RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 SYT10Q6XYQ8 523 aa14.04□□□□□ -0.16
HLCS-207ENST00000612277 PNMA8AQ86V59 439 aaPredicted RBP14.04□□□□□ -0.16
HLCS-207ENST00000612277 SPATS2LQ9NUQ6 558 aaKnown RBP14.04□□□□□ -0.16
HLCS-207ENST00000612277 EEF2P13639 858 aaKnown RBP14.04□□□□□ -0.16
HLCS-207ENST00000612277 U2AF2P26368 475 aaKnown RBP eCLIP14.04□□□□□ -0.16
HLCS-207ENST00000612277 MROH2BQ7Z745 1585 aa14.04□□□□□ -0.16
HLCS-207ENST00000612277 GOLGA6CA6NDK9 693 aa14.03□□□□□ -0.16
HLCS-207ENST00000612277 GOLGA6DP0CG33 693 aa14.03□□□□□ -0.16
HLCS-207ENST00000612277 PPP2R3AQ06190 1150 aa14.03□□□□□ -0.16
HLCS-207ENST00000612277 TTF1Q15361 905 aaPredicted RBP14.03□□□□□ -0.16
HLCS-207ENST00000612277 VSIG1Q86XK7 387 aa14.03□□□□□ -0.16
HLCS-207ENST00000612277 ERO1AQ96HE7 468 aa14.03□□□□□ -0.16
HLCS-207ENST00000612277 GOLGA6AQ9NYA3 693 aa14.03□□□□□ -0.16
HLCS-207ENST00000612277 RSPH3Q86UC2 560 aa14.03□□□□□ -0.16
HLCS-207ENST00000612277 CXorf38Q8TB03 319 aa14.03□□□□□ -0.16
HLCS-207ENST00000612277 MKNK2Q9HBH9 465 aa14.03□□□□□ -0.16
HLCS-207ENST00000612277 PLCB3Q01970 1234 aa14.03□□□□□ -0.16
HLCS-207ENST00000612277 IRX4P78413 519 aa14.03□□□□□ -0.16
HLCS-207ENST00000612277 ZBTB9Q96C00 473 aa14.03□□□□□ -0.16
HLCS-207ENST00000612277 TBCAO75347 108 aaKnown RBP14.03□□□□□ -0.16
HLCS-207ENST00000612277 POLR3DP05423 398 aaPredicted RBP14.03□□□□□ -0.16
HLCS-207ENST00000612277 SYKP43405 635 aa14.03□□□□□ -0.16
HLCS-207ENST00000612277 KARSQ15046 597 aaKnown RBP14.03□□□□□ -0.16
HLCS-207ENST00000612277 SPINK5Q9NQ38 1064 aaPredicted RBP14.03□□□□□ -0.16
HLCS-207ENST00000612277 MAP3K7CLP57077 242 aa14.02□□□□□ -0.16
HLCS-207ENST00000612277 USP37Q86T82 979 aa14.02□□□□□ -0.16
HLCS-207ENST00000612277 GPR161Q8N6U8 529 aaKnown RBP14.02□□□□□ -0.16
HLCS-207ENST00000612277 CCDC26Q8TAB7 109 aa14.02□□□□□ -0.16
HLCS-207ENST00000612277 GUCA1BQ9UMX6 200 aa14.02□□□□□ -0.16
HLCS-207ENST00000612277 FHOD3Q2V2M9 1422 aa14.02□□□□□ -0.16
HLCS-207ENST00000612277 LUC7L3O95232 432 aaKnown RBP14.02□□□□□ -0.16
HLCS-207ENST00000612277 AFAP1L2Q8N4X5 818 aa14.02□□□□□ -0.16
HLCS-207ENST00000612277 AOPEPQ8N6M6 819 aa14.02□□□□□ -0.16
HLCS-207ENST00000612277 NAPBQ9H115 298 aa14.02□□□□□ -0.16
HLCS-207ENST00000612277 ZSCAN16Q9H4T2 348 aaPredicted RBP14.02□□□□□ -0.16
HLCS-207ENST00000612277 MINDY4BA8MYZ0 360 aa14.02□□□□□ -0.17
HLCS-207ENST00000612277 UBA7P41226 1012 aa14.02□□□□□ -0.17
HLCS-207ENST00000612277 INPP1P49441 399 aa14.02□□□□□ -0.17
HLCS-207ENST00000612277 KIF1BPQ96EK5 621 aa14.02□□□□□ -0.17
HLCS-207ENST00000612277 PANK2Q9BZ23 570 aa14.02□□□□□ -0.17
HLCS-207ENST00000612277 BCAP29Q9UHQ4 241 aa14.02□□□□□ -0.17
HLCS-207ENST00000612277 OPHN1O60890 802 aa14.02□□□□□ -0.17
HLCS-207ENST00000612277 TDRD9Q8NDG6 1382 aaKnown RBP14.02□□□□□ -0.17
HLCS-207ENST00000612277 XRCC6P12956 609 aaKnown RBP eCLIP14.02□□□□□ -0.17
HLCS-207ENST00000612277 EVCP57679 992 aa14.02□□□□□ -0.17
HLCS-207ENST00000612277 PRPF31Q8WWY3 499 aaKnown RBP14.02□□□□□ -0.17
HLCS-207ENST00000612277 ZBTB12Q9Y330 459 aaPredicted RBP14.02□□□□□ -0.17
HLCS-207ENST00000612277 RAPGEF2Q9Y4G8 1499 aa14.02□□□□□ -0.17
HLCS-207ENST00000612277 DNAJC8O75937 253 aaPredicted RBP14.01□□□□□ -0.17
HLCS-207ENST00000612277 CCT2P78371 535 aaKnown RBP14.01□□□□□ -0.17
HLCS-207ENST00000612277 CATIPQ7Z7H3 387 aa14.01□□□□□ -0.17
HLCS-207ENST00000612277 CHMP4BP1P59074 171 aa14.01□□□□□ -0.17
HLCS-207ENST00000612277 GEN1Q17RS7 908 aa14.01□□□□□ -0.17
HLCS-207ENST00000612277 IQCA1Q86XH1 822 aa14.01□□□□□ -0.17
HLCS-207ENST00000612277 FAN1Q9Y2M0 1017 aa14.01□□□□□ -0.17
HLCS-207ENST00000612277 NCAPGQ9BPX3 1015 aa14.01□□□□□ -0.17
HLCS-207ENST00000612277 BAIAP2L1Q9UHR4 511 aa14.01□□□□□ -0.17
HLCS-207ENST00000612277 SPECC1L-ADORA2AF8WAN1 911 aa14.01□□□□□ -0.17
HLCS-207ENST00000612277 SMARCC2Q8TAQ2 1214 aa14.01□□□□□ -0.17
HLCS-207ENST00000612277 SMARCA2P51531 1590 aa14.01□□□□□ -0.17
HLCS-207ENST00000612277 ZNF213O14771 459 aa14.01□□□□□ -0.17
HLCS-207ENST00000612277 UAP1Q16222 522 aaPredicted RBP14.01□□□□□ -0.17
HLCS-207ENST00000612277 CCDC122Q5T0U0 273 aa14.01□□□□□ -0.17
HLCS-207ENST00000612277 TMEM87AQ8NBN3 555 aa14.01□□□□□ -0.17
HLCS-207ENST00000612277 PDS5BQ9NTI5 1447 aa14□□□□□ -0.17
HLCS-207ENST00000612277 SEL1L2Q5TEA6 688 aa14□□□□□ -0.17
HLCS-207ENST00000612277 PHLDB3Q6NSJ2 640 aa14□□□□□ -0.17
HLCS-207ENST00000612277 PDCD7Q8N8D1 485 aaKnown RBP14□□□□□ -0.17
HLCS-207ENST00000612277 CABS1Q96KC9 395 aa14□□□□□ -0.17
HLCS-207ENST00000612277 CCDC42Q96M95 316 aa14□□□□□ -0.17
HLCS-207ENST00000612277 RNF41Q9H4P4 317 aaPredicted RBP14□□□□□ -0.17
HLCS-207ENST00000612277 LZTFL1Q9NQ48 299 aa14□□□□□ -0.17
HLCS-207ENST00000612277 TAOK1Q7L7X3 1001 aa14□□□□□ -0.17
HLCS-207ENST00000612277 ATP6V0A2Q9Y487 856 aa14□□□□□ -0.17
HLCS-207ENST00000612277 SLC4A8Q2Y0W8 1093 aa14□□□□□ -0.17
HLCS-207ENST00000612277 LCA5Q86VQ0 697 aa14□□□□□ -0.17
HLCS-207ENST00000612277 Q9H521 79 aa14□□□□□ -0.17
HLCS-207ENST00000612277 PEX19P40855 299 aa14□□□□□ -0.17
HLCS-207ENST00000612277 MAP3K21Q5TCX8 1036 aa14□□□□□ -0.17
HLCS-207ENST00000612277 TRIM68Q6AZZ1 485 aa14□□□□□ -0.17
HLCS-207ENST00000612277 CCDC82Q8N4S0 544 aa14□□□□□ -0.17
HLCS-207ENST00000612277 IFIT3O14879 490 aaKnown RBP13.99□□□□□ -0.17
HLCS-207ENST00000612277 RLBP1P12271 317 aa13.99□□□□□ -0.17
HLCS-207ENST00000612277 ERCC5P28715 1186 aaPredicted RBP13.99□□□□□ -0.17
HLCS-207ENST00000612277 INF2Q27J81 1249 aa13.99□□□□□ -0.17
HLCS-207ENST00000612277 DDX21Q9NR30 783 aaKnown RBP eCLIP13.99□□□□□ -0.17
HLCS-207ENST00000612277 TMOD2Q9NZR1 351 aa13.99□□□□□ -0.17
HLCS-207ENST00000612277 TUBB2AQ13885 445 aa13.99□□□□□ -0.17
HLCS-207ENST00000612277 TUBB2BQ9BVA1 445 aa13.99□□□□□ -0.17
HLCS-207ENST00000612277 THEGQ9P2T0 379 aa13.99□□□□□ -0.17
HLCS-207ENST00000612277 MYL6BP14649 208 aa13.99□□□□□ -0.17
HLCS-207ENST00000612277 SLC8A1P32418 973 aa13.99□□□□□ -0.17
HLCS-207ENST00000612277 IGHMBP2P38935 993 aaKnown RBP13.99□□□□□ -0.17
HLCS-207ENST00000612277 CROCCP2Q86T23 111 aa13.99□□□□□ -0.17
HLCS-207ENST00000612277 DDX54Q8TDD1 881 aaKnown RBP13.99□□□□□ -0.17
HLCS-207ENST00000612277 ZSCAN22P10073 491 aaPredicted RBP13.99□□□□□ -0.17
HLCS-207ENST00000612277 CRACR2BQ8N4Y2 399 aaPredicted RBP13.99□□□□□ -0.17
HLCS-207ENST00000612277 RANBP6O60518 1105 aaKnown RBP13.98□□□□□ -0.17
HLCS-207ENST00000612277 IARSP41252 1262 aaKnown RBP13.98□□□□□ -0.17
HLCS-207ENST00000612277 RASSF2P50749 326 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms