RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 ERVV-2B6SEH9 535 aa7.46□□□□□ -1.22
SNX13-213ENST00000611725 FSIP1Q8NA03 581 aa7.46□□□□□ -1.22
SNX13-213ENST00000611725 SEC62Q99442 399 aaKnown RBP7.46□□□□□ -1.22
SNX13-213ENST00000611725 CTAGE5O15320 804 aa7.46□□□□□ -1.22
SNX13-213ENST00000611725 RAB11FIP4Q86YS3 637 aa7.46□□□□□ -1.22
SNX13-213ENST00000611725 MICU3Q86XE3 530 aa7.46□□□□□ -1.22
SNX13-213ENST00000611725 KLHL34Q8N239 644 aa7.46□□□□□ -1.22
SNX13-213ENST00000611725 UBAC1Q9BSL1 405 aa7.46□□□□□ -1.22
SNX13-213ENST00000611725 HELLSQ9NRZ9 838 aa7.46□□□□□ -1.22
SNX13-213ENST00000611725 RAI14Q9P0K7 980 aa7.46□□□□□ -1.22
SNX13-213ENST00000611725 HOOK1Q9UJC3 728 aaKnown RBP7.46□□□□□ -1.22
SNX13-213ENST00000611725 CYP21A2P08686 494 aa7.45□□□□□ -1.22
SNX13-213ENST00000611725 APOBRQ0VD83 1088 aa7.45□□□□□ -1.22
SNX13-213ENST00000611725 TTF1Q15361 905 aaPredicted RBP7.45□□□□□ -1.22
SNX13-213ENST00000611725 MTERF4Q7Z6M4 381 aaKnown RBP7.45□□□□□ -1.22
SNX13-213ENST00000611725 ANO10Q9NW15 660 aa7.45□□□□□ -1.22
SNX13-213ENST00000611725 UQCRFS1P1P0C7P4 283 aa7.45□□□□□ -1.22
SNX13-213ENST00000611725 XBP1P17861 261 aa7.45□□□□□ -1.22
SNX13-213ENST00000611725 TCIRG1Q13488 830 aa7.45□□□□□ -1.22
SNX13-213ENST00000611725 PRC1O43663 620 aa7.45□□□□□ -1.22
SNX13-213ENST00000611725 CDC37L1Q7L3B6 337 aa7.45□□□□□ -1.22
SNX13-213ENST00000611725 NSFL1CQ9UNZ2 370 aaKnown RBP7.45□□□□□ -1.22
SNX13-213ENST00000611725 TMEM131LA2VDJ0 1609 aa7.45□□□□□ -1.22
SNX13-213ENST00000611725 JAK2O60674 1132 aa7.45□□□□□ -1.22
SNX13-213ENST00000611725 POLR3DP05423 398 aaPredicted RBP7.45□□□□□ -1.22
SNX13-213ENST00000611725 CDK11BP21127 795 aaKnown RBP7.45□□□□□ -1.22
SNX13-213ENST00000611725 TYRO3Q06418 890 aa7.45□□□□□ -1.22
SNX13-213ENST00000611725 LARGE1O95461 756 aa7.45□□□□□ -1.22
SNX13-213ENST00000611725 IARSP41252 1262 aaKnown RBP7.45□□□□□ -1.22
SNX13-213ENST00000611725 CHST3Q7LGC8 479 aa7.45□□□□□ -1.22
SNX13-213ENST00000611725 NUP133Q8WUM0 1156 aa7.45□□□□□ -1.22
SNX13-213ENST00000611725 ADGRB2O60241 1585 aa7.45□□□□□ -1.22
SNX13-213ENST00000611725 NCAPD2Q15021 1401 aa7.44□□□□□ -1.22
SNX13-213ENST00000611725 RBM10P98175 930 aaKnown RBP7.44□□□□□ -1.22
SNX13-213ENST00000611725 ZNF589Q86UQ0 364 aaPredicted RBP7.44□□□□□ -1.22
SNX13-213ENST00000611725 WDR17Q8IZU2 1322 aa7.44□□□□□ -1.22
SNX13-213ENST00000611725 UQCRHLA0A096LP55 91 aa7.44□□□□□ -1.22
SNX13-213ENST00000611725 IRS4O14654 1257 aaPredicted RBP7.44□□□□□ -1.22
SNX13-213ENST00000611725 UQCRHP07919 91 aa7.44□□□□□ -1.22
SNX13-213ENST00000611725 HELBQ8NG08 1087 aaPredicted RBP7.44□□□□□ -1.22
SNX13-213ENST00000611725 GPR108Q9NPR9 543 aa7.44□□□□□ -1.22
SNX13-213ENST00000611725 CCDC69A6NI79 296 aa7.44□□□□□ -1.22
SNX13-213ENST00000611725 SMC2O95347 1197 aa7.44□□□□□ -1.22
SNX13-213ENST00000611725 ADAMTS2O95450 1211 aa7.44□□□□□ -1.22
SNX13-213ENST00000611725 VSIG10Q8N0Z9 540 aa7.44□□□□□ -1.22
SNX13-213ENST00000611725 TTC14Q96N46 770 aa7.44□□□□□ -1.22
SNX13-213ENST00000611725 SLC5A1P13866 664 aa7.44□□□□□ -1.22
SNX13-213ENST00000611725 HOMER1Q86YM7 354 aa7.44□□□□□ -1.22
SNX13-213ENST00000611725 CCDC82Q8N4S0 544 aa7.44□□□□□ -1.22
SNX13-213ENST00000611725 LEO1Q8WVC0 666 aaPredicted RBP7.44□□□□□ -1.22
SNX13-213ENST00000611725 MRPS27Q92552 414 aaKnown RBP7.44□□□□□ -1.22
SNX13-213ENST00000611725 GTF3C6Q969F1 213 aa7.44□□□□□ -1.22
SNX13-213ENST00000611725 ZNF830Q96NB3 372 aaPredicted RBP7.44□□□□□ -1.22
SNX13-213ENST00000611725 XAGE2Q96GT9 111 aa7.44□□□□□ -1.22
SNX13-213ENST00000611725 HAUS7Q99871 368 aa7.44□□□□□ -1.22
SNX13-213ENST00000611725 DNAJC25Q9H1X3 360 aa7.44□□□□□ -1.22
SNX13-213ENST00000611725 NCOA5Q9HCD5 579 aaKnown RBP7.44□□□□□ -1.22
SNX13-213ENST00000611725 IFIT3O14879 490 aaKnown RBP7.44□□□□□ -1.22
SNX13-213ENST00000611725 CCDC186Q7Z3E2 898 aa7.44□□□□□ -1.22
SNX13-213ENST00000611725 APPBP2Q92624 585 aa7.44□□□□□ -1.22
SNX13-213ENST00000611725 DSCC1Q9BVC3 393 aa7.44□□□□□ -1.22
SNX13-213ENST00000611725 FBXO3Q9UK99 471 aa7.44□□□□□ -1.22
SNX13-213ENST00000611725 CCDC196A0A1B0GTZ2 297 aa7.43□□□□□ -1.22
SNX13-213ENST00000611725 LRRC24Q50LG9 513 aa7.43□□□□□ -1.22
SNX13-213ENST00000611725 OLFM4Q6UX06 510 aa7.43□□□□□ -1.22
SNX13-213ENST00000611725 CCAR1Q8IX12 1150 aaKnown RBP7.43□□□□□ -1.22
SNX13-213ENST00000611725 STK11IPQ8N1F8 1099 aa7.43□□□□□ -1.22
SNX13-213ENST00000611725 SH3TC1Q8TE82 1336 aa7.43□□□□□ -1.22
SNX13-213ENST00000611725 MROH2AA6NES4 1674 aa7.43□□□□□ -1.22
SNX13-213ENST00000611725 GOLGA8AA7E2F4 631 aa7.43□□□□□ -1.22
SNX13-213ENST00000611725 WASF1Q92558 559 aa7.43□□□□□ -1.22
SNX13-213ENST00000611725 BTG4Q9NY30 223 aa7.43□□□□□ -1.22
SNX13-213ENST00000611725 NUTM2BA6NNL0 878 aaPredicted RBP7.43□□□□□ -1.22
SNX13-213ENST00000611725 NUTM2EB1AL46 878 aaPredicted RBP7.43□□□□□ -1.22
SNX13-213ENST00000611725 H7C1W4 665 aa7.43□□□□□ -1.22
SNX13-213ENST00000611725 NOLC1Q14978 699 aaKnown RBP eCLIP7.43□□□□□ -1.22
SNX13-213ENST00000611725 NUTM2AQ8IVF1 878 aaPredicted RBP7.43□□□□□ -1.22
SNX13-213ENST00000611725 CCDC112Q8NEF3 446 aa7.43□□□□□ -1.22
SNX13-213ENST00000611725 LLPHQ9BRT6 129 aaKnown RBP7.43□□□□□ -1.22
SNX13-213ENST00000611725 SLC12A7Q9Y666 1083 aa7.43□□□□□ -1.22
SNX13-213ENST00000611725 SLC3A2P08195 630 aaKnown RBP7.43□□□□□ -1.22
SNX13-213ENST00000611725 ANO6Q4KMQ2 910 aa7.43□□□□□ -1.22
SNX13-213ENST00000611725 NAA16Q6N069 864 aaPredicted RBP7.43□□□□□ -1.22
SNX13-213ENST00000611725 DZIP3Q86Y13 1208 aaKnown RBP7.43□□□□□ -1.22
SNX13-213ENST00000611725 RNF41Q9H4P4 317 aaPredicted RBP7.43□□□□□ -1.22
SNX13-213ENST00000611725 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.43□□□□□ -1.22
SNX13-213ENST00000611725 METAP2P50579 478 aaKnown RBP eCLIP7.43□□□□□ -1.22
SNX13-213ENST00000611725 TPD52L1Q16890 204 aaPredicted RBP7.43□□□□□ -1.22
SNX13-213ENST00000611725 TTLL5Q6EMB2 1281 aa7.43□□□□□ -1.22
SNX13-213ENST00000611725 BICDL1Q6ZP65 573 aa7.43□□□□□ -1.22
SNX13-213ENST00000611725 PUS3Q9BZE2 481 aaKnown RBP7.43□□□□□ -1.22
SNX13-213ENST00000611725 PDCL3Q9H2J4 239 aa7.43□□□□□ -1.22
SNX13-213ENST00000611725 CLIP2Q9UDT6 1046 aa7.43□□□□□ -1.22
SNX13-213ENST00000611725 HSPD1P10809 573 aaKnown RBP7.42□□□□□ -1.22
SNX13-213ENST00000611725 ITGA6P23229 1130 aa7.42□□□□□ -1.22
SNX13-213ENST00000611725 SFPQP23246 707 aaKnown RBP eCLIP7.42□□□□□ -1.22
SNX13-213ENST00000611725 GIGYF2Q6Y7W6 1299 aaKnown RBP7.42□□□□□ -1.22
SNX13-213ENST00000611725 LUZP1Q86V48 1076 aa7.42□□□□□ -1.22
SNX13-213ENST00000611725 KCNG4Q8TDN1 519 aa7.42□□□□□ -1.22
SNX13-213ENST00000611725 SPATA31A3Q5VYP0 1347 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms