaKnown RBP13.59□□□□□ -0.23
CPEB1-216ENST00000618449 XAGE2Q96GT9 111 aa13.59□□□□□ -0.23
CPEB1-216ENST00000618449 SETDB2Q96T68 719 aa13.59□□□□□ -0.23
CPEB1-216ENST00000618449 HIP1O00291 1037 aa13.59□□□□□ -0.23
CPEB1-216ENST00000618449 FAM227BQ96M60 508 aa13.59□□□□□ -0.23
CPEB1-216ENST00000618449 LSG1Q9H089 658 aaKnown RBP13.59□□□□□ -0.23
CPEB1-216ENST00000618449 LRP5O75197 1615 aa13.59□□□□□ -0.23
CPEB1-216ENST00000618449 C4AP0C0L4 1744 aa13.59□□□□□ -0.23
CPEB1-216ENST00000618449 RTL9Q8NET4 1388 aa13.59□□□□□ -0.23
CPEB1-216ENST00000618449 EPB41L2O43491 1005 aaKnown RBP13.58□□□□□ -0.23
CPEB1-216ENST00000618449 ST18O60284 1047 aa13.58□□□□□ -0.23
CPEB1-216ENST00000618449 PDE8BO95263 885 aa13.58□□□□□ -0.23
CPEB1-216ENST00000618449 GTF2E1P29083 439 aaPredicted RBP13.58□□□□□ -0.23
CPEB1-216ENST00000618449 NMIQ13287 307 aaPredicted RBP13.58□□□□□ -0.23
CPEB1-216ENST00000618449 ATP2B3Q16720 1220 aa13.58□□□□□ -0.23
CPEB1-216ENST00000618449 C3orf67Q6ZVT6 689 aa13.58□□□□□ -0.23
CPEB1-216ENST00000618449 DDX46Q7L014 1031 aaKnown RBP13.58□□□□□ -0.23
CPEB1-216ENST00000618449 PALD1Q9ULE6 856 aa13.58□□□□□ -0.23
CPEB1-216ENST00000618449 MCCP23508 829 aa13.58□□□□□ -0.24
CPEB1-216ENST00000618449 RXRBP28702 533 aa13.58□□□□□ -0.24
CPEB1-216ENST00000618449 GBP4Q96PP9 640 aa13.58□□□□□ -0.24
CPEB1-216ENST00000618449 RAD50Q92878 1312 aa13.58□□□□□ -0.24
CPEB1-216ENST00000618449 ABCC12Q96J65 1359 aa13.58□□□□□ -0.24
CPEB1-216ENST00000618449 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.57□□□□□ -0.24
CPEB1-216ENST00000618449 IFIT1P09914 478 aaKnown RBP13.57□□□□□ -0.24
CPEB1-216ENST00000618449 CCDC158Q5M9N0 1113 aa13.57□□□□□ -0.24
CPEB1-216ENST00000618449 GORABQ5T7V8 394 aa13.57□□□□□ -0.24
CPEB1-216ENST00000618449 KIAA1211Q6ZU35 1233 aa13.57□□□□□ -0.24
CPEB1-216ENST00000618449 NBPF5PQ86XG9 351 aaPredicted RBP13.57□□□□□ -0.24
CPEB1-216ENST00000618449 PROM2Q8N271 834 aa13.57□□□□□ -0.24
CPEB1-216ENST00000618449 MPHOSPH8Q99549 860 aa13.57□□□□□ -0.24
CPEB1-216ENST00000618449 A0A0D9SFI3 127 aa13.57□□□□□ -0.24
CPEB1-216ENST00000618449 GOLIM4O00461 696 aa13.57□□□□□ -0.24
CPEB1-216ENST00000618449 ADRA2BP18089 450 aa13.57□□□□□ -0.24
CPEB1-216ENST00000618449 SLC10A5Q5PT55 438 aa13.57□□□□□ -0.24
CPEB1-216ENST00000618449 HELBQ8NG08 1087 aaPredicted RBP13.57□□□□□ -0.24
CPEB1-216ENST00000618449 NYXQ9GZU5 481 aa13.57□□□□□ -0.24
CPEB1-216ENST00000618449 PAG1Q9NWQ8 432 aa13.57□□□□□ -0.24
CPEB1-216ENST00000618449 MROH5Q6ZUA9 1318 aa13.57□□□□□ -0.24
CPEB1-216ENST00000618449 COL24A1Q17RW2 1714 aa13.57□□□□□ -0.24
CPEB1-216ENST00000618449 TRAK2O60296 914 aa13.56□□□□□ -0.24
CPEB1-216ENST00000618449 HSPA4P34932 840 aa13.56□□□□□ -0.24
CPEB1-216ENST00000618449 SF3B3Q15393 1217 aaKnown RBP13.56□□□□□ -0.24
CPEB1-216ENST00000618449 TXNRD1Q16881 649 aa13.56□□□□□ -0.24
CPEB1-216ENST00000618449 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.56□□□□□ -0.24
CPEB1-216ENST00000618449 CHGBP05060 677 aa13.56□□□□□ -0.24
CPEB1-216ENST00000618449 IGHMBP2P38935 993 aaKnown RBP13.56□□□□□ -0.24
CPEB1-216ENST00000618449 TTC39AQ5SRH9 613 aa13.56□□□□□ -0.24
CPEB1-216ENST00000618449 TPTE2Q6XPS3 522 aa13.56□□□□□ -0.24
CPEB1-216ENST00000618449 KBTBD3Q8NAB2 608 aa13.56□□□□□ -0.24
CPEB1-216ENST00000618449 UBR3Q6ZT12 1888 aa13.56□□□□□ -0.24
CPEB1-216ENST00000618449 COL4A1P02462 1669 aa13.56□□□□□ -0.24
CPEB1-216ENST00000618449 ANAPC15P60006 121 aa13.55□□□□□ -0.24
CPEB1-216ENST00000618449 PTH1RQ03431 593 aa13.55□□□□□ -0.24
CPEB1-216ENST00000618449 SNRKQ9NRH2 765 aa13.55□□□□□ -0.24
CPEB1-216ENST00000618449 RGS17Q9UGC6 210 aaPredicted RBP13.55□□□□□ -0.24
CPEB1-216ENST00000618449 RFX7Q2KHR2 1363 aa13.55□□□□□ -0.24
CPEB1-216ENST00000618449 TAF5LO75529 589 aa13.55□□□□□ -0.24
CPEB1-216ENST00000618449 SSFA2P28290 1259 aa13.55□□□□□ -0.24
CPEB1-216ENST00000618449 CCDC24Q8N4L8 307 aa13.55□□□□□ -0.24
CPEB1-216ENST00000618449 FGFR2P21802 821 aa13.54□□□□□ -0.24
CPEB1-216ENST00000618449 FKBP4Q02790 459 aaKnown RBP eCLIP13.54□□□□□ -0.24
CPEB1-216ENST00000618449 SCARF1Q14162 830 aa13.54□□□□□ -0.24
CPEB1-216ENST00000618449 NFIXQ14938 502 aa13.54□□□□□ -0.24
CPEB1-216ENST00000618449 PUM3Q15397 648 aaKnown RBP13.54□□□□□ -0.24
CPEB1-216ENST00000618449 CDC5LQ99459 802 aaKnown RBP13.54□□□□□ -0.24
CPEB1-216ENST00000618449 LPIN2Q92539 896 aa13.54□□□□□ -0.24
CPEB1-216ENST00000618449 IL17RAQ96F46 866 aa13.54□□□□□ -0.24
CPEB1-216ENST00000618449 BRPF3Q9ULD4 1205 aa13.54□□□□□ -0.24
CPEB1-216ENST00000618449 CCDC171Q6TFL3 1326 aa13.54□□□□□ -0.24
CPEB1-216ENST00000618449 MED23Q9ULK4 1368 aa13.54□□□□□ -0.24
CPEB1-216ENST00000618449 SPEF2Q9C093 1822 aa13.54□□□□□ -0.24
CPEB1-216ENST00000618449 SNAP23O00161 211 aa13.53□□□□□ -0.24
CPEB1-216ENST00000618449 APBA3O96018 575 aa13.53□□□□□ -0.24
CPEB1-216ENST00000618449 PTMSP20962 102 aa13.53□□□□□ -0.24
CPEB1-216ENST00000618449 ZNF589Q86UQ0 364 aaPredicted RBP13.53□□□□□ -0.24
CPEB1-216ENST00000618449 NLRP3Q96P20 1036 aa13.53□□□□□ -0.24
CPEB1-216ENST00000618449 CASZ1Q86V15 1759 aa13.53□□□□□ -0.24
CPEB1-216ENST00000618449 CARMIL3Q8ND23 1372 aa13.53□□□□□ -0.24
CPEB1-216ENST00000618449 PLSCR1O15162 318 aa13.53□□□□□ -0.24
CPEB1-216ENST00000618449 GZF1Q9H116 711 aaPredicted RBP13.53□□□□□ -0.24
CPEB1-216ENST00000618449 GYS1P13807 737 aa13.52□□□□□ -0.24
CPEB1-216ENST00000618449 NEK4P51957 841 aa13.52□□□□□ -0.24
CPEB1-216ENST00000618449 CHRNDQ07001 517 aa13.52□□□□□ -0.24
CPEB1-216ENST00000618449 L1TD1Q5T7N2 865 aaKnown RBP13.52□□□□□ -0.24
CPEB1-216ENST00000618449 POTEAQ6S8J7 498 aa13.52□□□□□ -0.24
CPEB1-216ENST00000618449 PI16Q6UXB8 463 aa13.52□□□□□ -0.24
CPEB1-216ENST00000618449 ANKRD18AQ8IVF6 992 aa13.52□□□□□ -0.24
CPEB1-216ENST00000618449 RASEFQ8IZ41 740 aa13.52□□□□□ -0.24
CPEB1-216ENST00000618449 PKNOX2Q96KN3 472 aa13.52□□□□□ -0.24
CPEB1-216ENST00000618449 SEC62Q99442 399 aaKnown RBP13.52□□□□□ -0.24
CPEB1-216ENST00000618449 TAF1P21675 1872 aa13.52□□□□□ -0.25
CPEB1-216ENST00000618449 MCAMP43121 646 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms