RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 SSR1P43307 286 aaKnown RBP11.69□□□□□ -0.54
CUL4A-212ENST00000617546 CABP4P57796 275 aa11.69□□□□□ -0.54
CUL4A-212ENST00000617546 CREB3L3Q68CJ9 461 aa11.69□□□□□ -0.54
CUL4A-212ENST00000617546 FCHSD1Q86WN1 690 aa11.69□□□□□ -0.54
CUL4A-212ENST00000617546 ZSWIM4Q9H7M6 989 aa11.69□□□□□ -0.54
CUL4A-212ENST00000617546 ZSCAN26Q16670 478 aa11.69□□□□□ -0.54
CUL4A-212ENST00000617546 ATRIPQ8WXE1 791 aa11.69□□□□□ -0.54
CUL4A-212ENST00000617546 CCDC8Q9H0W5 538 aaPredicted RBP11.69□□□□□ -0.54
CUL4A-212ENST00000617546 BABAM1Q9NWV8 329 aa11.69□□□□□ -0.54
CUL4A-212ENST00000617546 PSDA5PKW4 1024 aaPredicted RBP11.69□□□□□ -0.54
CUL4A-212ENST00000617546 OAS2P29728 719 aaKnown RBP11.69□□□□□ -0.54
CUL4A-212ENST00000617546 KIF5BP33176 963 aa11.69□□□□□ -0.54
CUL4A-212ENST00000617546 MAP3K12Q12852 859 aa11.69□□□□□ -0.54
CUL4A-212ENST00000617546 IQCA1Q86XH1 822 aa11.69□□□□□ -0.54
CUL4A-212ENST00000617546 ZNF569Q5MCW4 686 aa11.69□□□□□ -0.54
CUL4A-212ENST00000617546 CNNM2Q9H8M5 875 aa11.69□□□□□ -0.54
CUL4A-212ENST00000617546 TCP11L1Q9NUJ3 509 aa11.69□□□□□ -0.54
CUL4A-212ENST00000617546 DESP17661 470 aa11.69□□□□□ -0.54
CUL4A-212ENST00000617546 TXNDC2Q86VQ3 553 aa11.69□□□□□ -0.54
CUL4A-212ENST00000617546 PLVAPQ9BX97 442 aa11.69□□□□□ -0.54
CUL4A-212ENST00000617546 CCDC113Q9H0I3 377 aa11.69□□□□□ -0.54
CUL4A-212ENST00000617546 TRAPPC8Q9Y2L5 1435 aa11.68□□□□□ -0.54
CUL4A-212ENST00000617546 AKR1B10O60218 316 aa11.68□□□□□ -0.54
CUL4A-212ENST00000617546 Q6ZUG5 572 aa11.68□□□□□ -0.54
CUL4A-212ENST00000617546 CATIPQ7Z7H3 387 aa11.68□□□□□ -0.54
CUL4A-212ENST00000617546 TMX1Q9H3N1 280 aa11.68□□□□□ -0.54
CUL4A-212ENST00000617546 CPSF2Q9P2I0 782 aaKnown RBP11.68□□□□□ -0.54
CUL4A-212ENST00000617546 IFIT3O14879 490 aaKnown RBP11.68□□□□□ -0.54
CUL4A-212ENST00000617546 CALML4Q96GE6 196 aa11.68□□□□□ -0.54
CUL4A-212ENST00000617546 GOPCQ9HD26 462 aa11.68□□□□□ -0.54
CUL4A-212ENST00000617546 PLB1Q6P1J6 1458 aa11.68□□□□□ -0.54
CUL4A-212ENST00000617546 TRIM21P19474 475 aaKnown RBP11.68□□□□□ -0.54
CUL4A-212ENST00000617546 TNNC1P63316 161 aa11.68□□□□□ -0.54
CUL4A-212ENST00000617546 PPFIA1Q13136 1202 aa11.68□□□□□ -0.54
CUL4A-212ENST00000617546 IQCDQ96DY2 449 aa11.68□□□□□ -0.54
CUL4A-212ENST00000617546 CCDC51Q96ER9 411 aa11.68□□□□□ -0.54
CUL4A-212ENST00000617546 UTP14AQ9BVJ6 771 aaKnown RBP11.68□□□□□ -0.54
CUL4A-212ENST00000617546 BICDL2A1A5D9 508 aa11.68□□□□□ -0.54
CUL4A-212ENST00000617546 NAA16Q6N069 864 aaPredicted RBP11.68□□□□□ -0.54
CUL4A-212ENST00000617546 FMNL3Q8IVF7 1028 aa11.68□□□□□ -0.54
CUL4A-212ENST00000617546 IFT74Q96LB3 600 aa11.68□□□□□ -0.54
CUL4A-212ENST00000617546 KRT23Q9C075 422 aa11.68□□□□□ -0.54
CUL4A-212ENST00000617546 MED4Q9NPJ6 270 aa11.68□□□□□ -0.54
CUL4A-212ENST00000617546 ANKRD62A6NC57 917 aa11.67□□□□□ -0.54
CUL4A-212ENST00000617546 POLR3DP05423 398 aaPredicted RBP11.67□□□□□ -0.54
CUL4A-212ENST00000617546 NLRP12P59046 1061 aa11.67□□□□□ -0.54
CUL4A-212ENST00000617546 WASLO00401 505 aaPredicted RBP11.67□□□□□ -0.54
CUL4A-212ENST00000617546 PSMA7O14818 248 aa11.67□□□□□ -0.54
CUL4A-212ENST00000617546 LMOD1P29536 600 aaPredicted RBP11.67□□□□□ -0.54
CUL4A-212ENST00000617546 CFAP58Q5T655 872 aa11.67□□□□□ -0.54
CUL4A-212ENST00000617546 ALG1Q9BT22 464 aa11.67□□□□□ -0.54
CUL4A-212ENST00000617546 PRM3Q9NNZ6 103 aa11.67□□□□□ -0.54
CUL4A-212ENST00000617546 FAM135BQ49AJ0 1406 aa11.67□□□□□ -0.54
CUL4A-212ENST00000617546 KIF4AO95239 1232 aa11.67□□□□□ -0.54
CUL4A-212ENST00000617546 CCDC96Q2M329 555 aa11.67□□□□□ -0.54
CUL4A-212ENST00000617546 EMILIN1Q9Y6C2 1016 aa11.67□□□□□ -0.54
CUL4A-212ENST00000617546 CCDC194A0A1B0GVG4 234 aa11.67□□□□□ -0.54
CUL4A-212ENST00000617546 RRAGBQ5VZM2 374 aa11.67□□□□□ -0.54
CUL4A-212ENST00000617546 DHX32Q7L7V1 743 aaKnown RBP11.67□□□□□ -0.54
CUL4A-212ENST00000617546 TRIM47Q96LD4 638 aa11.67□□□□□ -0.54
CUL4A-212ENST00000617546 SH3BGRP55822 239 aaPredicted RBP11.66□□□□□ -0.54
CUL4A-212ENST00000617546 WHAMMP3Q1A5X7 153 aa11.66□□□□□ -0.54
CUL4A-212ENST00000617546 CCDC77Q9BR77 488 aa11.66□□□□□ -0.54
CUL4A-212ENST00000617546 WDR62O43379 1518 aa11.66□□□□□ -0.54
CUL4A-212ENST00000617546 SEPT11Q9NVA2 429 aaKnown RBP11.66□□□□□ -0.54
CUL4A-212ENST00000617546 IGSF3O75054 1194 aa11.66□□□□□ -0.54
CUL4A-212ENST00000617546 RPS6KB1P23443 525 aa11.66□□□□□ -0.54
CUL4A-212ENST00000617546 TMEM67Q5HYA8 995 aa11.66□□□□□ -0.54
CUL4A-212ENST00000617546 CYP26C1Q6V0L0 522 aa11.66□□□□□ -0.54
CUL4A-212ENST00000617546 TMTC1Q8IUR5 882 aa11.66□□□□□ -0.54
CUL4A-212ENST00000617546 SAMD15Q9P1V8 674 aa11.66□□□□□ -0.54
CUL4A-212ENST00000617546 RGS12O14924 1447 aa11.66□□□□□ -0.54
CUL4A-212ENST00000617546 KLF18A0A0U1RQI7 1052 aa11.66□□□□□ -0.54
CUL4A-212ENST00000617546 IDH1O75874 414 aaKnown RBP11.66□□□□□ -0.54
CUL4A-212ENST00000617546 MAP2K2P36507 400 aa11.66□□□□□ -0.54
CUL4A-212ENST00000617546 KIAA0753Q2KHM9 967 aa11.66□□□□□ -0.54
CUL4A-212ENST00000617546 GAS2L3Q86XJ1 694 aa11.66□□□□□ -0.54
CUL4A-212ENST00000617546 C16orf71Q8IYS4 520 aaPredicted RBP11.66□□□□□ -0.54
CUL4A-212ENST00000617546 MLKLQ8NB16 471 aa11.66□□□□□ -0.54
CUL4A-212ENST00000617546 LARP6Q9BRS8 491 aaKnown RBP11.66□□□□□ -0.54
CUL4A-212ENST00000617546 CARD6Q9BX69 1037 aa11.66□□□□□ -0.54
CUL4A-212ENST00000617546 SEC63Q9UGP8 760 aaKnown RBP11.66□□□□□ -0.54
CUL4A-212ENST00000617546 RAD21O60216 631 aa11.66□□□□□ -0.54
CUL4A-212ENST00000617546 LACTBP83111 547 aaPredicted RBP11.66□□□□□ -0.54
CUL4A-212ENST00000617546 UNC13AQ9UPW8 1703 aa11.65□□□□□ -0.54
CUL4A-212ENST00000617546 GOLGA6CA6NDK9 693 aa11.65□□□□□ -0.54
CUL4A-212ENST00000617546 STAMBPO95630 424 aa11.65□□□□□ -0.54
CUL4A-212ENST00000617546 GOLGA6DP0CG33 693 aa11.65□□□□□ -0.54
CUL4A-212ENST00000617546 MYL6BP14649 208 aa11.65□□□□□ -0.54
CUL4A-212ENST00000617546 NLRP5P59047 1200 aa11.65□□□□□ -0.54
CUL4A-212ENST00000617546 FANCCQ00597 558 aa11.65□□□□□ -0.54
CUL4A-212ENST00000617546 LEO1Q8WVC0 666 aaPredicted RBP11.65□□□□□ -0.54
CUL4A-212ENST00000617546 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.65□□□□□ -0.549e-7■■■■■ 77.9
CUL4A-212ENST00000617546 GOLGA6AQ9NYA3 693 aa11.65□□□□□ -0.54
CUL4A-212ENST00000617546 CETN1Q12798 172 aa11.65□□□□□ -0.54
CUL4A-212ENST00000617546 EXOC1Q9NV70 894 aa11.65□□□□□ -0.54
CUL4A-212ENST00000617546 METTL24Q5JXM2 366 aa11.65□□□□□ -0.54
CUL4A-212ENST00000617546 CEP57Q86XR8 500 aa11.65□□□□□ -0.54
CUL4A-212ENST00000617546 DDX54Q8TDD1 881 aaKnown RBP11.65□□□□□ -0.54
CUL4A-212ENST00000617546 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.65□□□□□ -0.546e-7■□□□□ 9.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms