RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 ATP2B3Q16720 1220 aa20.84■□□□□ 0.93
PCDHGC3-205ENST00000617641 TTC39AQ5SRH9 613 aa20.84■□□□□ 0.93
PCDHGC3-205ENST00000617641 GJD4Q96KN9 370 aaPredicted RBP20.84■□□□□ 0.93
PCDHGC3-205ENST00000617641 AFF2P51816 1311 aa20.84■□□□□ 0.93
PCDHGC3-205ENST00000617641 SLC27A2O14975 620 aa20.84■□□□□ 0.93
PCDHGC3-205ENST00000617641 NTSR2O95665 410 aa20.84■□□□□ 0.93
PCDHGC3-205ENST00000617641 PKP1Q13835 747 aa20.84■□□□□ 0.93
PCDHGC3-205ENST00000617641 SLFNL1Q499Z3 407 aa20.84■□□□□ 0.93
PCDHGC3-205ENST00000617641 CCDC158Q5M9N0 1113 aa20.84■□□□□ 0.93
PCDHGC3-205ENST00000617641 AK7Q96M32 723 aa20.84■□□□□ 0.93
PCDHGC3-205ENST00000617641 ZKSCAN1P17029 563 aaPredicted RBP20.83■□□□□ 0.93
PCDHGC3-205ENST00000617641 GSE1Q14687 1217 aa20.83■□□□□ 0.93
PCDHGC3-205ENST00000617641 SMIM5Q71RC9 77 aa20.83■□□□□ 0.93
PCDHGC3-205ENST00000617641 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.83■□□□□ 0.93
PCDHGC3-205ENST00000617641 NHSQ6T4R5 1651 aa20.83■□□□□ 0.93
PCDHGC3-205ENST00000617641 AK2P54819 239 aa20.83■□□□□ 0.92
PCDHGC3-205ENST00000617641 MCMDC2Q4G0Z9 681 aa20.83■□□□□ 0.92
PCDHGC3-205ENST00000617641 IL27Q8NEV9 243 aa20.83■□□□□ 0.92
PCDHGC3-205ENST00000617641 GBP4Q96PP9 640 aa20.83■□□□□ 0.92
PCDHGC3-205ENST00000617641 DDX60Q8IY21 1712 aaKnown RBP20.83■□□□□ 0.92
PCDHGC3-205ENST00000617641 NUCB2P80303 420 aa20.82■□□□□ 0.92
PCDHGC3-205ENST00000617641 VGLL2Q8N8G2 317 aa20.82■□□□□ 0.92
PCDHGC3-205ENST00000617641 ZNF652Q9Y2D9 606 aa20.82■□□□□ 0.92
PCDHGC3-205ENST00000617641 CNTNAP4Q9C0A0 1308 aa20.82■□□□□ 0.92
PCDHGC3-205ENST00000617641 FKBP4Q02790 459 aaKnown RBP eCLIP20.82■□□□□ 0.92
PCDHGC3-205ENST00000617641 SCARF1Q14162 830 aa20.82■□□□□ 0.92
PCDHGC3-205ENST00000617641 LARP6Q9BRS8 491 aaKnown RBP20.82■□□□□ 0.92
PCDHGC3-205ENST00000617641 TM6SF1Q9BZW5 370 aa20.82■□□□□ 0.92
PCDHGC3-205ENST00000617641 LRP5O75197 1615 aa20.82■□□□□ 0.92
PCDHGC3-205ENST00000617641 SPEF2Q9C093 1822 aa20.81■□□□□ 0.92
PCDHGC3-205ENST00000617641 CYP2E1P05181 493 aaPredicted RBP20.81■□□□□ 0.92
PCDHGC3-205ENST00000617641 ZSWIM6Q9HCJ5 1215 aa20.81■□□□□ 0.92
PCDHGC3-205ENST00000617641 TAF6LQ9Y6J9 622 aa20.81■□□□□ 0.92
PCDHGC3-205ENST00000617641 DDX11L8A8MPP1 907 aa20.81■□□□□ 0.92
PCDHGC3-205ENST00000617641 RUFY3Q7L099 469 aa20.81■□□□□ 0.92
PCDHGC3-205ENST00000617641 INTS4Q96HW7 963 aaKnown RBP20.8■□□□□ 0.92
PCDHGC3-205ENST00000617641 SEC31BQ9NQW1 1179 aa20.8■□□□□ 0.92
PCDHGC3-205ENST00000617641 CYP46A1Q9Y6A2 500 aa20.8■□□□□ 0.92
PCDHGC3-205ENST00000617641 RNF20Q5VTR2 975 aa20.79■□□□□ 0.92
PCDHGC3-205ENST00000617641 PDRG1Q9NUG6 133 aa20.79■□□□□ 0.92
PCDHGC3-205ENST00000617641 RPAP1Q9BWH6 1393 aaPredicted RBP20.79■□□□□ 0.92
PCDHGC3-205ENST00000617641 PDE8BO95263 885 aa20.79■□□□□ 0.92
PCDHGC3-205ENST00000617641 COL9A3Q14050 684 aaPredicted RBP20.79■□□□□ 0.92
PCDHGC3-205ENST00000617641 ZMYM1Q5SVZ6 1142 aa20.79■□□□□ 0.92
PCDHGC3-205ENST00000617641 USPL1Q5W0Q7 1092 aa20.79■□□□□ 0.92
PCDHGC3-205ENST00000617641 CLEC4GQ6UXB4 293 aa20.79■□□□□ 0.92
PCDHGC3-205ENST00000617641 AEBP2Q6ZN18 517 aaPredicted RBP20.79■□□□□ 0.92
PCDHGC3-205ENST00000617641 HELBQ8NG08 1087 aaPredicted RBP20.79■□□□□ 0.92
PCDHGC3-205ENST00000617641 LAMB2P55268 1798 aa20.79■□□□□ 0.92
PCDHGC3-205ENST00000617641 PI16Q6UXB8 463 aa20.78■□□□□ 0.92
PCDHGC3-205ENST00000617641 HELLSQ9NRZ9 838 aa20.78■□□□□ 0.92
PCDHGC3-205ENST00000617641 LIMCH1Q9UPQ0 1083 aa20.78■□□□□ 0.92
PCDHGC3-205ENST00000617641 RNF113AO15541 343 aaKnown RBP20.78■□□□□ 0.92
PCDHGC3-205ENST00000617641 ZAP70P43403 619 aa20.78■□□□□ 0.92
PCDHGC3-205ENST00000617641 CCDC152Q4G0S7 254 aa20.78■□□□□ 0.92
PCDHGC3-205ENST00000617641 VPS53Q5VIR6 699 aa20.78■□□□□ 0.92
PCDHGC3-205ENST00000617641 ZDHHC9Q9Y397 364 aa20.78■□□□□ 0.92
PCDHGC3-205ENST00000617641 ATRNO75882 1429 aa20.77■□□□□ 0.92
PCDHGC3-205ENST00000617641 CCNL1Q9UK58 526 aaPredicted RBP20.77■□□□□ 0.92
PCDHGC3-205ENST00000617641 CLEC17AQ6ZS10 378 aa20.77■□□□□ 0.92
PCDHGC3-205ENST00000617641 TICAM2Q86XR7 235 aa20.77■□□□□ 0.92
PCDHGC3-205ENST00000617641 HMG20BQ9P0W2 317 aa20.77■□□□□ 0.92
PCDHGC3-205ENST00000617641 ABCC12Q96J65 1359 aa20.77■□□□□ 0.92
PCDHGC3-205ENST00000617641 MROH5Q6ZUA9 1318 aa20.76■□□□□ 0.91
PCDHGC3-205ENST00000617641 SCN7AQ01118 1682 aa20.76■□□□□ 0.91
PCDHGC3-205ENST00000617641 TRAK2O60296 914 aa20.76■□□□□ 0.91
PCDHGC3-205ENST00000617641 BAG4O95429 457 aaKnown RBP20.76■□□□□ 0.91
PCDHGC3-205ENST00000617641 RC3H1Q5TC82 1133 aaKnown RBP20.76■□□□□ 0.91
PCDHGC3-205ENST00000617641 U3KPZ7 1027 aaPredicted RBP20.76■□□□□ 0.91
PCDHGC3-205ENST00000617641 GNPATO15228 680 aa20.76■□□□□ 0.91
PCDHGC3-205ENST00000617641 PSMA5P28066 241 aa20.76■□□□□ 0.91
PCDHGC3-205ENST00000617641 MCAMP43121 646 aa20.76■□□□□ 0.91
PCDHGC3-205ENST00000617641 BICDL1Q6ZP65 573 aa20.76■□□□□ 0.91
PCDHGC3-205ENST00000617641 SEPT12Q8IYM1 358 aa20.76■□□□□ 0.91
PCDHGC3-205ENST00000617641 MPHOSPH8Q99549 860 aa20.76■□□□□ 0.91
PCDHGC3-205ENST00000617641 TRPC5Q9UL62 973 aaPredicted RBP20.76■□□□□ 0.91
PCDHGC3-205ENST00000617641 MAST3O60307 1309 aa20.75■□□□□ 0.91
PCDHGC3-205ENST00000617641 SBF2Q86WG5 1849 aa20.75■□□□□ 0.91
PCDHGC3-205ENST00000617641 RPS6KA4O75676 772 aa20.75■□□□□ 0.91
PCDHGC3-205ENST00000617641 LARGE1O95461 756 aa20.75■□□□□ 0.91
PCDHGC3-205ENST00000617641 HSP90B1P14625 803 aaKnown RBP20.75■□□□□ 0.91
PCDHGC3-205ENST00000617641 ERFEQ4G0M1 354 aa20.75■□□□□ 0.91
PCDHGC3-205ENST00000617641 BCL2L12Q9HB09 334 aa20.75■□□□□ 0.91
PCDHGC3-205ENST00000617641 PUM3Q15397 648 aaKnown RBP20.75■□□□□ 0.91
PCDHGC3-205ENST00000617641 TSGA10IPQ3SY00 556 aa20.75■□□□□ 0.91
PCDHGC3-205ENST00000617641 SRP68Q9UHB9 627 aaKnown RBP20.75■□□□□ 0.91
PCDHGC3-205ENST00000617641 RTL9Q8NET4 1388 aa20.74■□□□□ 0.91
PCDHGC3-205ENST00000617641 ONECUT3O60422 494 aaPredicted RBP20.74■□□□□ 0.91
PCDHGC3-205ENST00000617641 FGFR2P21802 821 aa20.74■□□□□ 0.91
PCDHGC3-205ENST00000617641 TBC1D9BQ66K14 1250 aa20.74■□□□□ 0.91
PCDHGC3-205ENST00000617641 AKAP11Q9UKA4 1901 aa20.74■□□□□ 0.91
PCDHGC3-205ENST00000617641 M0R2C6 588 aa20.73■□□□□ 0.91
PCDHGC3-205ENST00000617641 SNAP23O00161 211 aa20.73■□□□□ 0.91
PCDHGC3-205ENST00000617641 PHKA1P46020 1223 aa20.73■□□□□ 0.91
PCDHGC3-205ENST00000617641 BLOC1S2Q6QNY1 142 aa20.73■□□□□ 0.91
PCDHGC3-205ENST00000617641 OSBP2Q969R2 916 aa20.73■□□□□ 0.91
PCDHGC3-205ENST00000617641 FOXD4L5Q5VV16 416 aaPredicted RBP20.73■□□□□ 0.91
PCDHGC3-205ENST00000617641 AMIGO3Q86WK7 504 aa20.73■□□□□ 0.91
PCDHGC3-205ENST00000617641 FOXD4L4Q8WXT5 416 aaPredicted RBP20.73■□□□□ 0.91
PCDHGC3-205ENST00000617641 LPIN2Q92539 896 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms