RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 OLFM4Q6UX06 510 aa12.74□□□□□ -0.37
POLR2A-209ENST00000617998 ASAP1Q9ULH1 1129 aa12.74□□□□□ -0.37
POLR2A-209ENST00000617998 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.74□□□□□ -0.37
POLR2A-209ENST00000617998 ZCCHC11Q5TAX3 1644 aaKnown RBP12.74□□□□□ -0.37
POLR2A-209ENST00000617998 PHKG2P15735 406 aa12.74□□□□□ -0.37
POLR2A-209ENST00000617998 PNMA3Q9UL41 463 aa12.74□□□□□ -0.37
POLR2A-209ENST00000617998 CERS3Q8IU89 383 aa12.74□□□□□ -0.37
POLR2A-209ENST00000617998 PTPRCP08575 1304 aa12.74□□□□□ -0.37
POLR2A-209ENST00000617998 CLRN2A0PK11 232 aa12.74□□□□□ -0.37
POLR2A-209ENST00000617998 BLOC1S2Q6QNY1 142 aa12.74□□□□□ -0.37
POLR2A-209ENST00000617998 MTIF3Q9H2K0 278 aaKnown RBP12.74□□□□□ -0.37
POLR2A-209ENST00000617998 DPF3Q92784 378 aa12.73□□□□□ -0.37
POLR2A-209ENST00000617998 TCHPQ9BT92 498 aa12.73□□□□□ -0.37
POLR2A-209ENST00000617998 ALDH1L1O75891 902 aa12.73□□□□□ -0.37
POLR2A-209ENST00000617998 HECW2Q9P2P5 1572 aa12.73□□□□□ -0.37
POLR2A-209ENST00000617998 KCNH4Q9UQ05 1017 aa12.73□□□□□ -0.37
POLR2A-209ENST00000617998 SCNN1DP51172 638 aa12.73□□□□□ -0.37
POLR2A-209ENST00000617998 CCDC191Q8NCU4 936 aa12.73□□□□□ -0.37
POLR2A-209ENST00000617998 MLH3Q9UHC1 1453 aa12.73□□□□□ -0.37
POLR2A-209ENST00000617998 A0A0G2JLW4 131 aa12.73□□□□□ -0.37
POLR2A-209ENST00000617998 RRP1P56182 461 aaKnown RBP12.73□□□□□ -0.37
POLR2A-209ENST00000617998 STK38Q15208 465 aa12.73□□□□□ -0.37
POLR2A-209ENST00000617998 CHST3Q7LGC8 479 aa12.73□□□□□ -0.37
POLR2A-209ENST00000617998 CHMP5Q9NZZ3 219 aa12.73□□□□□ -0.37
POLR2A-209ENST00000617998 RAD50Q92878 1312 aa12.73□□□□□ -0.37
POLR2A-209ENST00000617998 ARAP3Q8WWN8 1544 aa12.72□□□□□ -0.37
POLR2A-209ENST00000617998 KIF4AO95239 1232 aa12.72□□□□□ -0.37
POLR2A-209ENST00000617998 PNMA8AQ86V59 439 aaPredicted RBP12.72□□□□□ -0.37
POLR2A-209ENST00000617998 ADRA2BP18089 450 aa12.72□□□□□ -0.37
POLR2A-209ENST00000617998 TBC1D10BQ4KMP7 808 aaPredicted RBP12.72□□□□□ -0.37
POLR2A-209ENST00000617998 NSMFQ6X4W1 530 aa12.72□□□□□ -0.37
POLR2A-209ENST00000617998 CNPY2Q9Y2B0 182 aa12.72□□□□□ -0.37
POLR2A-209ENST00000617998 KCTD2Q14681 263 aa12.72□□□□□ -0.37
POLR2A-209ENST00000617998 SLC15A2Q16348 729 aa12.72□□□□□ -0.37
POLR2A-209ENST00000617998 MIGA1Q8NAN2 632 aa12.72□□□□□ -0.37
POLR2A-209ENST00000617998 DDX21Q9NR30 783 aaKnown RBP eCLIP12.72□□□□□ -0.37
POLR2A-209ENST00000617998 TARBP1Q13395 1621 aaKnown RBP12.72□□□□□ -0.37
POLR2A-209ENST00000617998 BCAMP50895 628 aa12.72□□□□□ -0.37
POLR2A-209ENST00000617998 BIRC2Q13490 618 aa12.72□□□□□ -0.37
POLR2A-209ENST00000617998 SHANK2Q9UPX8 1470 aa12.72□□□□□ -0.37
POLR2A-209ENST00000617998 NR1I2O75469 434 aa12.72□□□□□ -0.37
POLR2A-209ENST00000617998 MYO5CQ9NQX4 1742 aa12.72□□□□□ -0.37
POLR2A-209ENST00000617998 OVOS2A0A0G2JMS6 1433 aa12.71□□□□□ -0.37
POLR2A-209ENST00000617998 OVOS2A0A0J9YW53 1432 aa12.71□□□□□ -0.37
POLR2A-209ENST00000617998 OVOS2Q6IE36 1432 aa12.71□□□□□ -0.37
POLR2A-209ENST00000617998 SRP68Q9UHB9 627 aaKnown RBP12.71□□□□□ -0.37
POLR2A-209ENST00000617998 SLC9C2Q5TAH2 1124 aa12.71□□□□□ -0.37
POLR2A-209ENST00000617998 LINS1Q8NG48 757 aa12.71□□□□□ -0.37
POLR2A-209ENST00000617998 ZNF396Q96N95 335 aaPredicted RBP12.71□□□□□ -0.37
POLR2A-209ENST00000617998 PRDM5Q9NQX1 630 aaPredicted RBP12.71□□□□□ -0.37
POLR2A-209ENST00000617998 RPS6KA4O75676 772 aa12.71□□□□□ -0.38
POLR2A-209ENST00000617998 ELMSAN1Q6PJG2 1045 aa12.71□□□□□ -0.38
POLR2A-209ENST00000617998 SYNE4Q8N205 404 aa12.71□□□□□ -0.38
POLR2A-209ENST00000617998 ESR2Q92731 530 aa12.71□□□□□ -0.38
POLR2A-209ENST00000617998 HOMER2Q9NSB8 354 aa12.71□□□□□ -0.38
POLR2A-209ENST00000617998 MAGEB6Q8N7X4 407 aa12.71□□□□□ -0.38
POLR2A-209ENST00000617998 C6orf50Q9HD87 102 aa12.71□□□□□ -0.38
POLR2A-209ENST00000617998 EDC4Q6P2E9 1401 aaKnown RBP12.71□□□□□ -0.38
POLR2A-209ENST00000617998 ZBBXA8MT70 800 aa12.7□□□□□ -0.38
POLR2A-209ENST00000617998 DHX8Q14562 1220 aaKnown RBP12.7□□□□□ -0.38
POLR2A-209ENST00000617998 CSPG5O95196 566 aa12.7□□□□□ -0.38
POLR2A-209ENST00000617998 PUM3Q15397 648 aaKnown RBP12.7□□□□□ -0.38
POLR2A-209ENST00000617998 SDF4Q9BRK5 362 aa12.7□□□□□ -0.38
POLR2A-209ENST00000617998 AZI2Q9H6S1 392 aa12.7□□□□□ -0.38
POLR2A-209ENST00000617998 SSFA2P28290 1259 aa12.7□□□□□ -0.38
POLR2A-209ENST00000617998 PUS7Q96PZ0 661 aaKnown RBP12.7□□□□□ -0.38
POLR2A-209ENST00000617998 MBIPQ9NS73 344 aa12.7□□□□□ -0.38
POLR2A-209ENST00000617998 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.7□□□□□ -0.384e-6■□□□□ 9
POLR2A-209ENST00000617998 TMEM67Q5HYA8 995 aa12.7□□□□□ -0.38
POLR2A-209ENST00000617998 TRIM6Q9C030 488 aaPredicted RBP12.7□□□□□ -0.38
POLR2A-209ENST00000617998 GNAQP50148 359 aa12.7□□□□□ -0.38
POLR2A-209ENST00000617998 METP08581 1390 aa12.7□□□□□ -0.38
POLR2A-209ENST00000617998 TAF5LO75529 589 aa12.69□□□□□ -0.38
POLR2A-209ENST00000617998 IFIT1BQ5T764 474 aaKnown RBP12.69□□□□□ -0.38
POLR2A-209ENST00000617998 HACE1Q8IYU2 909 aa12.69□□□□□ -0.38
POLR2A-209ENST00000617998 SEPT11Q9NVA2 429 aaKnown RBP12.69□□□□□ -0.38
POLR2A-209ENST00000617998 GOLGA8AA7E2F4 631 aa12.69□□□□□ -0.38
POLR2A-209ENST00000617998 GOLGA8BA8MQT2 603 aa12.69□□□□□ -0.38
POLR2A-209ENST00000617998 RETREG2Q8NC44 543 aa12.69□□□□□ -0.38
POLR2A-209ENST00000617998 ZNF277Q9NRM2 450 aaPredicted RBP12.69□□□□□ -0.38
POLR2A-209ENST00000617998 LRFN2Q9ULH4 789 aa12.69□□□□□ -0.38
POLR2A-209ENST00000617998 ZFYP08048 801 aaPredicted RBP12.69□□□□□ -0.38
POLR2A-209ENST00000617998 HUNKP57058 714 aa12.69□□□□□ -0.38
POLR2A-209ENST00000617998 C9orf131Q5VYM1 1079 aa12.69□□□□□ -0.38
POLR2A-209ENST00000617998 ZNF496Q96IT1 587 aaPredicted RBP12.69□□□□□ -0.38
POLR2A-209ENST00000617998 FAM13BQ9NYF5 915 aa12.69□□□□□ -0.38
POLR2A-209ENST00000617998 MYCLP12524 364 aaPredicted RBP12.69□□□□□ -0.38
POLR2A-209ENST00000617998 PDCP20941 246 aa12.69□□□□□ -0.38
POLR2A-209ENST00000617998 ANKRD35Q8N283 1001 aa12.69□□□□□ -0.38
POLR2A-209ENST00000617998 MICAL1Q8TDZ2 1067 aa12.69□□□□□ -0.38
POLR2A-209ENST00000617998 STXBP4Q6ZWJ1 553 aa12.69□□□□□ -0.38
POLR2A-209ENST00000617998 ERMNQ8TAM6 284 aa12.69□□□□□ -0.38
POLR2A-209ENST00000617998 LGR6Q9HBX8 967 aa12.69□□□□□ -0.38
POLR2A-209ENST00000617998 FTOQ9C0B1 505 aaKnown RBP eCLIP12.68□□□□□ -0.38
POLR2A-209ENST00000617998 ZBTB21Q9ULJ3 1066 aa12.68□□□□□ -0.38
POLR2A-209ENST00000617998 GNAT2P19087 354 aa12.68□□□□□ -0.38
POLR2A-209ENST00000617998 GLIPR1L2Q4G1C9 344 aa12.68□□□□□ -0.38
POLR2A-209ENST00000617998 SYCP3Q8IZU3 236 aa12.68□□□□□ -0.38
POLR2A-209ENST00000617998 FAM193BQ96PV7 902 aaPredicted RBP12.68□□□□□ -0.38
POLR2A-209ENST00000617998 ERVK-7P63135 1459 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms