RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 FKBP4Q02790 459 aaKnown RBP eCLIP18.66■□□□□ 0.58
SEMA3B-212ENST00000616701 CCDC87Q9NVE4 849 aa18.66■□□□□ 0.58
SEMA3B-212ENST00000616701 PAG1Q9NWQ8 432 aa18.66■□□□□ 0.58
SEMA3B-212ENST00000616701 ZNF609O15014 1411 aa18.66■□□□□ 0.58
SEMA3B-212ENST00000616701 MED23Q9ULK4 1368 aa18.66■□□□□ 0.58
SEMA3B-212ENST00000616701 CSF1RP07333 972 aa18.66■□□□□ 0.58
SEMA3B-212ENST00000616701 HCLS1P14317 486 aaPredicted RBP18.66■□□□□ 0.58
SEMA3B-212ENST00000616701 HSP90AB3PQ58FF7 597 aa18.66■□□□□ 0.58
SEMA3B-212ENST00000616701 PDRG1Q9NUG6 133 aa18.66■□□□□ 0.58
SEMA3B-212ENST00000616701 CIAO1O76071 339 aa18.65■□□□□ 0.58
SEMA3B-212ENST00000616701 ZKSCAN1P17029 563 aaPredicted RBP18.65■□□□□ 0.58
SEMA3B-212ENST00000616701 TAF5LO75529 589 aa18.65■□□□□ 0.58
SEMA3B-212ENST00000616701 CTSWP56202 376 aa18.65■□□□□ 0.58
SEMA3B-212ENST00000616701 LDHAL6AQ6ZMR3 332 aa18.65■□□□□ 0.58
SEMA3B-212ENST00000616701 EIF5P55010 431 aaKnown RBP18.64■□□□□ 0.57
SEMA3B-212ENST00000616701 METTL24Q5JXM2 366 aa18.64■□□□□ 0.57
SEMA3B-212ENST00000616701 XAGE2Q96GT9 111 aa18.64■□□□□ 0.57
SEMA3B-212ENST00000616701 PALLDQ8WX93 1383 aa18.64■□□□□ 0.57
SEMA3B-212ENST00000616701 SLIT2O94813 1529 aa18.64■□□□□ 0.57
SEMA3B-212ENST00000616701 PI16Q6UXB8 463 aa18.64■□□□□ 0.57
SEMA3B-212ENST00000616701 KBTBD3Q8NAB2 608 aa18.64■□□□□ 0.57
SEMA3B-212ENST00000616701 PLA2G12BQ9BX93 195 aa18.64■□□□□ 0.57
SEMA3B-212ENST00000616701 CNNM1Q9NRU3 951 aa18.64■□□□□ 0.57
SEMA3B-212ENST00000616701 CYP46A1Q9Y6A2 500 aa18.64■□□□□ 0.57
SEMA3B-212ENST00000616701 SUSD4Q5VX71 490 aa18.63■□□□□ 0.57
SEMA3B-212ENST00000616701 GPR108Q9NPR9 543 aa18.63■□□□□ 0.57
SEMA3B-212ENST00000616701 SCARF1Q14162 830 aa18.63■□□□□ 0.57
SEMA3B-212ENST00000616701 TTC39AQ5SRH9 613 aa18.63■□□□□ 0.57
SEMA3B-212ENST00000616701 HELBQ8NG08 1087 aaPredicted RBP18.63■□□□□ 0.57
SEMA3B-212ENST00000616701 NUP98P52948 1817 aa18.63■□□□□ 0.57
SEMA3B-212ENST00000616701 BARGINQ6ZT62 677 aa18.63■□□□□ 0.57
SEMA3B-212ENST00000616701 IPO4Q8TEX9 1081 aaKnown RBP18.63■□□□□ 0.57
SEMA3B-212ENST00000616701 ZSWIM6Q9HCJ5 1215 aa18.63■□□□□ 0.57
SEMA3B-212ENST00000616701 LIMCH1Q9UPQ0 1083 aa18.63■□□□□ 0.57
SEMA3B-212ENST00000616701 GOLGA6L22H0YM25 854 aa18.62■□□□□ 0.57
SEMA3B-212ENST00000616701 VPS53Q5VIR6 699 aa18.62■□□□□ 0.57
SEMA3B-212ENST00000616701 CCDC83Q8IWF9 413 aa18.62■□□□□ 0.57
SEMA3B-212ENST00000616701 PRDM10Q9NQV6 1147 aa18.62■□□□□ 0.57
SEMA3B-212ENST00000616701 ANKRD18BA2A2Z9 1011 aa18.62■□□□□ 0.57
SEMA3B-212ENST00000616701 NCLP19338 710 aaKnown RBP18.62■□□□□ 0.57
SEMA3B-212ENST00000616701 MCMDC2Q4G0Z9 681 aa18.62■□□□□ 0.57
SEMA3B-212ENST00000616701 ZNF34Q8IZ26 560 aa18.62■□□□□ 0.57
SEMA3B-212ENST00000616701 NECAB1Q8N987 351 aa18.62■□□□□ 0.57
SEMA3B-212ENST00000616701 CDHR2Q9BYE9 1310 aa18.62■□□□□ 0.57
SEMA3B-212ENST00000616701 ERVV-1B6SEH8 477 aa18.61■□□□□ 0.57
SEMA3B-212ENST00000616701 L1TD1Q5T7N2 865 aaKnown RBP18.61■□□□□ 0.57
SEMA3B-212ENST00000616701 KCNB2Q92953 911 aa18.61■□□□□ 0.57
SEMA3B-212ENST00000616701 SNAP23O00161 211 aa18.6■□□□□ 0.57
SEMA3B-212ENST00000616701 CCDC158Q5M9N0 1113 aa18.6■□□□□ 0.57
SEMA3B-212ENST00000616701 INTS4Q96HW7 963 aaKnown RBP18.6■□□□□ 0.57
SEMA3B-212ENST00000616701 PDE8AO60658 829 aa18.6■□□□□ 0.57
SEMA3B-212ENST00000616701 PRPF40AO75400 957 aaKnown RBP18.6■□□□□ 0.57
SEMA3B-212ENST00000616701 RIPOR2Q9Y4F9 1068 aa18.6■□□□□ 0.57
SEMA3B-212ENST00000616701 DDX49Q9Y6V7 483 aaKnown RBP18.6■□□□□ 0.57
SEMA3B-212ENST00000616701 A0A0G2JLW4 131 aa18.6■□□□□ 0.57
SEMA3B-212ENST00000616701 ATP2B3Q16720 1220 aa18.6■□□□□ 0.57
SEMA3B-212ENST00000616701 MYH14Q7Z406 1995 aaKnown RBP18.6■□□□□ 0.57
SEMA3B-212ENST00000616701 RNF20Q5VTR2 975 aa18.59■□□□□ 0.57
SEMA3B-212ENST00000616701 SEC31BQ9NQW1 1179 aa18.59■□□□□ 0.57
SEMA3B-212ENST00000616701 NIP7Q9Y221 180 aaKnown RBP eCLIP18.59■□□□□ 0.57
SEMA3B-212ENST00000616701 AKAP2Q9Y2D5 859 aa18.59■□□□□ 0.57
SEMA3B-212ENST00000616701 CAMTA2O94983 1202 aa18.59■□□□□ 0.57
SEMA3B-212ENST00000616701 CLCN1P35523 988 aa18.59■□□□□ 0.57
SEMA3B-212ENST00000616701 ZAP70P43403 619 aa18.59■□□□□ 0.57
SEMA3B-212ENST00000616701 RIC1Q4ADV7 1423 aa18.59■□□□□ 0.57
SEMA3B-212ENST00000616701 BRD1O95696 1058 aa18.58■□□□□ 0.57
SEMA3B-212ENST00000616701 ME3Q16798 604 aa18.58■□□□□ 0.57
SEMA3B-212ENST00000616701 TPRNQ4KMQ1 711 aa18.58■□□□□ 0.57
SEMA3B-212ENST00000616701 BLOC1S2Q6QNY1 142 aa18.58■□□□□ 0.57
SEMA3B-212ENST00000616701 CLEC17AQ6ZS10 378 aa18.58■□□□□ 0.57
SEMA3B-212ENST00000616701 TM6SF1Q9BZW5 370 aa18.58■□□□□ 0.56
SEMA3B-212ENST00000616701 TPCN1Q9ULQ1 816 aa18.58■□□□□ 0.56
SEMA3B-212ENST00000616701 BCL9LQ86UU0 1499 aa18.57■□□□□ 0.56
SEMA3B-212ENST00000616701 LINC00116Q8NCU8 138 aa18.57■□□□□ 0.56
SEMA3B-212ENST00000616701 STK3Q13188 491 aa18.57■□□□□ 0.56
SEMA3B-212ENST00000616701 BICDL1Q6ZP65 573 aa18.57■□□□□ 0.56
SEMA3B-212ENST00000616701 LRRC2Q9BYS8 371 aa18.57■□□□□ 0.56
SEMA3B-212ENST00000616701 LMBRD1Q9NUN5 540 aa18.57■□□□□ 0.56
SEMA3B-212ENST00000616701 ANKRD36CQ5JPF3 1778 aa18.57■□□□□ 0.56
SEMA3B-212ENST00000616701 M0R2C6 588 aa18.57■□□□□ 0.56
SEMA3B-212ENST00000616701 CYP21A2P08686 494 aa18.57■□□□□ 0.56
SEMA3B-212ENST00000616701 ST3GAL1Q11201 340 aa18.57■□□□□ 0.56
SEMA3B-212ENST00000616701 UTP14AQ9BVJ6 771 aaKnown RBP18.57■□□□□ 0.56
SEMA3B-212ENST00000616701 SMC3Q9UQE7 1217 aa18.57■□□□□ 0.56
SEMA3B-212ENST00000616701 RPAP1Q9BWH6 1393 aaPredicted RBP18.56■□□□□ 0.56
SEMA3B-212ENST00000616701 SH3TC1Q8TE82 1336 aa18.56■□□□□ 0.56
SEMA3B-212ENST00000616701 GOLGA6L3A6NEY3 463 aa18.56■□□□□ 0.56
SEMA3B-212ENST00000616701 PSMA5P28066 241 aa18.56■□□□□ 0.56
SEMA3B-212ENST00000616701 WASHC4Q2M389 1173 aa18.56■□□□□ 0.56
SEMA3B-212ENST00000616701 GDPD2Q9HCC8 539 aa18.56■□□□□ 0.56
SEMA3B-212ENST00000616701 USP21Q9UK80 565 aa18.56■□□□□ 0.56
SEMA3B-212ENST00000616701 RNF113AO15541 343 aaKnown RBP18.56■□□□□ 0.56
SEMA3B-212ENST00000616701 VPS72Q15906 364 aa18.56■□□□□ 0.56
SEMA3B-212ENST00000616701 ZFP91Q96JP5 570 aaPredicted RBP18.56■□□□□ 0.56
SEMA3B-212ENST00000616701 MAST3O60307 1309 aa18.55■□□□□ 0.56
SEMA3B-212ENST00000616701 RPS6KB1P23443 525 aa18.55■□□□□ 0.56
SEMA3B-212ENST00000616701 ZMYM1Q5SVZ6 1142 aa18.55■□□□□ 0.56
SEMA3B-212ENST00000616701 OSBP2Q969R2 916 aa18.55■□□□□ 0.56
SEMA3B-212ENST00000616701 NWD2Q9ULI1 1742 aa18.55■□□□□ 0.56
SEMA3B-212ENST00000616701 MCAMP43121 646 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms