RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, human

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-223	ENST00000616010	TTC41P	Q6P2S7	1318 aa		28.73	■■■□□ 2.19
CCND3-223	ENST00000616010	C8orf34	Q49A92	452 aa		28.73	■■■□□ 2.19
CCND3-223	ENST00000616010	CRY2	Q49AN0	593 aa		28.73	■■■□□ 2.19
CCND3-223	ENST00000616010	VGLL2	Q8N8G2	317 aa		28.72	■■■□□ 2.19
CCND3-223	ENST00000616010	RPGR	Q92834	1020 aa	Known RBP	28.72	■■■□□ 2.19
CCND3-223	ENST00000616010		A0A1B0GUL7	405 aa		28.72	■■■□□ 2.19
CCND3-223	ENST00000616010	PI4K2B	Q8TCG2	481 aa		28.72	■■■□□ 2.19
CCND3-223	ENST00000616010	ECHDC1	Q9NTX5	307 aa		28.72	■■■□□ 2.19
CCND3-223	ENST00000616010	AKAP2	Q9Y2D5	859 aa		28.72	■■■□□ 2.19
CCND3-223	ENST00000616010		A0A1B0GUL6	1792 aa		28.71	■■■□□ 2.19
CCND3-223	ENST00000616010	NEUROD6	Q96NK8	337 aa		28.71	■■■□□ 2.19
CCND3-223	ENST00000616010	DBNDD2	Q9BQY9	259 aa		28.71	■■■□□ 2.19
CCND3-223	ENST00000616010	TIMM10	P62072	90 aa		28.7	■■■□□ 2.19
CCND3-223	ENST00000616010	SLC16A10	Q8TF71	515 aa		28.7	■■■□□ 2.19
CCND3-223	ENST00000616010	BRIP1	Q9BX63	1249 aa		28.7	■■■□□ 2.19
CCND3-223	ENST00000616010	BSDC1	Q9NW68	430 aa	Predicted RBP	28.7	■■■□□ 2.19
CCND3-223	ENST00000616010	RPS8	P62241	208 aa	Known RBP	28.7	■■■□□ 2.18
CCND3-223	ENST00000616010	HELB	Q8NG08	1087 aa	Predicted RBP	28.7	■■■□□ 2.18
CCND3-223	ENST00000616010	PDE8B	O95263	885 aa		28.69	■■■□□ 2.18
CCND3-223	ENST00000616010	ATP2B3	Q16720	1220 aa		28.69	■■■□□ 2.18
CCND3-223	ENST00000616010	BACH2	Q9BYV9	841 aa		28.69	■■■□□ 2.18
CCND3-223	ENST00000616010	COL11A2	P13942	1736 aa	Predicted RBP	28.68	■■■□□ 2.18
CCND3-223	ENST00000616010	KLRG2	A4D1S0	409 aa	Predicted RBP	28.68	■■■□□ 2.18
CCND3-223	ENST00000616010	ERC2	O15083	957 aa		28.68	■■■□□ 2.18
CCND3-223	ENST00000616010	CHRND	Q07001	517 aa		28.68	■■■□□ 2.18
CCND3-223	ENST00000616010	GRAP	Q13588	217 aa		28.68	■■■□□ 2.18
CCND3-223	ENST00000616010	GRAPL	Q8TC17	118 aa	Predicted RBP	28.68	■■■□□ 2.18
CCND3-223	ENST00000616010	GLRX3	O76003	335 aa	Known RBP	28.67	■■■□□ 2.18
CCND3-223	ENST00000616010	SDS	P20132	328 aa		28.67	■■■□□ 2.18
CCND3-223	ENST00000616010	R3HDM1	Q15032	1099 aa	Known RBP	28.67	■■■□□ 2.18
CCND3-223	ENST00000616010	TAF5L	O75529	589 aa		28.66	■■■□□ 2.18
CCND3-223	ENST00000616010	RBM17	Q96I25	401 aa	Known RBP	28.66	■■■□□ 2.18
CCND3-223	ENST00000616010	ARAP2	Q8WZ64	1704 aa		28.66	■■■□□ 2.18
CCND3-223	ENST00000616010	PUM3	Q15397	648 aa	Known RBP	28.65	■■■□□ 2.18
CCND3-223	ENST00000616010	PDE6B	P35913	854 aa		28.65	■■■□□ 2.18
CCND3-223	ENST00000616010	ADORA1	P30542	326 aa		28.64	■■■□□ 2.18
CCND3-223	ENST00000616010	MINPP1	Q9UNW1	487 aa		28.64	■■■□□ 2.18
CCND3-223	ENST00000616010	AK9	Q5TCS8	1911 aa		28.64	■■■□□ 2.17
CCND3-223	ENST00000616010	TRIM6-TRIM34	B2RNG4	842 aa		28.64	■■■□□ 2.17
CCND3-223	ENST00000616010	XAGE2	Q96GT9	111 aa		28.64	■■■□□ 2.17
CCND3-223	ENST00000616010	ZBTB7A	O95365	584 aa		28.63	■■■□□ 2.17
CCND3-223	ENST00000616010	MAP4K4	O95819	1239 aa	Predicted RBP	28.63	■■■□□ 2.17
CCND3-223	ENST00000616010	HOXA10	P31260	410 aa	Predicted RBP	28.63	■■■□□ 2.17
CCND3-223	ENST00000616010	TSHZ2	Q9NRE2	1034 aa		28.63	■■■□□ 2.17
CCND3-223	ENST00000616010	FGFR2	P21802	821 aa		28.62	■■■□□ 2.17
CCND3-223	ENST00000616010	ILDR2	Q71H61	639 aa		28.62	■■■□□ 2.17
CCND3-223	ENST00000616010	LPIN2	Q92539	896 aa		28.62	■■■□□ 2.17
CCND3-223	ENST00000616010	RILPL2	Q969X0	211 aa		28.62	■■■□□ 2.17
CCND3-223	ENST00000616010	SNAP23	O00161	211 aa		28.61	■■■□□ 2.17
CCND3-223	ENST00000616010	SRGN	P10124	158 aa		28.61	■■■□□ 2.17
CCND3-223	ENST00000616010	GORAB	Q5T7V8	394 aa		28.61	■■■□□ 2.17
CCND3-223	ENST00000616010	BOLA2	Q9H3K6	86 aa		28.61	■■■□□ 2.17
CCND3-223	ENST00000616010	CRAMP1	Q96RY5	1269 aa		28.6	■■■□□ 2.17
CCND3-223	ENST00000616010	SLC5A1	P13866	664 aa		28.6	■■■□□ 2.17
CCND3-223	ENST00000616010	ATP5J	P18859	108 aa		28.6	■■■□□ 2.17
CCND3-223	ENST00000616010	CDC45	O75419	566 aa		28.59	■■■□□ 2.17
CCND3-223	ENST00000616010	NPR1	P16066	1061 aa		28.59	■■■□□ 2.17
CCND3-223	ENST00000616010	SLC51A	Q86UW1	340 aa		28.59	■■■□□ 2.17
CCND3-223	ENST00000616010	C10orf71	Q711Q0	1435 aa		28.58	■■■□□ 2.17
CCND3-223	ENST00000616010	PSD	A5PKW4	1024 aa	Predicted RBP	28.58	■■■□□ 2.17
CCND3-223	ENST00000616010	CCDC158	Q5M9N0	1113 aa		28.58	■■■□□ 2.17
CCND3-223	ENST00000616010	MTFR1L	Q9H019	292 aa		28.58	■■■□□ 2.17
CCND3-223	ENST00000616010	TBC1D9	Q6ZT07	1266 aa		28.57	■■■□□ 2.16
CCND3-223	ENST00000616010	CNTROB	Q8N137	903 aa		28.57	■■■□□ 2.16
CCND3-223	ENST00000616010	TTC39A	Q5SRH9	613 aa		28.57	■■■□□ 2.16
CCND3-223	ENST00000616010	C2CD5	Q86YS7	1000 aa		28.57	■■■□□ 2.16
CCND3-223	ENST00000616010	ANKRD2	Q9GZV1	360 aa		28.57	■■■□□ 2.16
CCND3-223	ENST00000616010	CACNA1S	Q13698	1873 aa		28.57	■■■□□ 2.16
CCND3-223	ENST00000616010	IFIT1	P09914	478 aa	Known RBP	28.56	■■■□□ 2.16
CCND3-223	ENST00000616010	MASTL	Q96GX5	879 aa		28.56	■■■□□ 2.16
CCND3-223	ENST00000616010	ATF5	Q9Y2D1	282 aa	Predicted RBP	28.56	■■■□□ 2.16
CCND3-223	ENST00000616010	BBOX1	O75936	387 aa		28.55	■■■□□ 2.16
CCND3-223	ENST00000616010	LRRC37A	A6NMS7	1700 aa		28.55	■■■□□ 2.16
CCND3-223	ENST00000616010		H0YIN7	160 aa		28.54	■■■□□ 2.16
CCND3-223	ENST00000616010	DNAJC2	Q99543	621 aa	Known RBP	28.54	■■■□□ 2.16
CCND3-223	ENST00000616010	NDUFB9	Q9Y6M9	179 aa		28.54	■■■□□ 2.16
CCND3-223	ENST00000616010	WTIP	A6NIX2	430 aa	Predicted RBP	28.53	■■■□□ 2.16
CCND3-223	ENST00000616010	PPEF1	O14829	653 aa	Predicted RBP	28.53	■■■□□ 2.16
CCND3-223	ENST00000616010	KCNJ4	P48050	445 aa		28.53	■■■□□ 2.16
CCND3-223	ENST00000616010	UBE4A	Q14139	1066 aa		28.53	■■■□□ 2.16
CCND3-223	ENST00000616010	ZNF622	Q969S3	477 aa	Known RBP eCLIP	28.53	■■■□□ 2.16
CCND3-223	ENST00000616010	HAUS7	Q99871	368 aa		28.53	■■■□□ 2.16
CCND3-223	ENST00000616010	ANKIB1	Q9P2G1	1089 aa		28.53	■■■□□ 2.16
CCND3-223	ENST00000616010	SEC24B	O95487	1268 aa		28.52	■■■□□ 2.16
CCND3-223	ENST00000616010	POLD1	P28340	1107 aa		28.52	■■■□□ 2.16
CCND3-223	ENST00000616010	CHRNA5	P30532	468 aa		28.52	■■■□□ 2.16
CCND3-223	ENST00000616010	ALDH1B1	P30837	517 aa		28.52	■■■□□ 2.16
CCND3-223	ENST00000616010	CCDC102B	Q68D86	513 aa		28.52	■■■□□ 2.16
CCND3-223	ENST00000616010	EVI5L	Q96CN4	794 aa		28.52	■■■□□ 2.16
CCND3-223	ENST00000616010	PHKA1	P46020	1223 aa		28.52	■■■□□ 2.16
CCND3-223	ENST00000616010	EDC3	Q96F86	508 aa	Known RBP	28.52	■■■□□ 2.16
CCND3-223	ENST00000616010	CASC1	Q6TDU7	716 aa		28.51	■■■□□ 2.15
CCND3-223	ENST00000616010	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	28.51	■■■□□ 2.15
CCND3-223	ENST00000616010	KIF13B	Q9NQT8	1826 aa		28.51	■■■□□ 2.15
CCND3-223	ENST00000616010	XDH	P47989	1333 aa		28.51	■■■□□ 2.15
CCND3-223	ENST00000616010	TMC4	Q7Z404	712 aa		28.5	■■■□□ 2.15
CCND3-223	ENST00000616010	DLEC1	Q9Y238	1755 aa		28.5	■■■□□ 2.15
CCND3-223	ENST00000616010	STYK1	Q6J9G0	422 aa		28.5	■■■□□ 2.15
CCND3-223	ENST00000616010	ZNF804B	A4D1E1	1349 aa		28.49	■■■□□ 2.15
CCND3-223	ENST00000616010	SCARF1	Q14162	830 aa		28.49	■■■□□ 2.15

Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms