RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 STOX1Q6ZVD7 989 aa17.78■□□□□ 0.44
PCDHGB1-202ENST00000611598 RIC3Q7Z5B4 369 aa17.78■□□□□ 0.44
PCDHGB1-202ENST00000611598 DDX21Q9NR30 783 aaKnown RBP eCLIP17.78■□□□□ 0.44
PCDHGB1-202ENST00000611598 CFAP45Q9UL16 551 aa17.78■□□□□ 0.44
PCDHGB1-202ENST00000611598 ARHGAP23Q9P227 1491 aa17.78■□□□□ 0.44
PCDHGB1-202ENST00000611598 FILIP1Q7Z7B0 1213 aa17.77■□□□□ 0.44
PCDHGB1-202ENST00000611598 DNAJC2Q99543 621 aaKnown RBP17.77■□□□□ 0.44
PCDHGB1-202ENST00000611598 ZSCAN16Q9H4T2 348 aaPredicted RBP17.77■□□□□ 0.44
PCDHGB1-202ENST00000611598 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.77■□□□□ 0.44
PCDHGB1-202ENST00000611598 V9GYY5 206 aaPredicted RBP17.77■□□□□ 0.44
PCDHGB1-202ENST00000611598 DDX58O95786 925 aaKnown RBP17.77■□□□□ 0.43
PCDHGB1-202ENST00000611598 MYL6BP14649 208 aa17.77■□□□□ 0.43
PCDHGB1-202ENST00000611598 STX1AQ16623 288 aa17.77■□□□□ 0.43
PCDHGB1-202ENST00000611598 FBXW7Q969H0 707 aa17.77■□□□□ 0.43
PCDHGB1-202ENST00000611598 NEURL1BA8MQ27 555 aa17.76■□□□□ 0.43
PCDHGB1-202ENST00000611598 KIF20AO95235 890 aa17.76■□□□□ 0.43
PCDHGB1-202ENST00000611598 CTDNEP1O95476 244 aa17.76■□□□□ 0.43
PCDHGB1-202ENST00000611598 SKILP12757 684 aa17.76■□□□□ 0.43
PCDHGB1-202ENST00000611598 SNW1Q13573 536 aaKnown RBP17.76■□□□□ 0.43
PCDHGB1-202ENST00000611598 SLFNL1Q499Z3 407 aa17.76■□□□□ 0.43
PCDHGB1-202ENST00000611598 MRFAP1L1Q96HT8 127 aa17.76■□□□□ 0.43
PCDHGB1-202ENST00000611598 USP28Q96RU2 1077 aa17.76■□□□□ 0.43
PCDHGB1-202ENST00000611598 TRMT1Q9NXH9 659 aaKnown RBP17.76■□□□□ 0.43
PCDHGB1-202ENST00000611598 CAVIN2O95810 425 aa17.76■□□□□ 0.43
PCDHGB1-202ENST00000611598 TFCP2Q12800 502 aa17.76■□□□□ 0.43
PCDHGB1-202ENST00000611598 DHX40Q8IX18 779 aaKnown RBP17.76■□□□□ 0.43
PCDHGB1-202ENST00000611598 NSUN7Q8NE18 718 aaKnown RBP17.76■□□□□ 0.43
PCDHGB1-202ENST00000611598 SMARCC2Q8TAQ2 1214 aa17.76■□□□□ 0.43
PCDHGB1-202ENST00000611598 CCDC9Q9Y3X0 531 aaKnown RBP17.76■□□□□ 0.43
PCDHGB1-202ENST00000611598 MRC1P22897 1456 aa17.75■□□□□ 0.43
PCDHGB1-202ENST00000611598 ATP5JP18859 108 aa17.75■□□□□ 0.43
PCDHGB1-202ENST00000611598 RBM6P78332 1123 aaKnown RBP17.75■□□□□ 0.43
PCDHGB1-202ENST00000611598 CCZ1BP86790 482 aa17.75■□□□□ 0.43
PCDHGB1-202ENST00000611598 CCZ1P86791 482 aaPredicted RBP17.75■□□□□ 0.43
PCDHGB1-202ENST00000611598 FGD1P98174 961 aa17.75■□□□□ 0.43
PCDHGB1-202ENST00000611598 SLC39A6Q13433 755 aa17.75■□□□□ 0.43
PCDHGB1-202ENST00000611598 TNNI3KQ59H18 835 aa17.75■□□□□ 0.43
PCDHGB1-202ENST00000611598 DDX46Q7L014 1031 aaKnown RBP17.75■□□□□ 0.43
PCDHGB1-202ENST00000611598 CGNQ9P2M7 1197 aaKnown RBP17.75■□□□□ 0.43
PCDHGB1-202ENST00000611598 DDX41Q9UJV9 622 aaKnown RBP17.75■□□□□ 0.43
PCDHGB1-202ENST00000611598 ZNF215Q9UL58 517 aaPredicted RBP17.75■□□□□ 0.43
PCDHGB1-202ENST00000611598 FPGT-TNNI3KV9GXZ4 949 aa17.75■□□□□ 0.43
PCDHGB1-202ENST00000611598 CCDC69A6NI79 296 aa17.75■□□□□ 0.43
PCDHGB1-202ENST00000611598 GCKRQ14397 625 aa17.75■□□□□ 0.43
PCDHGB1-202ENST00000611598 AMOTQ4VCS5 1084 aa17.75■□□□□ 0.43
PCDHGB1-202ENST00000611598 NYAP1Q6ZVC0 841 aa17.75■□□□□ 0.43
PCDHGB1-202ENST00000611598 RCOR1Q9UKL0 485 aa17.75■□□□□ 0.43
PCDHGB1-202ENST00000611598 BECN2A8MW95 431 aa17.74■□□□□ 0.43
PCDHGB1-202ENST00000611598 GUCY1B3Q02153 619 aa17.74■□□□□ 0.43
PCDHGB1-202ENST00000611598 APOBRQ0VD83 1088 aa17.74■□□□□ 0.43
PCDHGB1-202ENST00000611598 MYD88Q99836 296 aa17.74■□□□□ 0.43
PCDHGB1-202ENST00000611598 DBNDD2Q9BQY9 259 aa17.74■□□□□ 0.43
PCDHGB1-202ENST00000611598 U3KPZ7 1027 aaPredicted RBP17.74■□□□□ 0.43
PCDHGB1-202ENST00000611598 A0A0G2JLW4 131 aa17.74■□□□□ 0.43
PCDHGB1-202ENST00000611598 PTPDC1A2A3K4 754 aa17.74■□□□□ 0.43
PCDHGB1-202ENST00000611598 CCT2P78371 535 aaKnown RBP17.74■□□□□ 0.43
PCDHGB1-202ENST00000611598 PTPN14Q15678 1187 aa17.74■□□□□ 0.43
PCDHGB1-202ENST00000611598 NCOA5Q9HCD5 579 aaKnown RBP17.74■□□□□ 0.43
PCDHGB1-202ENST00000611598 PFKFB2O60825 505 aa17.73■□□□□ 0.43
PCDHGB1-202ENST00000611598 XAGE3Q8WTP9 111 aa17.73■□□□□ 0.43
PCDHGB1-202ENST00000611598 RFX5P48382 616 aaPredicted RBP17.73■□□□□ 0.43
PCDHGB1-202ENST00000611598 PIP4K2AP48426 406 aaPredicted RBP17.73■□□□□ 0.43
PCDHGB1-202ENST00000611598 PTPN12Q05209 780 aaKnown RBP17.73■□□□□ 0.43
PCDHGB1-202ENST00000611598 MCMDC2Q4G0Z9 681 aa17.73■□□□□ 0.43
PCDHGB1-202ENST00000611598 CCDC73Q6ZRK6 1079 aa17.73■□□□□ 0.43
PCDHGB1-202ENST00000611598 AOPEPQ8N6M6 819 aa17.73■□□□□ 0.43
PCDHGB1-202ENST00000611598 ENGASEQ8NFI3 743 aa17.73■□□□□ 0.43
PCDHGB1-202ENST00000611598 KIF18AQ8NI77 898 aa17.73■□□□□ 0.43
PCDHGB1-202ENST00000611598 FER1L4A9Z1Z3 1794 aa17.72■□□□□ 0.43
PCDHGB1-202ENST00000611598 CTAGE5O15320 804 aa17.72■□□□□ 0.43
PCDHGB1-202ENST00000611598 KMT5BQ4FZB7 885 aa17.72■□□□□ 0.43
PCDHGB1-202ENST00000611598 ILDR1Q86SU0 546 aaPredicted RBP17.72■□□□□ 0.43
PCDHGB1-202ENST00000611598 NCAPD2Q15021 1401 aa17.72■□□□□ 0.43
PCDHGB1-202ENST00000611598 KINO60870 393 aaKnown RBP17.72■□□□□ 0.43
PCDHGB1-202ENST00000611598 NEXNQ0ZGT2 675 aa17.72■□□□□ 0.43
PCDHGB1-202ENST00000611598 NAA16Q6N069 864 aaPredicted RBP17.72■□□□□ 0.43
PCDHGB1-202ENST00000611598 COPS6Q7L5N1 327 aa17.72■□□□□ 0.43
PCDHGB1-202ENST00000611598 FSIP1Q8NA03 581 aa17.72■□□□□ 0.43
PCDHGB1-202ENST00000611598 COPRSQ9NQ92 184 aa17.72■□□□□ 0.43
PCDHGB1-202ENST00000611598 NAP1L2Q9ULW6 460 aaPredicted RBP17.71■□□□□ 0.43
PCDHGB1-202ENST00000611598 ADAMTSL3P82987 1691 aa17.71■□□□□ 0.43
PCDHGB1-202ENST00000611598 NEMFO60524 1076 aa17.71■□□□□ 0.43
PCDHGB1-202ENST00000611598 ME1P48163 572 aa17.71■□□□□ 0.43
PCDHGB1-202ENST00000611598 FAM160A1Q05DH4 1040 aa17.71■□□□□ 0.43
PCDHGB1-202ENST00000611598 PSME1Q06323 249 aa17.71■□□□□ 0.43
PCDHGB1-202ENST00000611598 CCAR2Q8N163 923 aaKnown RBP17.71■□□□□ 0.43
PCDHGB1-202ENST00000611598 LLPHQ9BRT6 129 aaKnown RBP17.71■□□□□ 0.43
PCDHGB1-202ENST00000611598 ERBB3P21860 1342 aa17.71■□□□□ 0.42
PCDHGB1-202ENST00000611598 CHST3Q7LGC8 479 aa17.7■□□□□ 0.42
PCDHGB1-202ENST00000611598 ELF2Q15723 593 aa17.7■□□□□ 0.42
PCDHGB1-202ENST00000611598 DHX32Q7L7V1 743 aaKnown RBP17.7■□□□□ 0.42
PCDHGB1-202ENST00000611598 NBPF11Q86T75 865 aa17.7■□□□□ 0.42
PCDHGB1-202ENST00000611598 KCNH5Q8NCM2 988 aa17.7■□□□□ 0.42
PCDHGB1-202ENST00000611598 ANKRD24Q8TF21 1146 aa17.7■□□□□ 0.42
PCDHGB1-202ENST00000611598 HAUS7Q99871 368 aa17.7■□□□□ 0.42
PCDHGB1-202ENST00000611598 ANO10Q9NW15 660 aa17.7■□□□□ 0.42
PCDHGB1-202ENST00000611598 MORC2Q9Y6X9 1032 aaPredicted RBP17.7■□□□□ 0.42
PCDHGB1-202ENST00000611598 MYH15Q9Y2K3 1946 aa17.69■□□□□ 0.42
PCDHGB1-202ENST00000611598 ZNF771Q7L3S4 317 aaPredicted RBP17.69■□□□□ 0.42
PCDHGB1-202ENST00000611598 UBE3BQ7Z3V4 1068 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms