RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 NLRP2Q9NX02 1062 aa3.62□□□□□ -1.83
CBWD3-209ENST00000614377 HOXC10Q9NYD6 342 aa3.62□□□□□ -1.83
CBWD3-209ENST00000614377 BLOC1S6Q9UL45 172 aa3.62□□□□□ -1.83
CBWD3-209ENST00000614377 PEG3Q9GZU2 1588 aa3.62□□□□□ -1.83
CBWD3-209ENST00000614377 UQCRHLA0A096LP55 91 aa3.61□□□□□ -1.83
CBWD3-209ENST00000614377 KINO60870 393 aaKnown RBP3.61□□□□□ -1.83
CBWD3-209ENST00000614377 CAND2O75155 1236 aa3.61□□□□□ -1.83
CBWD3-209ENST00000614377 UQCRHP07919 91 aa3.61□□□□□ -1.83
CBWD3-209ENST00000614377 VARSP26640 1264 aaKnown RBP3.61□□□□□ -1.83
CBWD3-209ENST00000614377 ADCY2Q08462 1091 aa3.61□□□□□ -1.83
CBWD3-209ENST00000614377 VPS72Q15906 364 aa3.61□□□□□ -1.83
CBWD3-209ENST00000614377 MFSD4BQ5TF39 518 aa3.61□□□□□ -1.83
CBWD3-209ENST00000614377 NCAPG2Q86XI2 1143 aa3.61□□□□□ -1.83
CBWD3-209ENST00000614377 NLGN1Q8N2Q7 840 aa3.61□□□□□ -1.83
CBWD3-209ENST00000614377 STAG2Q8N3U4 1231 aa3.61□□□□□ -1.83
CBWD3-209ENST00000614377 GPR161Q8N6U8 529 aaKnown RBP3.61□□□□□ -1.83
CBWD3-209ENST00000614377 SLC43A3Q8NBI5 491 aa3.61□□□□□ -1.83
CBWD3-209ENST00000614377 ENOX1Q8TC92 643 aaKnown RBP3.61□□□□□ -1.83
CBWD3-209ENST00000614377 SMCR8Q8TEV9 937 aaPredicted RBP3.61□□□□□ -1.83
CBWD3-209ENST00000614377 PPM1EQ8WY54 764 aa3.61□□□□□ -1.83
CBWD3-209ENST00000614377 PCDH12Q9NPG4 1184 aa3.61□□□□□ -1.83
CBWD3-209ENST00000614377 TRPV5Q9NQA5 729 aa3.61□□□□□ -1.83
CBWD3-209ENST00000614377 SFMBT1Q9UHJ3 866 aa3.61□□□□□ -1.83
CBWD3-209ENST00000614377 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.61□□□□□ -1.83
CBWD3-209ENST00000614377 UPP2O95045 317 aa3.61□□□□□ -1.83
CBWD3-209ENST00000614377 FDX1P10109 184 aa3.61□□□□□ -1.83
CBWD3-209ENST00000614377 HOXA10P31260 410 aaPredicted RBP3.61□□□□□ -1.83
CBWD3-209ENST00000614377 NAP1L1P55209 391 aaKnown RBP3.61□□□□□ -1.83
CBWD3-209ENST00000614377 HMGN5P82970 282 aaKnown RBP3.61□□□□□ -1.83
CBWD3-209ENST00000614377 KCTD2Q14681 263 aa3.61□□□□□ -1.83
CBWD3-209ENST00000614377 TCEAL1Q15170 157 aa3.61□□□□□ -1.83
CBWD3-209ENST00000614377 TBC1D25Q3MII6 688 aa3.61□□□□□ -1.83
CBWD3-209ENST00000614377 C16orf87Q6PH81 154 aa3.61□□□□□ -1.83
CBWD3-209ENST00000614377 KRT77Q7Z794 578 aa3.61□□□□□ -1.83
CBWD3-209ENST00000614377 PHC3Q8NDX5 983 aa3.61□□□□□ -1.83
CBWD3-209ENST00000614377 ZNF512BQ96KM6 892 aaPredicted RBP3.61□□□□□ -1.83
CBWD3-209ENST00000614377 CEP89Q96ST8 783 aa3.61□□□□□ -1.83
CBWD3-209ENST00000614377 ZHX3Q9H4I2 956 aa3.61□□□□□ -1.83
CBWD3-209ENST00000614377 TYW1Q9NV66 732 aaKnown RBP3.61□□□□□ -1.83
CBWD3-209ENST00000614377 DNMT3LQ9UJW3 386 aa3.61□□□□□ -1.83
CBWD3-209ENST00000614377 PRR12Q9ULL5 1215 aa3.61□□□□□ -1.83
CBWD3-209ENST00000614377 THRAP3Q9Y2W1 955 aaKnown RBP3.61□□□□□ -1.83
CBWD3-209ENST00000614377 SPAG9O60271 1321 aaKnown RBP3.6□□□□□ -1.83
CBWD3-209ENST00000614377 TMEM88BA6NKF7 163 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 H0YHG0 523 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 HTATSF1O43719 755 aaKnown RBP3.6□□□□□ -1.83
CBWD3-209ENST00000614377 TPPPO94811 219 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 IMPDH2P12268 514 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 HOXD10P28358 340 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 IRX1P78414 480 aaPredicted RBP3.6□□□□□ -1.83
CBWD3-209ENST00000614377 SARNPP82979 210 aaKnown RBP3.6□□□□□ -1.83
CBWD3-209ENST00000614377 DCTN1Q14203 1278 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 PDIA5Q14554 519 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 PKN1Q16512 942 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 SLC5A9Q2M3M2 681 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 FILIP1Q7Z7B0 1213 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 TTC30AQ86WT1 665 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 FMNL3Q8IVF7 1028 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 COL25A1Q9BXS0 654 aaPredicted RBP3.6□□□□□ -1.83
CBWD3-209ENST00000614377 RMI1Q9H9A7 625 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 DDX56Q9NY93 547 aaKnown RBP3.6□□□□□ -1.83
CBWD3-209ENST00000614377 RSPH14Q9UHP6 348 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.6□□□□□ -1.83
CBWD3-209ENST00000614377 BBOX1O75936 387 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 SETSIPP0DME0 302 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 MYBL2P10244 700 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 KCNA2P16389 499 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 ATP2B1P20020 1258 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 CHMLP26374 656 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 ATICP31939 592 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 CTHP32929 405 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 CBX1P83916 185 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 PSMD2Q13200 908 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 CCDC92Q53HC0 331 aaPredicted RBP3.6□□□□□ -1.83
CBWD3-209ENST00000614377 OTUD6AQ7L8S5 288 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 RBM12BQ8IXT5 1001 aaKnown RBP3.6□□□□□ -1.83
CBWD3-209ENST00000614377 LINC00528Q8N1L1 170 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 VPS37AQ8NEZ2 397 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 TDRD7Q8NHU6 1098 aaKnown RBP3.6□□□□□ -1.83
CBWD3-209ENST00000614377 C17orf50Q8WW18 174 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 CFAP53Q96M91 514 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 FEZ1Q99689 392 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 KLF16Q9BXK1 252 aaPredicted RBP3.6□□□□□ -1.83
CBWD3-209ENST00000614377 ACAD8Q9UKU7 415 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 PCDHGC3Q9UN70 934 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 IFRD1O00458 451 aaPredicted RBP3.6□□□□□ -1.83
CBWD3-209ENST00000614377 CCP110O43303 1012 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 NR3C2P08235 984 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 STIP1P31948 543 aaKnown RBP3.6□□□□□ -1.83
CBWD3-209ENST00000614377 MRE11P49959 708 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 KIAA2012Q0VF49 1180 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 TRAF1Q13077 416 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 PTPRNQ16849 979 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 HS1BP3Q53T59 392 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 NOM1Q5C9Z4 860 aaKnown RBP3.6□□□□□ -1.83
CBWD3-209ENST00000614377 ZNF385CQ66K41 422 aaPredicted RBP3.6□□□□□ -1.83
CBWD3-209ENST00000614377 CCDC91Q7Z6B0 441 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 SUGP1Q8IWZ8 645 aaKnown RBP3.6□□□□□ -1.83
CBWD3-209ENST00000614377 FAM174AQ8TBP5 190 aa3.6□□□□□ -1.83
CBWD3-209ENST00000614377 NEK9Q8TD19 979 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms