RNA–Protein interactions for RNA: ENST00000611917.1

FAM228B-207, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 3

Gene FAM228B, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-207ENST00000611917 ANKRD36CQ5JPF3 1778 aa15.76■□□□□ 0.11
FAM228B-207ENST00000611917 ARFGEF2Q9Y6D5 1785 aa15.76■□□□□ 0.11
FAM228B-207ENST00000611917 CCDC88AQ3V6T2 1871 aa15.76■□□□□ 0.11
FAM228B-207ENST00000611917 H7C1D1 291 aa15.75■□□□□ 0.11
FAM228B-207ENST00000611917 DOK7Q18PE1 504 aa15.75■□□□□ 0.11
FAM228B-207ENST00000611917 CCDC57Q2TAC2 916 aa15.75■□□□□ 0.11
FAM228B-207ENST00000611917 SLC51AQ86UW1 340 aa15.75■□□□□ 0.11
FAM228B-207ENST00000611917 LEMD3Q9Y2U8 911 aa15.75■□□□□ 0.11
FAM228B-207ENST00000611917 RTL9Q8NET4 1388 aa15.75■□□□□ 0.11
FAM228B-207ENST00000611917 EPS15P42566 896 aa15.74■□□□□ 0.11
FAM228B-207ENST00000611917 TAF7LQ5H9L4 462 aa15.74■□□□□ 0.11
FAM228B-207ENST00000611917 ADARB2Q9NS39 739 aaKnown RBP15.74■□□□□ 0.11
FAM228B-207ENST00000611917 SMC4Q9NTJ3 1288 aa15.74■□□□□ 0.11
FAM228B-207ENST00000611917 ECE2O60344 883 aa15.73■□□□□ 0.11
FAM228B-207ENST00000611917 GMPSP49915 693 aaPredicted RBP15.73■□□□□ 0.11
FAM228B-207ENST00000611917 FOXO4P98177 505 aa15.73■□□□□ 0.11
FAM228B-207ENST00000611917 LMBR1LQ6UX01 489 aa15.73■□□□□ 0.11
FAM228B-207ENST00000611917 PODNQ7Z5L7 613 aa15.73■□□□□ 0.11
FAM228B-207ENST00000611917 CNTROBQ8N137 903 aa15.73■□□□□ 0.11
FAM228B-207ENST00000611917 DPF2Q92785 391 aa15.73■□□□□ 0.11
FAM228B-207ENST00000611917 DBNDD1Q9H9R9 158 aa15.73■□□□□ 0.11
FAM228B-207ENST00000611917 GPRC5DQ9NZD1 345 aa15.73■□□□□ 0.11
FAM228B-207ENST00000611917 CNOT7Q9UIV1 285 aaKnown RBP15.73■□□□□ 0.11
FAM228B-207ENST00000611917 HDAC5Q9UQL6 1122 aa15.73■□□□□ 0.11
FAM228B-207ENST00000611917 DICER1Q9UPY3 1922 aaKnown RBP15.72■□□□□ 0.11
FAM228B-207ENST00000611917 CACNA1SQ13698 1873 aa15.72■□□□□ 0.11
FAM228B-207ENST00000611917 WDR90Q96KV7 1748 aa15.72■□□□□ 0.11
FAM228B-207ENST00000611917 RPS12P25398 132 aaKnown RBP15.72■□□□□ 0.11
FAM228B-207ENST00000611917 CCT4P50991 539 aaKnown RBP15.72■□□□□ 0.11
FAM228B-207ENST00000611917 POTEIP0CG38 1075 aa15.71■□□□□ 0.11
FAM228B-207ENST00000611917 POTEJP0CG39 1038 aa15.71■□□□□ 0.11
FAM228B-207ENST00000611917 KCNJ4P48050 445 aa15.71■□□□□ 0.11
FAM228B-207ENST00000611917 SCNN1DP51172 638 aa15.71■□□□□ 0.11
FAM228B-207ENST00000611917 DNAJC5GQ8N7S2 189 aa15.71■□□□□ 0.11
FAM228B-207ENST00000611917 API5Q9BZZ5 524 aaKnown RBP15.71■□□□□ 0.11
FAM228B-207ENST00000611917 YDJCA8MPS7 323 aa15.7■□□□□ 0.1
FAM228B-207ENST00000611917 PSMD14O00487 310 aa15.7■□□□□ 0.1
FAM228B-207ENST00000611917 IPO8O15397 1037 aaKnown RBP15.7■□□□□ 0.1
FAM228B-207ENST00000611917 VIL1P09327 827 aaKnown RBP15.7■□□□□ 0.1
FAM228B-207ENST00000611917 BRPF1P55201 1214 aaPredicted RBP15.7■□□□□ 0.1
FAM228B-207ENST00000611917 HNRNPUQ00839 825 aaKnown RBP eCLIP15.7■□□□□ 0.1
FAM228B-207ENST00000611917 FAM161AQ3B820 660 aa15.7■□□□□ 0.1
FAM228B-207ENST00000611917 LDHAL6AQ6ZMR3 332 aa15.7■□□□□ 0.1
FAM228B-207ENST00000611917 ZC3H15Q8WU90 426 aaKnown RBP15.7■□□□□ 0.1
FAM228B-207ENST00000611917 NOB1Q9ULX3 412 aaKnown RBP15.7■□□□□ 0.1
FAM228B-207ENST00000611917 CACNA1FO60840 1977 aa15.69■□□□□ 0.1
FAM228B-207ENST00000611917 ITGBL1O95965 494 aaPredicted RBP15.69■□□□□ 0.1
FAM228B-207ENST00000611917 MAP1SQ66K74 1059 aaPredicted RBP15.69■□□□□ 0.1
FAM228B-207ENST00000611917 GPR101Q96P66 508 aaPredicted RBP15.69■□□□□ 0.1
FAM228B-207ENST00000611917 COA1Q9GZY4 146 aa15.69■□□□□ 0.1
FAM228B-207ENST00000611917 CNNM1Q9NRU3 951 aa15.69■□□□□ 0.1
FAM228B-207ENST00000611917 ZNF804BA4D1E1 1349 aa15.68■□□□□ 0.1
FAM228B-207ENST00000611917 USP17L3A6NCW0 530 aa15.68■□□□□ 0.1
FAM228B-207ENST00000611917 USP17L4A6NCW7 530 aa15.68■□□□□ 0.1
FAM228B-207ENST00000611917 NBPF7P0C2Y1 421 aaPredicted RBP15.68■□□□□ 0.1
FAM228B-207ENST00000611917 RARSP54136 660 aaKnown RBP15.68■□□□□ 0.1
FAM228B-207ENST00000611917 CHRNDQ07001 517 aa15.68■□□□□ 0.1
FAM228B-207ENST00000611917 USP17L1Q7RTZ2 530 aa15.68■□□□□ 0.1
FAM228B-207ENST00000611917 AGBL3Q8NEM8 1001 aa15.68■□□□□ 0.1
FAM228B-207ENST00000611917 ARHGAP45Q92619 1136 aa15.68■□□□□ 0.1
FAM228B-207ENST00000611917 KLRG1Q96E93 195 aa15.68■□□□□ 0.1
FAM228B-207ENST00000611917 KCNQ5Q9NR82 932 aa15.68■□□□□ 0.1
FAM228B-207ENST00000611917 CREBZFQ9NS37 354 aa15.68■□□□□ 0.1
FAM228B-207ENST00000611917 ZBTB12Q9Y330 459 aaPredicted RBP15.68■□□□□ 0.1
FAM228B-207ENST00000611917 UTYO14607 1347 aa15.68■□□□□ 0.1
FAM228B-207ENST00000611917 TMEM88BA6NKF7 163 aa15.67■□□□□ 0.1
FAM228B-207ENST00000611917 EPHA10Q5JZY3 1008 aa15.67■□□□□ 0.1
FAM228B-207ENST00000611917 SUCLG2Q96I99 432 aa15.67■□□□□ 0.1
FAM228B-207ENST00000611917 USP44Q9H0E7 712 aa15.67■□□□□ 0.1
FAM228B-207ENST00000611917 DDX60Q8IY21 1712 aaKnown RBP15.67■□□□□ 0.1
FAM228B-207ENST00000611917 TIAM2Q8IVF5 1701 aa15.66■□□□□ 0.1
FAM228B-207ENST00000611917 PLIN1O60240 522 aa15.66■□□□□ 0.1
FAM228B-207ENST00000611917 MMP14P50281 582 aa15.66■□□□□ 0.1
FAM228B-207ENST00000611917 HTRA3P83110 453 aa15.66■□□□□ 0.1
FAM228B-207ENST00000611917 MICALL2Q8IY33 904 aa15.66■□□□□ 0.1
FAM228B-207ENST00000611917 PGAP2Q9UHJ9 254 aa15.66■□□□□ 0.1
FAM228B-207ENST00000611917 LAMB2P55268 1798 aa15.65■□□□□ 0.1
FAM228B-207ENST00000611917 RBM26Q5T8P6 1007 aaKnown RBP15.65■□□□□ 0.1
FAM228B-207ENST00000611917 RSBN1LQ6PCB5 846 aaPredicted RBP15.65■□□□□ 0.1
FAM228B-207ENST00000611917 CDC37L1Q7L3B6 337 aa15.65■□□□□ 0.1
FAM228B-207ENST00000611917 HELBQ8NG08 1087 aaPredicted RBP15.65■□□□□ 0.1
FAM228B-207ENST00000611917 ZNF594Q96JF6 807 aaPredicted RBP15.65■□□□□ 0.1
FAM228B-207ENST00000611917 SCN4AP35499 1836 aa15.65■□□□□ 0.1
FAM228B-207ENST00000611917 PASKQ96RG2 1323 aa15.65■□□□□ 0.1
FAM228B-207ENST00000611917 MED23Q9ULK4 1368 aa15.64■□□□□ 0.09
FAM228B-207ENST00000611917 TAF5LO75529 589 aa15.64■□□□□ 0.09
FAM228B-207ENST00000611917 STRIP1Q5VSL9 837 aa15.64■□□□□ 0.09
FAM228B-207ENST00000611917 TTLL5Q6EMB2 1281 aa15.64■□□□□ 0.09
FAM228B-207ENST00000611917 OGFOD1Q8N543 542 aa15.64■□□□□ 0.09
FAM228B-207ENST00000611917 DCPSQ96C86 337 aaKnown RBP15.64■□□□□ 0.09
FAM228B-207ENST00000611917 BICC1Q9H694 974 aaKnown RBP15.64■□□□□ 0.09
FAM228B-207ENST00000611917 COL4A5P29400 1685 aa15.63■□□□□ 0.09
FAM228B-207ENST00000611917 WTIPA6NIX2 430 aaPredicted RBP15.63■□□□□ 0.09
FAM228B-207ENST00000611917 USP17L8P0C7I0 530 aa15.63■□□□□ 0.09
FAM228B-207ENST00000611917 UBTFL1P0CB47 393 aaPredicted RBP15.63■□□□□ 0.09
FAM228B-207ENST00000611917 HIRAP54198 1017 aaPredicted RBP15.63■□□□□ 0.09
FAM228B-207ENST00000611917 C15orf52Q6ZUT6 534 aaKnown RBP15.63■□□□□ 0.09
FAM228B-207ENST00000611917 SAMD7Q7Z3H4 446 aa15.63■□□□□ 0.09
FAM228B-207ENST00000611917 FBXW7Q969H0 707 aa15.63■□□□□ 0.09
FAM228B-207ENST00000611917 KIF16BQ96L93 1317 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms